RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 C10orf25Q5T742 122 aa10.53□□□□□ -0.72
USHBP1-204ENST00000594190 C6orf48Q9UBA6 75 aa10.53□□□□□ -0.72
USHBP1-204ENST00000594190 LOC107984156A0A0G2JMH3 177 aa10.52□□□□□ -0.73
USHBP1-204ENST00000594190 A0A0U1RRA0 63 aa10.52□□□□□ -0.73
USHBP1-204ENST00000594190 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
USHBP1-204ENST00000594190 Q6ZRU5 148 aa10.52□□□□□ -0.73
USHBP1-204ENST00000594190 ARL17AQ8IVW1 177 aa10.52□□□□□ -0.73
USHBP1-204ENST00000594190 LINC00526Q96FQ7 95 aa10.52□□□□□ -0.73
USHBP1-204ENST00000594190 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
USHBP1-204ENST00000594190 A4D1N5 150 aa10.51□□□□□ -0.73
USHBP1-204ENST00000594190 DAND5Q8N907 189 aa10.51□□□□□ -0.73
USHBP1-204ENST00000594190 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
USHBP1-204ENST00000594190 A0A0B4J2C4 111 aa10.5□□□□□ -0.73
USHBP1-204ENST00000594190 TLX1NBP0CAT3 122 aa10.5□□□□□ -0.73
USHBP1-204ENST00000594190 CNBPP62633 177 aaKnown RBP10.5□□□□□ -0.73
USHBP1-204ENST00000594190 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
USHBP1-204ENST00000594190 NDUFC2-KCTD14E9PQ53 114 aa10.49□□□□□ -0.73
USHBP1-204ENST00000594190 LRCOL1A6NCL2 159 aa10.48□□□□□ -0.73
USHBP1-204ENST00000594190 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
USHBP1-204ENST00000594190 C9orf116Q5BN46 136 aaPredicted RBP10.48□□□□□ -0.73
USHBP1-204ENST00000594190 RAB37Q96AX2 223 aa10.48□□□□□ -0.73
USHBP1-204ENST00000594190 LECT2O14960 151 aa10.47□□□□□ -0.73
USHBP1-204ENST00000594190 NDUFC2O95298 119 aa10.47□□□□□ -0.73
USHBP1-204ENST00000594190 NPC2P61916 151 aa10.47□□□□□ -0.73
USHBP1-204ENST00000594190 SND1-IT1Q9HBX3 110 aa10.47□□□□□ -0.73
USHBP1-204ENST00000594190 CFC1BP0CG36 223 aa10.46□□□□□ -0.73
USHBP1-204ENST00000594190 CFC1P0CG37 223 aa10.46□□□□□ -0.73
USHBP1-204ENST00000594190 FUSP35637 526 aaKnown RBP eCLIP10.46□□□□□ -0.73
USHBP1-204ENST00000594190 SOSTDC1Q6X4U4 206 aa10.46□□□□□ -0.73
USHBP1-204ENST00000594190 PGPEP1Q9NXJ5 209 aa10.46□□□□□ -0.73
USHBP1-204ENST00000594190 A0A087WTM6 91 aa10.45□□□□□ -0.74
USHBP1-204ENST00000594190 INAFM2P0DMQ5 153 aa10.45□□□□□ -0.74
USHBP1-204ENST00000594190 XGP55808 180 aa10.45□□□□□ -0.74
USHBP1-204ENST00000594190 PRO1854Q9UHT4 67 aa10.45□□□□□ -0.74
USHBP1-204ENST00000594190 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
USHBP1-204ENST00000594190 HERC1Q15751 4861 aa10.44□□□□□ -0.74
USHBP1-204ENST00000594190 SLPIP03973 132 aa10.44□□□□□ -0.74
USHBP1-204ENST00000594190 WFDC2Q14508 124 aa10.44□□□□□ -0.74
USHBP1-204ENST00000594190 TRAV13-2A0A0B4J235 113 aa10.43□□□□□ -0.74
USHBP1-204ENST00000594190 LOC107984640A0A0U1RRK4 108 aa10.43□□□□□ -0.74
USHBP1-204ENST00000594190 Q8N814 137 aa10.43□□□□□ -0.74
USHBP1-204ENST00000594190 TAX1BP3O14907 124 aa10.42□□□□□ -0.74
USHBP1-204ENST00000594190 K7ERJ3 54 aa10.41□□□□□ -0.74
USHBP1-204ENST00000594190 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-204ENST00000594190 KRTAP10-1P60331 282 aa10.41□□□□□ -0.74
USHBP1-204ENST00000594190 C9orf118A6NHY6 69 aa10.4□□□□□ -0.74
USHBP1-204ENST00000594190 TRBV10-2A0A0K0K1G8 114 aa10.39□□□□□ -0.75
USHBP1-204ENST00000594190 RPL18AQ02543 176 aaKnown RBP10.39□□□□□ -0.75
USHBP1-204ENST00000594190 Q6ZRP5 223 aa10.39□□□□□ -0.75
USHBP1-204ENST00000594190 MYCBP2O75592 4640 aa10.38□□□□□ -0.75
USHBP1-204ENST00000594190 LYRM7Q5U5X0 104 aa10.38□□□□□ -0.75
USHBP1-204ENST00000594190 C9orf163Q8N9P6 203 aa10.38□□□□□ -0.75
USHBP1-204ENST00000594190 PLA2G2DQ9UNK4 145 aa10.38□□□□□ -0.75
USHBP1-204ENST00000594190 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
USHBP1-204ENST00000594190 GAGE2EQ4V326 116 aa10.37□□□□□ -0.75
USHBP1-204ENST00000594190 GAGE2DQ9UEU5 116 aa10.37□□□□□ -0.75
USHBP1-204ENST00000594190 CBY1Q9Y3M2 126 aa10.37□□□□□ -0.75
USHBP1-204ENST00000594190 XAGE1AQ9HD64 81 aa10.36□□□□□ -0.75
USHBP1-204ENST00000594190 IGKV2-28A0A075B6P5 120 aa10.35□□□□□ -0.75
USHBP1-204ENST00000594190 TSPAN13O95857 204 aa10.35□□□□□ -0.75
USHBP1-204ENST00000594190 IGKV2D-28P01615 120 aa10.35□□□□□ -0.75
USHBP1-204ENST00000594190 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
USHBP1-204ENST00000594190 Q1RN00 199 aa10.35□□□□□ -0.75
USHBP1-204ENST00000594190 TMEM126AQ9H061 195 aa10.35□□□□□ -0.75
USHBP1-204ENST00000594190 LINC00474Q9P2X8 69 aa10.35□□□□□ -0.75
USHBP1-204ENST00000594190 H3BUT2 72 aa10.34□□□□□ -0.75
USHBP1-204ENST00000594190 Q5VSD8 79 aa10.34□□□□□ -0.75
USHBP1-204ENST00000594190 FABP2P12104 132 aa10.33□□□□□ -0.76
USHBP1-204ENST00000594190 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
USHBP1-204ENST00000594190 A0A1W2PPM0 123 aa10.32□□□□□ -0.76
USHBP1-204ENST00000594190 COX6CP09669 75 aa10.32□□□□□ -0.76
USHBP1-204ENST00000594190 VPREB1P12018 145 aa10.32□□□□□ -0.76
USHBP1-204ENST00000594190 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
USHBP1-204ENST00000594190 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
USHBP1-204ENST00000594190 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
USHBP1-204ENST00000594190 IGLV5-37A0A075B6J1 123 aa10.31□□□□□ -0.76
USHBP1-204ENST00000594190 M0R378 163 aa10.31□□□□□ -0.76
USHBP1-204ENST00000594190 PSMB2P49721 201 aa10.31□□□□□ -0.76
USHBP1-204ENST00000594190 S100A7L2Q5SY68 101 aa10.31□□□□□ -0.76
USHBP1-204ENST00000594190 NKAPP1Q8N9T2 125 aa10.31□□□□□ -0.76
USHBP1-204ENST00000594190 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
USHBP1-204ENST00000594190 H7C2G1 150 aa10.3□□□□□ -0.76
USHBP1-204ENST00000594190 RPL28P46779 137 aaKnown RBP10.29□□□□□ -0.76
USHBP1-204ENST00000594190 IGLV5-52A0A0A0MRZ9 124 aa10.28□□□□□ -0.76
USHBP1-204ENST00000594190 A0A1B0GV90 55 aa10.28□□□□□ -0.76
USHBP1-204ENST00000594190 NCR3O14931 201 aa10.28□□□□□ -0.76
USHBP1-204ENST00000594190 IGLV6-57P01721 117 aa10.28□□□□□ -0.76
USHBP1-204ENST00000594190 VAMP3Q15836 100 aa10.28□□□□□ -0.76
USHBP1-204ENST00000594190 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
USHBP1-204ENST00000594190 TRBV20-1A0A075B6N2 111 aa10.27□□□□□ -0.77
USHBP1-204ENST00000594190 A0A096LNI7 61 aa10.27□□□□□ -0.77
USHBP1-204ENST00000594190 SCGB1C2P0DMR2 95 aa10.27□□□□□ -0.77
USHBP1-204ENST00000594190 GTF2H5Q6ZYL4 71 aa10.27□□□□□ -0.77
USHBP1-204ENST00000594190 Q8NDZ9 215 aa10.27□□□□□ -0.77
USHBP1-204ENST00000594190 FAM30AQ9NZY2 134 aa10.27□□□□□ -0.77
USHBP1-204ENST00000594190 FLG2Q5D862 2391 aaPredicted RBP10.27□□□□□ -0.77
USHBP1-204ENST00000594190 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
USHBP1-204ENST00000594190 FAM229AH3BQW9 127 aa10.25□□□□□ -0.77
USHBP1-204ENST00000594190 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-204ENST00000594190 HAMPP81172 84 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms