RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 Q8NDZ9 215 aa6.04□□□□□ -1.44
CHMP2A-202ENST00000596708 LINC00158P58513 81 aa6.03□□□□□ -1.44
CHMP2A-202ENST00000596708 TMEM170BQ5T4T1 132 aa6.03□□□□□ -1.44
CHMP2A-202ENST00000596708 SPRR4Q96PI1 79 aa6.03□□□□□ -1.44
CHMP2A-202ENST00000596708 A0A0U1RRA0 63 aa6.02□□□□□ -1.45
CHMP2A-202ENST00000596708 TMEM218A2RU14 115 aa6.02□□□□□ -1.45
CHMP2A-202ENST00000596708 CLLU1Q5K131 121 aa6.02□□□□□ -1.45
CHMP2A-202ENST00000596708 SFTA2Q6UW10 78 aa6.02□□□□□ -1.45
CHMP2A-202ENST00000596708 BAGE3Q86Y29 109 aa6.02□□□□□ -1.45
CHMP2A-202ENST00000596708 ZNF706Q9Y5V0 76 aaPredicted RBP6.02□□□□□ -1.45
CHMP2A-202ENST00000596708 A0A096LNJ9 63 aa6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 C11orf86A6NJI1 115 aa6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 ATP6V1G1O75348 118 aa6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 HBDP02042 147 aa6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 LINC00614P0C842 121 aa6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 UQCC3Q6UW78 93 aa6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 DAND5Q8N907 189 aa6.01□□□□□ -1.45
CHMP2A-202ENST00000596708 PMCHL1Q16048 86 aa6□□□□□ -1.45
CHMP2A-202ENST00000596708 Q8NBF4 154 aa6□□□□□ -1.45
CHMP2A-202ENST00000596708 SEC11CQ9BY50 192 aa6□□□□□ -1.45
CHMP2A-202ENST00000596708 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
CHMP2A-202ENST00000596708 URB1-AS1Q96HZ7 61 aa5.99□□□□□ -1.45
CHMP2A-202ENST00000596708 TRAPPC1Q9Y5R8 145 aa5.99□□□□□ -1.45
CHMP2A-202ENST00000596708 PRYO14603 147 aa5.98□□□□□ -1.45
CHMP2A-202ENST00000596708 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
CHMP2A-202ENST00000596708 MEIG1Q5JSS6 88 aa5.98□□□□□ -1.45
CHMP2A-202ENST00000596708 C18orf32Q8TCD1 76 aa5.98□□□□□ -1.45
CHMP2A-202ENST00000596708 RPS10P5Q9NQ39 176 aa5.98□□□□□ -1.45
CHMP2A-202ENST00000596708 CHTOPQ9Y3Y2 248 aaKnown RBP5.98□□□□□ -1.45
CHMP2A-202ENST00000596708 ETDCA0A1B0GVM5 59 aa5.97□□□□□ -1.45
CHMP2A-202ENST00000596708 NCR3O14931 201 aa5.97□□□□□ -1.45
CHMP2A-202ENST00000596708 SMIM13P0DJ93 91 aa5.97□□□□□ -1.45
CHMP2A-202ENST00000596708 LINC01547P58512 204 aaPredicted RBP5.97□□□□□ -1.45
CHMP2A-202ENST00000596708 BOD1L2Q8IYS8 172 aa5.97□□□□□ -1.45
CHMP2A-202ENST00000596708 TMEM223A0PJW6 202 aa5.96□□□□□ -1.46
CHMP2A-202ENST00000596708 SPINK1P00995 79 aa5.96□□□□□ -1.46
CHMP2A-202ENST00000596708 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
CHMP2A-202ENST00000596708 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
CHMP2A-202ENST00000596708 GAGE2AQ6NT46 116 aa5.95□□□□□ -1.46
CHMP2A-202ENST00000596708 KCNQ1DNQ9H478 68 aa5.95□□□□□ -1.46
CHMP2A-202ENST00000596708 NDUFA12Q9UI09 145 aa5.95□□□□□ -1.46
CHMP2A-202ENST00000596708 SPRR1AP35321 89 aa5.94□□□□□ -1.46
CHMP2A-202ENST00000596708 S100A12P80511 92 aa5.94□□□□□ -1.46
CHMP2A-202ENST00000596708 RHEBQ15382 184 aa5.94□□□□□ -1.46
CHMP2A-202ENST00000596708 MIR7-3HGQ8N6C7 128 aa5.94□□□□□ -1.46
CHMP2A-202ENST00000596708 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
CHMP2A-202ENST00000596708 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
CHMP2A-202ENST00000596708 COMMD7Q86VX2 200 aa5.93□□□□□ -1.46
CHMP2A-202ENST00000596708 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 LINC00587B1AMM8 73 aa5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 HERV-K104P63124 156 aa5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 MOBPQ13875 183 aa5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 SSBP3-AS1Q7Z2R9 100 aa5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 IFI27L1Q96BM0 104 aa5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 KRTAP4-1Q9BYQ7 146 aa5.92□□□□□ -1.46
CHMP2A-202ENST00000596708 IFITM2Q01629 132 aa5.91□□□□□ -1.46
CHMP2A-202ENST00000596708 LINC00483Q53H64 154 aa5.91□□□□□ -1.46
CHMP2A-202ENST00000596708 C10orf91Q5T1B1 145 aa5.91□□□□□ -1.46
CHMP2A-202ENST00000596708 FAM19A2Q8N3H0 131 aa5.91□□□□□ -1.46
CHMP2A-202ENST00000596708 MAP1LC3CQ9BXW4 147 aa5.91□□□□□ -1.46
CHMP2A-202ENST00000596708 MYMXA0A1B0GTQ4 84 aa5.9□□□□□ -1.46
CHMP2A-202ENST00000596708 B5MCH6 92 aa5.9□□□□□ -1.46
CHMP2A-202ENST00000596708 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
CHMP2A-202ENST00000596708 SLC25A20O43772 301 aa5.89□□□□□ -1.47
CHMP2A-202ENST00000596708 DDTP30046 118 aa5.89□□□□□ -1.47
CHMP2A-202ENST00000596708 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
CHMP2A-202ENST00000596708 Q8N377 158 aa5.89□□□□□ -1.47
CHMP2A-202ENST00000596708 H0Y8G0 127 aa5.88□□□□□ -1.47
CHMP2A-202ENST00000596708 CHCHD1Q96BP2 118 aaKnown RBP5.88□□□□□ -1.47
CHMP2A-202ENST00000596708 C9orf153Q5TBE3 101 aa5.87□□□□□ -1.47
CHMP2A-202ENST00000596708 Q9BRP9 147 aa5.87□□□□□ -1.47
CHMP2A-202ENST00000596708 APOC3P02656 99 aa5.86□□□□□ -1.47
CHMP2A-202ENST00000596708 S100A7L2Q5SY68 101 aa5.86□□□□□ -1.47
CHMP2A-202ENST00000596708 Q6ZRX8 168 aa5.86□□□□□ -1.47
CHMP2A-202ENST00000596708 KRTAP3-3Q9BYR6 98 aa5.86□□□□□ -1.47
CHMP2A-202ENST00000596708 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
CHMP2A-202ENST00000596708 LOC107984156A0A0G2JMH3 177 aa5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 LEPROTO15243 131 aa5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 HSBP1O75506 76 aa5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 JOSD1Q15040 202 aaPredicted RBP5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 XP32Q5T750 250 aa5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 ARL17AQ8IVW1 177 aa5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 MIEN1Q9BRT3 115 aa5.85□□□□□ -1.47
CHMP2A-202ENST00000596708 SNAPINO95295 136 aa5.84□□□□□ -1.47
CHMP2A-202ENST00000596708 SPANXB1Q9NS25 103 aaPredicted RBP5.84□□□□□ -1.47
CHMP2A-202ENST00000596708 TSPEAR-AS2P59090 65 aa5.83□□□□□ -1.48
CHMP2A-202ENST00000596708 TRAV23DV6A0A075B6W5 121 aa5.82□□□□□ -1.48
CHMP2A-202ENST00000596708 J3QQQ9 107 aa5.82□□□□□ -1.48
CHMP2A-202ENST00000596708 NPC2P61916 151 aa5.82□□□□□ -1.48
CHMP2A-202ENST00000596708 NDUFA5Q16718 116 aa5.82□□□□□ -1.48
CHMP2A-202ENST00000596708 SVBPQ8N300 66 aa5.82□□□□□ -1.48
CHMP2A-202ENST00000596708 LEPROTL1O95214 131 aa5.81□□□□□ -1.48
CHMP2A-202ENST00000596708 NDUFC2O95298 119 aa5.81□□□□□ -1.48
CHMP2A-202ENST00000596708 IGLV6-57P01721 117 aa5.81□□□□□ -1.48
CHMP2A-202ENST00000596708 LGALS3P17931 250 aaKnown RBP5.81□□□□□ -1.48
CHMP2A-202ENST00000596708 HINT1P49773 126 aaPredicted RBP5.81□□□□□ -1.48
CHMP2A-202ENST00000596708 HERVK_113P61574 105 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms