RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 A0A1B0GUV1 79 aa13.21□□□□□ -0.29
ARHGEF1-218ENST00000599589 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
ARHGEF1-218ENST00000599589 COX17Q14061 63 aa13.21□□□□□ -0.29
ARHGEF1-218ENST00000599589 ZNF561-AS1K7EIQ3 104 aa13.21□□□□□ -0.3
ARHGEF1-218ENST00000599589 LOC110117498A0A087WWA1 95 aa13.2□□□□□ -0.3
ARHGEF1-218ENST00000599589 LINC00269Q8N2A0 174 aa13.2□□□□□ -0.3
ARHGEF1-218ENST00000599589 LINC00482Q8N8I6 264 aa13.2□□□□□ -0.3
ARHGEF1-218ENST00000599589 FASNP49327 2511 aaKnown RBP13.2□□□□□ -0.3
ARHGEF1-218ENST00000599589 Q6ZVQ6 151 aa13.19□□□□□ -0.3
ARHGEF1-218ENST00000599589 SNURFQ9Y675 71 aa13.19□□□□□ -0.3
ARHGEF1-218ENST00000599589 SERP1Q9Y6X1 66 aa13.19□□□□□ -0.3
ARHGEF1-218ENST00000599589 HIVEP2P31629 2446 aa13.18□□□□□ -0.3
ARHGEF1-218ENST00000599589 IGLV10-54A0A075B6I4 117 aa13.18□□□□□ -0.3
ARHGEF1-218ENST00000599589 EPM2AB3EWF7 344 aa13.18□□□□□ -0.3
ARHGEF1-218ENST00000599589 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
ARHGEF1-218ENST00000599589 C19orf73Q9NVV2 129 aa13.18□□□□□ -0.3
ARHGEF1-218ENST00000599589 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
ARHGEF1-218ENST00000599589 BCE1O60756 84 aa13.17□□□□□ -0.3
ARHGEF1-218ENST00000599589 SETD2Q9BYW2 2564 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF1-218ENST00000599589 RMI2Q96E14 147 aa13.17□□□□□ -0.3
ARHGEF1-218ENST00000599589 KLKP1Q107X0 134 aa13.16□□□□□ -0.3
ARHGEF1-218ENST00000599589 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
ARHGEF1-218ENST00000599589 CHCHD10Q8WYQ3 142 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF1-218ENST00000599589 IGHV4-28A0A0C4DH34 117 aa13.15□□□□□ -0.3
ARHGEF1-218ENST00000599589 Q8N3U1 123 aa13.14□□□□□ -0.31
ARHGEF1-218ENST00000599589 Q6ZQY7 126 aa13.13□□□□□ -0.31
ARHGEF1-218ENST00000599589 KRTAP10-3P60369 221 aa13.13□□□□□ -0.31
ARHGEF1-218ENST00000599589 GCN1Q92616 2671 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-218ENST00000599589 F8WEM9 126 aa13.12□□□□□ -0.31
ARHGEF1-218ENST00000599589 C10orf25Q5T742 122 aa13.1□□□□□ -0.31
ARHGEF1-218ENST00000599589 FN1P02751 2386 aaKnown RBP13.1□□□□□ -0.31
ARHGEF1-218ENST00000599589 SCXQ7RTU7 201 aa13.1□□□□□ -0.31
ARHGEF1-218ENST00000599589 HECTD1Q9ULT8 2610 aa13.1□□□□□ -0.31
ARHGEF1-218ENST00000599589 ANGP03950 147 aaKnown RBP13.09□□□□□ -0.31
ARHGEF1-218ENST00000599589 CXCL6P80162 114 aa13.09□□□□□ -0.31
ARHGEF1-218ENST00000599589 UNQ6190/PRO20217Q6UXQ8 127 aa13.09□□□□□ -0.31
ARHGEF1-218ENST00000599589 LINC00336Q6ZUF6 198 aa13.09□□□□□ -0.31
ARHGEF1-218ENST00000599589 REG3AQ06141 175 aa13.09□□□□□ -0.31
ARHGEF1-218ENST00000599589 MRAPQ8TCY5 172 aa13.09□□□□□ -0.31
ARHGEF1-218ENST00000599589 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
ARHGEF1-218ENST00000599589 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
ARHGEF1-218ENST00000599589 C9orf66Q5T8R8 295 aa13.08□□□□□ -0.32
ARHGEF1-218ENST00000599589 MUC7Q8TAX7 377 aa13.08□□□□□ -0.32
ARHGEF1-218ENST00000599589 IGLV6-57P01721 117 aa13.07□□□□□ -0.32
ARHGEF1-218ENST00000599589 LINC00612Q8N6U2 182 aa13.07□□□□□ -0.32
ARHGEF1-218ENST00000599589 PRO0255Q9UI72 69 aa13.07□□□□□ -0.32
ARHGEF1-218ENST00000599589 PDE6GP18545 87 aa13.05□□□□□ -0.32
ARHGEF1-218ENST00000599589 FP248Q71RG6 208 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF1-218ENST00000599589 NOTCH2Q04721 2471 aa13.04□□□□□ -0.32
ARHGEF1-218ENST00000599589 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
ARHGEF1-218ENST00000599589 SMIM26A0A096LP01 95 aa13.02□□□□□ -0.32
ARHGEF1-218ENST00000599589 PRO0628Q9UI54 55 aa13.02□□□□□ -0.32
ARHGEF1-218ENST00000599589 NBEAL2Q6ZNJ1 2754 aa13.02□□□□□ -0.33
ARHGEF1-218ENST00000599589 TRBV7-4A0A0J9YYF1 115 aa13.01□□□□□ -0.33
ARHGEF1-218ENST00000599589 CYSRT1A8MQ03 144 aa13.01□□□□□ -0.33
ARHGEF1-218ENST00000599589 OTOGQ6ZRI0 2925 aa13□□□□□ -0.33
ARHGEF1-218ENST00000599589 LINC00474Q9P2X8 69 aa13□□□□□ -0.33
ARHGEF1-218ENST00000599589 TRBV7-6A0A0J9YX20 115 aa12.99□□□□□ -0.33
ARHGEF1-218ENST00000599589 DIRC1Q969H9 104 aa12.99□□□□□ -0.33
ARHGEF1-218ENST00000599589 H3BQ85 93 aa12.99□□□□□ -0.33
ARHGEF1-218ENST00000599589 X6R8D5 127 aa12.99□□□□□ -0.33
ARHGEF1-218ENST00000599589 MIFP14174 115 aa12.98□□□□□ -0.33
ARHGEF1-218ENST00000599589 NREPQ16612 68 aa12.98□□□□□ -0.33
ARHGEF1-218ENST00000599589 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
ARHGEF1-218ENST00000599589 NDUFC1O43677 76 aa12.97□□□□□ -0.33
ARHGEF1-218ENST00000599589 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
ARHGEF1-218ENST00000599589 XAGE1AQ9HD64 81 aa12.97□□□□□ -0.33
ARHGEF1-218ENST00000599589 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF1-218ENST00000599589 BPY2O14599 106 aa12.95□□□□□ -0.34
ARHGEF1-218ENST00000599589 DEFB4AO15263 64 aa12.95□□□□□ -0.34
ARHGEF1-218ENST00000599589 ZNF73O43830 326 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF1-218ENST00000599589 COX7BP24311 80 aa12.94□□□□□ -0.34
ARHGEF1-218ENST00000599589 TMEM254Q8TBM7 123 aa12.94□□□□□ -0.34
ARHGEF1-218ENST00000599589 Q8N9L7 120 aa12.93□□□□□ -0.34
ARHGEF1-218ENST00000599589 C1orf43Q9BWL3 253 aa12.91□□□□□ -0.34
ARHGEF1-218ENST00000599589 C6orf48Q9UBA6 75 aa12.91□□□□□ -0.34
ARHGEF1-218ENST00000599589 ATP5EP56381 51 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-218ENST00000599589 ELOF1P60002 83 aaKnown RBP12.91□□□□□ -0.34
ARHGEF1-218ENST00000599589 NSD1Q96L73 2696 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-218ENST00000599589 KLK12Q9UKR0 248 aa12.89□□□□□ -0.35
ARHGEF1-218ENST00000599589 LYRM9A8MSI8 78 aa12.87□□□□□ -0.35
ARHGEF1-218ENST00000599589 FAM229BQ4G0N7 80 aa12.87□□□□□ -0.35
ARHGEF1-218ENST00000599589 GVQW2A0A096LPI5 108 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-218ENST00000599589 IGKV4-1P06312 121 aa12.86□□□□□ -0.35
ARHGEF1-218ENST00000599589 PKIGQ9Y2B9 76 aa12.86□□□□□ -0.35
ARHGEF1-218ENST00000599589 HIVEP1P15822 2718 aa12.85□□□□□ -0.35
ARHGEF1-218ENST00000599589 ERC2-IT1O76042 136 aa12.85□□□□□ -0.35
ARHGEF1-218ENST00000599589 DAD1P61803 113 aa12.83□□□□□ -0.36
ARHGEF1-218ENST00000599589 DEFB135Q30KP9 77 aa12.83□□□□□ -0.36
ARHGEF1-218ENST00000599589 PRR34Q9NV39 138 aa12.83□□□□□ -0.36
ARHGEF1-218ENST00000599589 MPLKIPQ8TAP9 179 aa12.82□□□□□ -0.36
ARHGEF1-218ENST00000599589 BRK1Q8WUW1 75 aa12.82□□□□□ -0.36
ARHGEF1-218ENST00000599589 PRYO14603 147 aa12.82□□□□□ -0.36
ARHGEF1-218ENST00000599589 VPREB1P12018 145 aa12.82□□□□□ -0.36
ARHGEF1-218ENST00000599589 OCR1Q9BZK8 76 aa12.82□□□□□ -0.36
ARHGEF1-218ENST00000599589 A0A0U1RQV1 116 aa12.81□□□□□ -0.36
ARHGEF1-218ENST00000599589 HTN3P15516 51 aa12.81□□□□□ -0.36
ARHGEF1-218ENST00000599589 APOC4P55056 127 aa12.81□□□□□ -0.36
ARHGEF1-218ENST00000599589 LELP1Q5T871 98 aa12.81□□□□□ -0.36
ARHGEF1-218ENST00000599589 CELA1Q9UNI1 258 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms