RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 VAMP3Q15836 100 aa7.59□□□□□ -1.19
ZNF548-211ENST00000600927 C15orf56Q8N910 161 aa7.59□□□□□ -1.19
ZNF548-211ENST00000600927 PGPEP1Q9NXJ5 209 aa7.59□□□□□ -1.19
ZNF548-211ENST00000600927 PFN2P35080 140 aa7.58□□□□□ -1.2
ZNF548-211ENST00000600927 UNQ6190/PRO20217Q6UXQ8 127 aa7.58□□□□□ -1.2
ZNF548-211ENST00000600927 SOSTDC1Q6X4U4 206 aa7.58□□□□□ -1.2
ZNF548-211ENST00000600927 DAND5Q8N907 189 aa7.58□□□□□ -1.2
ZNF548-211ENST00000600927 HSPG2P98160 4391 aa7.57□□□□□ -1.2
ZNF548-211ENST00000600927 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
ZNF548-211ENST00000600927 GAGE10A6NGK3 116 aa7.57□□□□□ -1.2
ZNF548-211ENST00000600927 TSPAN13O95857 204 aa7.57□□□□□ -1.2
ZNF548-211ENST00000600927 CAMK2N2Q96S95 79 aa7.57□□□□□ -1.2
ZNF548-211ENST00000600927 Q9HAA7 133 aa7.57□□□□□ -1.2
ZNF548-211ENST00000600927 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
ZNF548-211ENST00000600927 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
ZNF548-211ENST00000600927 EIF4EBP3O60516 100 aaPredicted RBP7.56□□□□□ -1.2
ZNF548-211ENST00000600927 K7EP34 96 aa7.55□□□□□ -1.2
ZNF548-211ENST00000600927 COX6CP09669 75 aa7.55□□□□□ -1.2
ZNF548-211ENST00000600927 TLX1NBP0CAT3 122 aa7.55□□□□□ -1.2
ZNF548-211ENST00000600927 SYCNQ0VAF6 134 aa7.55□□□□□ -1.2
ZNF548-211ENST00000600927 C14orf177Q52M58 125 aa7.55□□□□□ -1.2
ZNF548-211ENST00000600927 C10orf25Q5T742 122 aa7.55□□□□□ -1.2
ZNF548-211ENST00000600927 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
ZNF548-211ENST00000600927 NPC2P61916 151 aa7.54□□□□□ -1.2
ZNF548-211ENST00000600927 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
ZNF548-211ENST00000600927 USP17L23D6RBM5 183 aa7.53□□□□□ -1.2
ZNF548-211ENST00000600927 NDUFC2-KCTD14E9PQ53 114 aa7.53□□□□□ -1.2
ZNF548-211ENST00000600927 KRTAP10-2P60368 255 aa7.53□□□□□ -1.2
ZNF548-211ENST00000600927 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
ZNF548-211ENST00000600927 TRBV10-2A0A0K0K1G8 114 aa7.52□□□□□ -1.21
ZNF548-211ENST00000600927 Q6ZRU5 148 aa7.52□□□□□ -1.21
ZNF548-211ENST00000600927 IGKV2-28A0A075B6P5 120 aa7.51□□□□□ -1.21
ZNF548-211ENST00000600927 A0A087WTM6 91 aa7.51□□□□□ -1.21
ZNF548-211ENST00000600927 IGKV2D-28P01615 120 aa7.51□□□□□ -1.21
ZNF548-211ENST00000600927 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
ZNF548-211ENST00000600927 RPL28P46779 137 aaKnown RBP7.51□□□□□ -1.21
ZNF548-211ENST00000600927 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
ZNF548-211ENST00000600927 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
ZNF548-211ENST00000600927 PCLOQ9Y6V0 5065 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 ABCA13Q86UQ4 5058 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 LRCOL1A6NCL2 159 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 C16orf90A8MZG2 172 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 PSCAO43653 123 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 SCGB1C2P0DMR2 95 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 PSMB2P49721 201 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 Q1RN00 199 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 CARD19Q96LW7 228 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 NAA38Q9BRA0 125 aaKnown RBP7.5□□□□□ -1.21
ZNF548-211ENST00000600927 TMEM126AQ9H061 195 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 PKIGQ9Y2B9 76 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 CBY1Q9Y3M2 126 aa7.5□□□□□ -1.21
ZNF548-211ENST00000600927 CNBPP62633 177 aaKnown RBP7.49□□□□□ -1.21
ZNF548-211ENST00000600927 LINC00337Q8N6G1 96 aa7.49□□□□□ -1.21
ZNF548-211ENST00000600927 PLA2G2DQ9UNK4 145 aa7.49□□□□□ -1.21
ZNF548-211ENST00000600927 DNAH8Q96JB1 4490 aa7.48□□□□□ -1.21
ZNF548-211ENST00000600927 F8W1H4 67 aa7.48□□□□□ -1.21
ZNF548-211ENST00000600927 CDK2AP2O75956 126 aa7.48□□□□□ -1.21
ZNF548-211ENST00000600927 H0YGX0 51 aa7.47□□□□□ -1.21
ZNF548-211ENST00000600927 TRIAP1O43715 76 aa7.47□□□□□ -1.21
ZNF548-211ENST00000600927 H7C2G1 150 aa7.46□□□□□ -1.22
ZNF548-211ENST00000600927 SLPIP03973 132 aa7.46□□□□□ -1.22
ZNF548-211ENST00000600927 ATXN8Q156A1 80 aa7.46□□□□□ -1.22
ZNF548-211ENST00000600927 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
ZNF548-211ENST00000600927 M0QXV9 152 aa7.45□□□□□ -1.22
ZNF548-211ENST00000600927 Q6ZRP5 223 aa7.45□□□□□ -1.22
ZNF548-211ENST00000600927 LINC01600Q96MT4 127 aa7.45□□□□□ -1.22
ZNF548-211ENST00000600927 M0R378 163 aa7.44□□□□□ -1.22
ZNF548-211ENST00000600927 TCL1BO95988 128 aa7.44□□□□□ -1.22
ZNF548-211ENST00000600927 WFDC2Q14508 124 aa7.44□□□□□ -1.22
ZNF548-211ENST00000600927 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
ZNF548-211ENST00000600927 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
ZNF548-211ENST00000600927 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 A0A1B0GX51 115 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 H3BMG7 143 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 LST1O00453 97 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 IGLV6-57P01721 117 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 VPREB1P12018 145 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 FUSP35637 526 aaKnown RBP eCLIP7.43□□□□□ -1.22
ZNF548-211ENST00000600927 Q8N814 137 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 SMIM11BQ8TCY0 68 aa7.43□□□□□ -1.22
ZNF548-211ENST00000600927 TRACP01848 142 aa7.42□□□□□ -1.22
ZNF548-211ENST00000600927 S100A7L2Q5SY68 101 aa7.42□□□□□ -1.22
ZNF548-211ENST00000600927 FAT1Q14517 4588 aa7.41□□□□□ -1.22
ZNF548-211ENST00000600927 XAGE1AQ9HD64 81 aa7.41□□□□□ -1.22
ZNF548-211ENST00000600927 PRO0461Q9UI25 63 aa7.41□□□□□ -1.22
ZNF548-211ENST00000600927 TRBV7-6A0A0J9YX20 115 aa7.4□□□□□ -1.22
ZNF548-211ENST00000600927 SNCGO76070 127 aa7.4□□□□□ -1.22
ZNF548-211ENST00000600927 KRTAP10-1P60331 282 aa7.4□□□□□ -1.22
ZNF548-211ENST00000600927 LINC01620Q4KN68 170 aa7.4□□□□□ -1.22
ZNF548-211ENST00000600927 GAGE2EQ4V326 116 aa7.4□□□□□ -1.22
ZNF548-211ENST00000600927 C9orf129Q5T035 196 aaKnown RBP7.4□□□□□ -1.22
ZNF548-211ENST00000600927 C9orf163Q8N9P6 203 aa7.4□□□□□ -1.22
ZNF548-211ENST00000600927 GAGE2DQ9UEU5 116 aa7.4□□□□□ -1.22
ZNF548-211ENST00000600927 LECT2O14960 151 aa7.39□□□□□ -1.23
ZNF548-211ENST00000600927 PRR3P79522 188 aaKnown RBP7.39□□□□□ -1.23
ZNF548-211ENST00000600927 RPL18AQ02543 176 aaKnown RBP7.39□□□□□ -1.23
ZNF548-211ENST00000600927 Q8NDZ9 215 aa7.39□□□□□ -1.23
ZNF548-211ENST00000600927 H3BT86 120 aa7.38□□□□□ -1.23
ZNF548-211ENST00000600927 XGP55808 180 aa7.38□□□□□ -1.23
ZNF548-211ENST00000600927 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms