RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 CBLN2Q8IUK8 224 aa6.02□□□□□ -1.45
PNKP-208ENST00000596624 SPRR4Q96PI1 79 aa6.02□□□□□ -1.45
PNKP-208ENST00000596624 SEC11CQ9BY50 192 aa6.02□□□□□ -1.45
PNKP-208ENST00000596624 SPRR1AP35321 89 aa6.01□□□□□ -1.45
PNKP-208ENST00000596624 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
PNKP-208ENST00000596624 C11orf86A6NJI1 115 aa6□□□□□ -1.45
PNKP-208ENST00000596624 KRTAP4-16G5E9R7 235 aaPredicted RBP6□□□□□ -1.45
PNKP-208ENST00000596624 S100PP25815 95 aa6□□□□□ -1.45
PNKP-208ENST00000596624 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
PNKP-208ENST00000596624 C10orf91Q5T1B1 145 aa6□□□□□ -1.45
PNKP-208ENST00000596624 SMCO4Q9NRQ5 59 aa6□□□□□ -1.45
PNKP-208ENST00000596624 LINC00614P0C842 121 aa5.99□□□□□ -1.45
PNKP-208ENST00000596624 S100A1P23297 94 aa5.99□□□□□ -1.45
PNKP-208ENST00000596624 FABP9Q0Z7S8 132 aa5.99□□□□□ -1.45
PNKP-208ENST00000596624 LINC00337Q8N6G1 96 aa5.99□□□□□ -1.45
PNKP-208ENST00000596624 C18orf32Q8TCD1 76 aa5.99□□□□□ -1.45
PNKP-208ENST00000596624 HBDP02042 147 aa5.98□□□□□ -1.45
PNKP-208ENST00000596624 KCNQ1DNQ9H478 68 aa5.98□□□□□ -1.45
PNKP-208ENST00000596624 SPINK1P00995 79 aa5.97□□□□□ -1.45
PNKP-208ENST00000596624 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
PNKP-208ENST00000596624 LINC00483Q53H64 154 aa5.97□□□□□ -1.45
PNKP-208ENST00000596624 HIGD2AQ9BW72 106 aa5.97□□□□□ -1.45
PNKP-208ENST00000596624 ZNF706Q9Y5V0 76 aaPredicted RBP5.97□□□□□ -1.45
PNKP-208ENST00000596624 PRYO14603 147 aa5.96□□□□□ -1.46
PNKP-208ENST00000596624 IFITM2Q01629 132 aa5.96□□□□□ -1.46
PNKP-208ENST00000596624 BAGE3Q86Y29 109 aa5.96□□□□□ -1.46
PNKP-208ENST00000596624 LOC107984156A0A0G2JMH3 177 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 TMEM223A0PJW6 202 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 NDUFA6P56556 154 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 RHEBQ15382 184 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 TMEM170BQ5T4T1 132 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 LCE2DQ5TA82 110 aaPredicted RBP5.95□□□□□ -1.46
PNKP-208ENST00000596624 ARL17AQ8IVW1 177 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 Q8NBF4 154 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
PNKP-208ENST00000596624 TRAV12-1A0A0B4J245 112 aa5.94□□□□□ -1.46
PNKP-208ENST00000596624 LINC00158P58513 81 aa5.94□□□□□ -1.46
PNKP-208ENST00000596624 C4orf48Q5BLP8 95 aa5.94□□□□□ -1.46
PNKP-208ENST00000596624 SMCR5Q8TEV8 140 aa5.94□□□□□ -1.46
PNKP-208ENST00000596624 ATP6V1G1O75348 118 aa5.93□□□□□ -1.46
PNKP-208ENST00000596624 PMCHL1Q16048 86 aa5.93□□□□□ -1.46
PNKP-208ENST00000596624 CHTOPQ9Y3Y2 248 aaKnown RBP5.93□□□□□ -1.46
PNKP-208ENST00000596624 HERV-K104P63124 156 aa5.92□□□□□ -1.46
PNKP-208ENST00000596624 SSBP3-AS1Q7Z2R9 100 aa5.92□□□□□ -1.46
PNKP-208ENST00000596624 DAND5Q8N907 189 aa5.92□□□□□ -1.46
PNKP-208ENST00000596624 TRAPPC1Q9Y5R8 145 aa5.92□□□□□ -1.46
PNKP-208ENST00000596624 SMIM13P0DJ93 91 aa5.91□□□□□ -1.46
PNKP-208ENST00000596624 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
PNKP-208ENST00000596624 BOD1L2Q8IYS8 172 aa5.91□□□□□ -1.46
PNKP-208ENST00000596624 Q8N377 158 aa5.91□□□□□ -1.46
PNKP-208ENST00000596624 MIR7-3HGQ8N6C7 128 aa5.91□□□□□ -1.46
PNKP-208ENST00000596624 TRBV10-3A0A0K0K1G6 114 aa5.9□□□□□ -1.46
PNKP-208ENST00000596624 LINC00587B1AMM8 73 aa5.9□□□□□ -1.46
PNKP-208ENST00000596624 B5MCH6 92 aa5.9□□□□□ -1.46
PNKP-208ENST00000596624 XP32Q5T750 250 aa5.9□□□□□ -1.46
PNKP-208ENST00000596624 RPS10P5Q9NQ39 176 aa5.9□□□□□ -1.46
PNKP-208ENST00000596624 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
PNKP-208ENST00000596624 A0A0U1RRA0 63 aa5.89□□□□□ -1.47
PNKP-208ENST00000596624 LINC01547P58512 204 aaPredicted RBP5.89□□□□□ -1.47
PNKP-208ENST00000596624 IFI27L1Q96BM0 104 aa5.89□□□□□ -1.47
PNKP-208ENST00000596624 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
PNKP-208ENST00000596624 ETDCA0A1B0GVM5 59 aa5.88□□□□□ -1.47
PNKP-208ENST00000596624 ERC2-IT1O76042 136 aa5.88□□□□□ -1.47
PNKP-208ENST00000596624 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
PNKP-208ENST00000596624 FAM19A2Q8N3H0 131 aa5.88□□□□□ -1.47
PNKP-208ENST00000596624 YPEL4Q96NS1 127 aa5.88□□□□□ -1.47
PNKP-208ENST00000596624 Q9BRP9 147 aa5.88□□□□□ -1.47
PNKP-208ENST00000596624 NCR3O14931 201 aa5.87□□□□□ -1.47
PNKP-208ENST00000596624 SLC25A20O43772 301 aa5.87□□□□□ -1.47
PNKP-208ENST00000596624 COMMD7Q86VX2 200 aa5.87□□□□□ -1.47
PNKP-208ENST00000596624 NDUFA12Q9UI09 145 aa5.87□□□□□ -1.47
PNKP-208ENST00000596624 MYMXA0A1B0GTQ4 84 aa5.86□□□□□ -1.47
PNKP-208ENST00000596624 KRTAP19-2Q3LHN2 52 aa5.86□□□□□ -1.47
PNKP-208ENST00000596624 MEIG1Q5JSS6 88 aa5.86□□□□□ -1.47
PNKP-208ENST00000596624 GAGE2AQ6NT46 116 aa5.86□□□□□ -1.47
PNKP-208ENST00000596624 Q6ZRX8 168 aa5.86□□□□□ -1.47
PNKP-208ENST00000596624 MAP1LC3CQ9BXW4 147 aa5.86□□□□□ -1.47
PNKP-208ENST00000596624 C5orf52A6NGY3 159 aa5.85□□□□□ -1.47
PNKP-208ENST00000596624 IGLV6-57P01721 117 aa5.85□□□□□ -1.47
PNKP-208ENST00000596624 MOBPQ13875 183 aa5.85□□□□□ -1.47
PNKP-208ENST00000596624 NDUFC2O95298 119 aa5.84□□□□□ -1.47
PNKP-208ENST00000596624 TSPEAR-AS2P59090 65 aa5.84□□□□□ -1.47
PNKP-208ENST00000596624 S100A12P80511 92 aa5.84□□□□□ -1.47
PNKP-208ENST00000596624 DDTP30046 118 aa5.83□□□□□ -1.48
PNKP-208ENST00000596624 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
PNKP-208ENST00000596624 IGLV9-49A0A0B4J1Y8 123 aa5.82□□□□□ -1.48
PNKP-208ENST00000596624 LEPROTO15243 131 aa5.82□□□□□ -1.48
PNKP-208ENST00000596624 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
PNKP-208ENST00000596624 SNAPINO95295 136 aa5.81□□□□□ -1.48
PNKP-208ENST00000596624 SPRR1BP22528 89 aa5.81□□□□□ -1.48
PNKP-208ENST00000596624 FSIP2Q5CZC0 6907 aa5.81□□□□□ -1.48
PNKP-208ENST00000596624 NMUP48645 174 aa5.8□□□□□ -1.48
PNKP-208ENST00000596624 JOSD1Q15040 202 aaPredicted RBP5.8□□□□□ -1.48
PNKP-208ENST00000596624 SVBPQ8N300 66 aa5.8□□□□□ -1.48
PNKP-208ENST00000596624 J3QQQ9 107 aa5.79□□□□□ -1.48
PNKP-208ENST00000596624 HSBP1O75506 76 aa5.79□□□□□ -1.48
PNKP-208ENST00000596624 APOC3P02656 99 aa5.79□□□□□ -1.48
PNKP-208ENST00000596624 PLNP26678 52 aa5.79□□□□□ -1.48
PNKP-208ENST00000596624 LINC00310P59036 64 aa5.79□□□□□ -1.48
PNKP-208ENST00000596624 SLC7A5P1Q8MH63 180 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms