RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 UNQ6190/PRO20217Q6UXQ8 127 aa12.64□□□□□ -0.39
ARHGEF1-221ENST00000600387 LYRM9A8MSI8 78 aa12.63□□□□□ -0.39
ARHGEF1-221ENST00000600387 C10orf25Q5T742 122 aa12.63□□□□□ -0.39
ARHGEF1-221ENST00000600387 ZNF843Q8N446 348 aa12.63□□□□□ -0.39
ARHGEF1-221ENST00000600387 CENPEQ02224 2701 aa12.63□□□□□ -0.39
ARHGEF1-221ENST00000600387 CUBNO60494 3623 aa12.63□□□□□ -0.39
ARHGEF1-221ENST00000600387 TRAV10A0A0B4J240 114 aa12.62□□□□□ -0.39
ARHGEF1-221ENST00000600387 Q8N3U1 123 aa12.62□□□□□ -0.39
ARHGEF1-221ENST00000600387 NF1P21359 2839 aa12.61□□□□□ -0.39
ARHGEF1-221ENST00000600387 CYSRT1A8MQ03 144 aa12.6□□□□□ -0.39
ARHGEF1-221ENST00000600387 DIRC1Q969H9 104 aa12.6□□□□□ -0.39
ARHGEF1-221ENST00000600387 SONP18583 2426 aaKnown RBP12.6□□□□□ -0.39
ARHGEF1-221ENST00000600387 NIPBLQ6KC79 2804 aaeCLIP12.6□□□□□ -0.39
ARHGEF1-221ENST00000600387 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF1-221ENST00000600387 SPATA3Q8NHX4 192 aa12.59□□□□□ -0.39
ARHGEF1-221ENST00000600387 TRBV7-4A0A0J9YYF1 115 aa12.58□□□□□ -0.4
ARHGEF1-221ENST00000600387 GVQW2A0A096LPI5 108 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF1-221ENST00000600387 ABCA12Q86UK0 2595 aa12.57□□□□□ -0.4
ARHGEF1-221ENST00000600387 ZNF469Q96JG9 3925 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF1-221ENST00000600387 FN1P02751 2386 aaKnown RBP12.56□□□□□ -0.4
ARHGEF1-221ENST00000600387 NDUFC1O43677 76 aa12.56□□□□□ -0.4
ARHGEF1-221ENST00000600387 RMI2Q96E14 147 aa12.55□□□□□ -0.4
ARHGEF1-221ENST00000600387 SNURFQ9Y675 71 aa12.55□□□□□ -0.4
ARHGEF1-221ENST00000600387 WFDC11Q8NEX6 87 aa12.55□□□□□ -0.4
ARHGEF1-221ENST00000600387 F8WEM9 126 aa12.54□□□□□ -0.4
ARHGEF1-221ENST00000600387 ZNF73O43830 326 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF1-221ENST00000600387 PRB1P04280 392 aa12.54□□□□□ -0.4
ARHGEF1-221ENST00000600387 COX7BP24311 80 aa12.54□□□□□ -0.4
ARHGEF1-221ENST00000600387 CACNA1AO00555 2505 aa12.53□□□□□ -0.4
ARHGEF1-221ENST00000600387 TRBV7-6A0A0J9YX20 115 aa12.53□□□□□ -0.4
ARHGEF1-221ENST00000600387 ITPR3Q14573 2671 aa12.53□□□□□ -0.4
ARHGEF1-221ENST00000600387 ELOF1P60002 83 aaKnown RBP12.52□□□□□ -0.41
ARHGEF1-221ENST00000600387 DAD1P61803 113 aa12.52□□□□□ -0.41
ARHGEF1-221ENST00000600387 LELP1Q5T871 98 aa12.52□□□□□ -0.41
ARHGEF1-221ENST00000600387 PRR34Q9NV39 138 aa12.52□□□□□ -0.41
ARHGEF1-221ENST00000600387 PIEZO1Q92508 2521 aa12.52□□□□□ -0.41
ARHGEF1-221ENST00000600387 MRAPQ8TCY5 172 aa12.51□□□□□ -0.41
ARHGEF1-221ENST00000600387 SETD2Q9BYW2 2564 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF1-221ENST00000600387 ATP5EP56381 51 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF1-221ENST00000600387 TM2D3Q9BRN9 247 aa12.5□□□□□ -0.41
ARHGEF1-221ENST00000600387 C6orf48Q9UBA6 75 aa12.5□□□□□ -0.41
ARHGEF1-221ENST00000600387 SMIM26A0A096LP01 95 aa12.49□□□□□ -0.41
ARHGEF1-221ENST00000600387 SCXQ7RTU7 201 aa12.49□□□□□ -0.41
ARHGEF1-221ENST00000600387 DEFB4AO15263 64 aa12.48□□□□□ -0.41
ARHGEF1-221ENST00000600387 XAGE1AQ9HD64 81 aa12.48□□□□□ -0.41
ARHGEF1-221ENST00000600387 KLK12Q9UKR0 248 aa12.48□□□□□ -0.41
ARHGEF1-221ENST00000600387 NREPQ16612 68 aa12.47□□□□□ -0.41
ARHGEF1-221ENST00000600387 ERC2-IT1O76042 136 aa12.46□□□□□ -0.41
ARHGEF1-221ENST00000600387 MIFP14174 115 aa12.46□□□□□ -0.41
ARHGEF1-221ENST00000600387 UBR5O95071 2799 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF1-221ENST00000600387 DEFB135Q30KP9 77 aa12.46□□□□□ -0.42
ARHGEF1-221ENST00000600387 ZNF462Q96JM2 2506 aa12.45□□□□□ -0.42
ARHGEF1-221ENST00000600387 GCN1Q92616 2671 aaKnown RBP12.45□□□□□ -0.42
ARHGEF1-221ENST00000600387 BPY2O14599 106 aa12.45□□□□□ -0.42
ARHGEF1-221ENST00000600387 APCP25054 2843 aa12.45□□□□□ -0.42
ARHGEF1-221ENST00000600387 ZFYVE26Q68DK2 2539 aa12.45□□□□□ -0.42
ARHGEF1-221ENST00000600387 VPREB1P12018 145 aa12.43□□□□□ -0.42
ARHGEF1-221ENST00000600387 KRTAP1-1Q07627 177 aa12.43□□□□□ -0.42
ARHGEF1-221ENST00000600387 M0R378 163 aa12.42□□□□□ -0.42
ARHGEF1-221ENST00000600387 APOC4P55056 127 aa12.42□□□□□ -0.42
ARHGEF1-221ENST00000600387 TMEM254Q8TBM7 123 aa12.42□□□□□ -0.42
ARHGEF1-221ENST00000600387 PRO0628Q9UI54 55 aa12.42□□□□□ -0.42
ARHGEF1-221ENST00000600387 FLNAP21333 2647 aaKnown RBP12.42□□□□□ -0.42
ARHGEF1-221ENST00000600387 FP248Q71RG6 208 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF1-221ENST00000600387 CELA1Q9UNI1 258 aa12.41□□□□□ -0.42
ARHGEF1-221ENST00000600387 LINC00528Q8N1L1 170 aa12.4□□□□□ -0.42
ARHGEF1-221ENST00000600387 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.42
ARHGEF1-221ENST00000600387 CCDC168Q8NDH2 2452 aa12.39□□□□□ -0.43
ARHGEF1-221ENST00000600387 NBEAL2Q6ZNJ1 2754 aa12.39□□□□□ -0.43
ARHGEF1-221ENST00000600387 SPART-AS1P0CW21 52 aa12.39□□□□□ -0.43
ARHGEF1-221ENST00000600387 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
ARHGEF1-221ENST00000600387 Q8NAQ8 132 aa12.39□□□□□ -0.43
ARHGEF1-221ENST00000600387 CAMK2N2Q96S95 79 aa12.39□□□□□ -0.43
ARHGEF1-221ENST00000600387 HTN3P15516 51 aa12.38□□□□□ -0.43
ARHGEF1-221ENST00000600387 EGFEM1PQ0D2K5 195 aa12.38□□□□□ -0.43
ARHGEF1-221ENST00000600387 IGKV4-1P06312 121 aa12.37□□□□□ -0.43
ARHGEF1-221ENST00000600387 HIGD2BQ4VC39 106 aa12.34□□□□□ -0.43
ARHGEF1-221ENST00000600387 OCR1Q9BZK8 76 aa12.34□□□□□ -0.43
ARHGEF1-221ENST00000600387 Q8N9L7 120 aa12.32□□□□□ -0.44
ARHGEF1-221ENST00000600387 A0A0U1RQV1 116 aa12.32□□□□□ -0.44
ARHGEF1-221ENST00000600387 PRYO14603 147 aa12.32□□□□□ -0.44
ARHGEF1-221ENST00000600387 Q6ZRU5 148 aa12.31□□□□□ -0.44
ARHGEF1-221ENST00000600387 LINC00474Q9P2X8 69 aa12.31□□□□□ -0.44
ARHGEF1-221ENST00000600387 ANK3Q12955 4377 aaKnown RBP12.29□□□□□ -0.44
ARHGEF1-221ENST00000600387 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
ARHGEF1-221ENST00000600387 MTORP42345 2549 aa12.28□□□□□ -0.44
ARHGEF1-221ENST00000600387 C3orf84H3BNL1 204 aa12.26□□□□□ -0.45
ARHGEF1-221ENST00000600387 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
ARHGEF1-221ENST00000600387 A0A1B0GW54 56 aa12.25□□□□□ -0.45
ARHGEF1-221ENST00000600387 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
ARHGEF1-221ENST00000600387 ACANP16112 2415 aa12.25□□□□□ -0.45
ARHGEF1-221ENST00000600387 IGLV5-48A0A075B6I7 105 aa12.25□□□□□ -0.45
ARHGEF1-221ENST00000600387 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
ARHGEF1-221ENST00000600387 F8WDY8 70 aa12.24□□□□□ -0.45
ARHGEF1-221ENST00000600387 WFDC10BQ8IUB3 73 aa12.24□□□□□ -0.45
ARHGEF1-221ENST00000600387 KCNQ1DNQ9H478 68 aa12.24□□□□□ -0.45
ARHGEF1-221ENST00000600387 Q6ZRP5 223 aa12.23□□□□□ -0.45
ARHGEF1-221ENST00000600387 Q8N377 158 aa12.22□□□□□ -0.45
ARHGEF1-221ENST00000600387 HIVEP2P31629 2446 aa12.22□□□□□ -0.45
ARHGEF1-221ENST00000600387 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms