RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	LOC107984640	A0A0U1RRK4	108 aa		11.63	□□□□□ -0.55
MACF1-233	ENST00000602421	LCE6A	A0A183	80 aa		11.62	□□□□□ -0.55
MACF1-233	ENST00000602421	NDUFC2	O95298	119 aa		11.62	□□□□□ -0.55
MACF1-233	ENST00000602421	PGPEP1	Q9NXJ5	209 aa		11.6	□□□□□ -0.55
MACF1-233	ENST00000602421	TRAV13-2	A0A0B4J235	113 aa		11.6	□□□□□ -0.55
MACF1-233	ENST00000602421	C9orf118	A6NHY6	69 aa		11.6	□□□□□ -0.55
MACF1-233	ENST00000602421	GAGE2B	Q13066	116 aa		11.6	□□□□□ -0.55
MACF1-233	ENST00000602421	IGKV2-28	A0A075B6P5	120 aa		11.59	□□□□□ -0.55
MACF1-233	ENST00000602421	IGKV2D-28	P01615	120 aa		11.59	□□□□□ -0.55
MACF1-233	ENST00000602421	RPL13A	P40429	203 aa	Known RBP	11.59	□□□□□ -0.55
MACF1-233	ENST00000602421		H3BUT2	72 aa		11.58	□□□□□ -0.56
MACF1-233	ENST00000602421		H7C2G1	150 aa		11.58	□□□□□ -0.56
MACF1-233	ENST00000602421	C9orf163	Q8N9P6	203 aa		11.58	□□□□□ -0.56
MACF1-233	ENST00000602421	NAA38	Q9BRA0	125 aa	Known RBP	11.58	□□□□□ -0.56
MACF1-233	ENST00000602421	PKIG	Q9Y2B9	76 aa		11.58	□□□□□ -0.56
MACF1-233	ENST00000602421	RTL8C	O15255	209 aa		11.57	□□□□□ -0.56
MACF1-233	ENST00000602421	TSPAN13	O95857	204 aa		11.57	□□□□□ -0.56
MACF1-233	ENST00000602421	PRR3	P79522	188 aa	Known RBP	11.57	□□□□□ -0.56
MACF1-233	ENST00000602421		Q1RN00	199 aa		11.57	□□□□□ -0.56
MACF1-233	ENST00000602421	TNP2	Q05952	138 aa		11.56	□□□□□ -0.56
MACF1-233	ENST00000602421	C9orf129	Q5T035	196 aa	Known RBP	11.56	□□□□□ -0.56
MACF1-233	ENST00000602421	LINC00337	Q8N6G1	96 aa		11.56	□□□□□ -0.56
MACF1-233	ENST00000602421		Q8NDZ9	215 aa		11.56	□□□□□ -0.56
MACF1-233	ENST00000602421	NCR3	O14931	201 aa		11.55	□□□□□ -0.56
MACF1-233	ENST00000602421	OR13C6P	Q8NH95	151 aa		11.55	□□□□□ -0.56
MACF1-233	ENST00000602421	DNAH2	Q9P225	4427 aa		11.54	□□□□□ -0.56
MACF1-233	ENST00000602421		A0A1B0GV90	55 aa		11.54	□□□□□ -0.56
MACF1-233	ENST00000602421	C16orf90	A8MZG2	172 aa		11.53	□□□□□ -0.56
MACF1-233	ENST00000602421	VPREB1	P12018	145 aa		11.53	□□□□□ -0.56
MACF1-233	ENST00000602421	TRBV10-2	A0A0K0K1G8	114 aa		11.52	□□□□□ -0.56
MACF1-233	ENST00000602421	PSMB2	P49721	201 aa		11.52	□□□□□ -0.56
MACF1-233	ENST00000602421		A0A096LNI7	61 aa		11.52	□□□□□ -0.57
MACF1-233	ENST00000602421		A0A1W2PPM0	123 aa		11.52	□□□□□ -0.57
MACF1-233	ENST00000602421	PLA2G2D	Q9UNK4	145 aa		11.52	□□□□□ -0.57
MACF1-233	ENST00000602421	IGKV2-24	A0A0C4DH68	120 aa		11.51	□□□□□ -0.57
MACF1-233	ENST00000602421	S100A7L2	Q5SY68	101 aa		11.51	□□□□□ -0.57
MACF1-233	ENST00000602421	DNAH17	Q9UFH2	4485 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421	HYDIN	Q4G0P3	5121 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421	IGLV5-52	A0A0A0MRZ9	124 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421	FABP2	P12104	132 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421	VAMP3	Q15836	100 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421	LINC01620	Q4KN68	170 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421	SDIM1	Q6ZPB5	146 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421	TMEM126A	Q9H061	195 aa		11.5	□□□□□ -0.57
MACF1-233	ENST00000602421		M0R378	163 aa		11.49	□□□□□ -0.57
MACF1-233	ENST00000602421	NKAPP1	Q8N9T2	125 aa		11.49	□□□□□ -0.57
MACF1-233	ENST00000602421	SACS	Q9NZJ4	4579 aa		11.49	□□□□□ -0.57
MACF1-233	ENST00000602421	SCGB1C2	P0DMR2	95 aa		11.48	□□□□□ -0.57
MACF1-233	ENST00000602421	FUS	P35637	526 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
MACF1-233	ENST00000602421	SERTAD4-AS1	Q5TG53	156 aa		11.48	□□□□□ -0.57
MACF1-233	ENST00000602421	FAM168B	A1KXE4	195 aa		11.47	□□□□□ -0.57
MACF1-233	ENST00000602421	LYRM7	Q5U5X0	104 aa		11.47	□□□□□ -0.57
MACF1-233	ENST00000602421	IGLV5-37	A0A075B6J1	123 aa		11.46	□□□□□ -0.57
MACF1-233	ENST00000602421	LINC00474	Q9P2X8	69 aa		11.46	□□□□□ -0.57
MACF1-233	ENST00000602421	TRIAP1	O43715	76 aa		11.45	□□□□□ -0.58
MACF1-233	ENST00000602421	COX6C	P09669	75 aa		11.45	□□□□□ -0.58
MACF1-233	ENST00000602421	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.45	□□□□□ -0.58
MACF1-233	ENST00000602421	SMIM11B	Q8TCY0	68 aa		11.45	□□□□□ -0.58
MACF1-233	ENST00000602421	IGLV6-57	P01721	117 aa		11.44	□□□□□ -0.58
MACF1-233	ENST00000602421	CHTF8	P0CG12	524 aa		11.44	□□□□□ -0.58
MACF1-233	ENST00000602421	RPL28	P46779	137 aa	Known RBP	11.44	□□□□□ -0.58
MACF1-233	ENST00000602421	TRBV10-3	A0A0K0K1G6	114 aa		11.43	□□□□□ -0.58
MACF1-233	ENST00000602421	SPCS1	Q9Y6A9	102 aa		11.43	□□□□□ -0.58
MACF1-233	ENST00000602421	FRAS1	Q86XX4	4008 aa		11.43	□□□□□ -0.58
MACF1-233	ENST00000602421	LINC00336	Q6ZUF6	198 aa		11.43	□□□□□ -0.58
MACF1-233	ENST00000602421	C22orf24	Q9Y442	160 aa		11.43	□□□□□ -0.58
MACF1-233	ENST00000602421	GAGE10	A6NGK3	116 aa		11.42	□□□□□ -0.58
MACF1-233	ENST00000602421	KRTAP7-1	Q8IUC3	87 aa		11.42	□□□□□ -0.58
MACF1-233	ENST00000602421	C7orf33	Q8WU49	177 aa		11.42	□□□□□ -0.58
MACF1-233	ENST00000602421	DPH3	Q96FX2	82 aa		11.42	□□□□□ -0.58
MACF1-233	ENST00000602421		A0A1W2PNN7	141 aa		11.41	□□□□□ -0.58
MACF1-233	ENST00000602421	GTF2H5	Q6ZYL4	71 aa		11.41	□□□□□ -0.58
MACF1-233	ENST00000602421	CBY1	Q9Y3M2	126 aa		11.41	□□□□□ -0.58
MACF1-233	ENST00000602421		K7EP34	96 aa		11.4	□□□□□ -0.58
MACF1-233	ENST00000602421	KRTAP10-2	P60368	255 aa		11.4	□□□□□ -0.58
MACF1-233	ENST00000602421	TRAV23DV6	A0A075B6W5	121 aa		11.39	□□□□□ -0.59
MACF1-233	ENST00000602421		M0QXV9	152 aa		11.39	□□□□□ -0.59
MACF1-233	ENST00000602421	MRPL55	Q7Z7F7	128 aa	Known RBP	11.39	□□□□□ -0.59
MACF1-233	ENST00000602421	TRBV20-1	A0A075B6N2	111 aa		11.38	□□□□□ -0.59
MACF1-233	ENST00000602421	LINC00167	Q96N53	147 aa		11.38	□□□□□ -0.59
MACF1-233	ENST00000602421	PANO1	I0J062	215 aa		11.37	□□□□□ -0.59
MACF1-233	ENST00000602421	SPACA4	Q8TDM5	124 aa		11.37	□□□□□ -0.59
MACF1-233	ENST00000602421	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.37	□□□□□ -0.59
MACF1-233	ENST00000602421	TCL1B	O95988	128 aa		11.36	□□□□□ -0.59
MACF1-233	ENST00000602421	HECTD4	Q9Y4D8	3996 aa		11.36	□□□□□ -0.59
MACF1-233	ENST00000602421		H0YGX0	51 aa		11.35	□□□□□ -0.59
MACF1-233	ENST00000602421	UBE2V1	Q13404	147 aa		11.35	□□□□□ -0.59
MACF1-233	ENST00000602421	C6orf99	Q4VX62	202 aa		11.35	□□□□□ -0.59
MACF1-233	ENST00000602421	RPL37AP8	A6NKH3	93 aa		11.35	□□□□□ -0.59
MACF1-233	ENST00000602421	ATXN8	Q156A1	80 aa		11.35	□□□□□ -0.59
MACF1-233	ENST00000602421	CLEC2B	Q92478	149 aa		11.35	□□□□□ -0.59
MACF1-233	ENST00000602421	DIRC1	Q969H9	104 aa		11.35	□□□□□ -0.59
MACF1-233	ENST00000602421	IGLV1-50	A0A075B6I6	118 aa		11.34	□□□□□ -0.59
MACF1-233	ENST00000602421	ZNF73	O43830	326 aa	Predicted RBP	11.34	□□□□□ -0.59
MACF1-233	ENST00000602421	KCNQ1DN	Q9H478	68 aa		11.34	□□□□□ -0.59
MACF1-233	ENST00000602421	FAT2	Q9NYQ8	4349 aa		11.33	□□□□□ -0.6
MACF1-233	ENST00000602421	RYR2	Q92736	4967 aa		11.32	□□□□□ -0.6
MACF1-233	ENST00000602421	DNAH11	Q96DT5	4516 aa		11.32	□□□□□ -0.6
MACF1-233	ENST00000602421		H3BMG7	143 aa		11.32	□□□□□ -0.6
MACF1-233	ENST00000602421		A0A087WYN8	130 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms