RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 PRR4Q16378 134 aa10.55□□□□□ -0.72
PNKP-206ENST00000595792 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
PNKP-206ENST00000595792 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
PNKP-206ENST00000595792 A0A087X002 238 aa10.54□□□□□ -0.72
PNKP-206ENST00000595792 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
PNKP-206ENST00000595792 RPL28P46779 137 aaKnown RBP10.54□□□□□ -0.72
PNKP-206ENST00000595792 SERF1AO75920 110 aa10.52□□□□□ -0.73
PNKP-206ENST00000595792 TSPAN13O95857 204 aa10.52□□□□□ -0.73
PNKP-206ENST00000595792 ANAPC11Q9NYG5 84 aa10.52□□□□□ -0.73
PNKP-206ENST00000595792 A0A0U1RRA0 63 aa10.51□□□□□ -0.73
PNKP-206ENST00000595792 TMEM238C9JI98 176 aa10.51□□□□□ -0.73
PNKP-206ENST00000595792 LINC00587B1AMM8 73 aa10.5□□□□□ -0.73
PNKP-206ENST00000595792 LINC00158P58513 81 aa10.49□□□□□ -0.73
PNKP-206ENST00000595792 H0Y8G0 127 aa10.48□□□□□ -0.73
PNKP-206ENST00000595792 M0R378 163 aa10.48□□□□□ -0.73
PNKP-206ENST00000595792 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
PNKP-206ENST00000595792 PLNP26678 52 aa10.48□□□□□ -0.73
PNKP-206ENST00000595792 UBE2AP49459 152 aa10.48□□□□□ -0.73
PNKP-206ENST00000595792 PRLHP81277 87 aa10.48□□□□□ -0.73
PNKP-206ENST00000595792 TMEM126AQ9H061 195 aa10.48□□□□□ -0.73
PNKP-206ENST00000595792 TSPEAR-AS2P59090 65 aa10.47□□□□□ -0.73
PNKP-206ENST00000595792 RPL24P83731 157 aaKnown RBP10.47□□□□□ -0.73
PNKP-206ENST00000595792 KRTAP13-2Q52LG2 175 aa10.47□□□□□ -0.73
PNKP-206ENST00000595792 HERV-K104P63124 156 aa10.46□□□□□ -0.73
PNKP-206ENST00000595792 TYMSOSQ8TAI1 123 aa10.46□□□□□ -0.73
PNKP-206ENST00000595792 MAP1LC3CQ9BXW4 147 aa10.46□□□□□ -0.73
PNKP-206ENST00000595792 CRYGAP11844 174 aa10.45□□□□□ -0.74
PNKP-206ENST00000595792 HERVK_113P61574 105 aa10.45□□□□□ -0.74
PNKP-206ENST00000595792 FABP4P15090 132 aa10.44□□□□□ -0.74
PNKP-206ENST00000595792 FAM19A1Q7Z5A9 133 aa10.44□□□□□ -0.74
PNKP-206ENST00000595792 NDUFA12Q9UI09 145 aa10.44□□□□□ -0.74
PNKP-206ENST00000595792 MUC2Q02817 5179 aa10.44□□□□□ -0.74
PNKP-206ENST00000595792 DPM2O94777 84 aa10.43□□□□□ -0.74
PNKP-206ENST00000595792 MIR7-3HGQ8N6C7 128 aa10.43□□□□□ -0.74
PNKP-206ENST00000595792 PMCHL2Q9BQD1 86 aa10.43□□□□□ -0.74
PNKP-206ENST00000595792 MYMXA0A1B0GTQ4 84 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BKO60814 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BJP06899 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BOP23527 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BBP33778 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BDP58876 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BCP62807 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
PNKP-206ENST00000595792 MEIG1Q5JSS6 88 aa10.41□□□□□ -0.74
PNKP-206ENST00000595792 LEPROTO15243 131 aa10.4□□□□□ -0.74
PNKP-206ENST00000595792 IGKCP01834 107 aa10.4□□□□□ -0.74
PNKP-206ENST00000595792 NCR3O14931 201 aa10.39□□□□□ -0.75
PNKP-206ENST00000595792 NMUP48645 174 aa10.39□□□□□ -0.75
PNKP-206ENST00000595792 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
PNKP-206ENST00000595792 RETNLBQ9BQ08 111 aa10.39□□□□□ -0.75
PNKP-206ENST00000595792 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
PNKP-206ENST00000595792 DAND5Q8N907 189 aa10.38□□□□□ -0.75
PNKP-206ENST00000595792 J3QQQ9 107 aa10.36□□□□□ -0.75
PNKP-206ENST00000595792 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
PNKP-206ENST00000595792 LGALS3P17931 250 aaKnown RBP10.35□□□□□ -0.75
PNKP-206ENST00000595792 SPRR1AP35321 89 aa10.35□□□□□ -0.75
PNKP-206ENST00000595792 HIGD2AQ9BW72 106 aa10.35□□□□□ -0.75
PNKP-206ENST00000595792 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
PNKP-206ENST00000595792 SYS1-DBNDD2H3BUS1 97 aa10.34□□□□□ -0.75
PNKP-206ENST00000595792 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
PNKP-206ENST00000595792 PET117Q6UWS5 81 aa10.34□□□□□ -0.75
PNKP-206ENST00000595792 C3orf22Q8N5N4 141 aa10.34□□□□□ -0.75
PNKP-206ENST00000595792 LINC00304Q8N9R0 145 aa10.34□□□□□ -0.75
PNKP-206ENST00000595792 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
PNKP-206ENST00000595792 TRBV10-3A0A0K0K1G6 114 aa10.33□□□□□ -0.76
PNKP-206ENST00000595792 PRYO14603 147 aa10.33□□□□□ -0.76
PNKP-206ENST00000595792 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
PNKP-206ENST00000595792 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
PNKP-206ENST00000595792 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
PNKP-206ENST00000595792 EIF4EBP3O60516 100 aaPredicted RBP10.31□□□□□ -0.76
PNKP-206ENST00000595792 AKR1D1P51857 326 aa10.31□□□□□ -0.76
PNKP-206ENST00000595792 S100A12P80511 92 aa10.31□□□□□ -0.76
PNKP-206ENST00000595792 SPRR4Q96PI1 79 aa10.31□□□□□ -0.76
PNKP-206ENST00000595792 E9PLD3 99 aa10.3□□□□□ -0.76
PNKP-206ENST00000595792 SOSTDC1Q6X4U4 206 aa10.3□□□□□ -0.76
PNKP-206ENST00000595792 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
PNKP-206ENST00000595792 LINC01545Q5VT33 79 aa10.29□□□□□ -0.76
PNKP-206ENST00000595792 MIEN1Q9BRT3 115 aa10.29□□□□□ -0.76
PNKP-206ENST00000595792 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
PNKP-206ENST00000595792 SMCR5Q8TEV8 140 aa10.28□□□□□ -0.76
PNKP-206ENST00000595792 A0A0J9YXY3 114 aa10.27□□□□□ -0.77
PNKP-206ENST00000595792 C20orf202A1L168 122 aa10.27□□□□□ -0.77
PNKP-206ENST00000595792 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
PNKP-206ENST00000595792 NPC2P61916 151 aa10.25□□□□□ -0.77
PNKP-206ENST00000595792 ETDCA0A1B0GVM5 59 aa10.24□□□□□ -0.77
PNKP-206ENST00000595792 B5MCH6 92 aa10.24□□□□□ -0.77
PNKP-206ENST00000595792 ERC2-IT1O76042 136 aa10.24□□□□□ -0.77
PNKP-206ENST00000595792 DDTP30046 118 aa10.24□□□□□ -0.77
PNKP-206ENST00000595792 MUC17Q685J3 4493 aa10.24□□□□□ -0.77
PNKP-206ENST00000595792 C3orf79P0CE67 100 aa10.23□□□□□ -0.77
PNKP-206ENST00000595792 PPDPFQ9H3Y8 114 aa10.23□□□□□ -0.77
PNKP-206ENST00000595792 NDUFC2O95298 119 aa10.22□□□□□ -0.77
PNKP-206ENST00000595792 KRTDAPP60985 99 aa10.22□□□□□ -0.77
PNKP-206ENST00000595792 LITAFQ99732 161 aa10.22□□□□□ -0.77
PNKP-206ENST00000595792 Q9BRP9 147 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms