RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
USE1-203ENST00000593597 COX17Q14061 63 aa6.03□□□□□ -1.44
USE1-203ENST00000593597 KRTAP13-3Q3SY46 172 aa6.03□□□□□ -1.44
USE1-203ENST00000593597 UQCC3Q6UW78 93 aa6.03□□□□□ -1.44
USE1-203ENST00000593597 SMCO4Q9NRQ5 59 aa6.03□□□□□ -1.44
USE1-203ENST00000593597 NDUFA6P56556 154 aa6.02□□□□□ -1.45
USE1-203ENST00000593597 RPL24P83731 157 aaKnown RBP6.02□□□□□ -1.45
USE1-203ENST00000593597 DAND5Q8N907 189 aa6.02□□□□□ -1.45
USE1-203ENST00000593597 SEC11CQ9BY50 192 aa6.02□□□□□ -1.45
USE1-203ENST00000593597 A0A0U1RRA0 63 aa6.01□□□□□ -1.45
USE1-203ENST00000593597 KRTAP4-16G5E9R7 235 aaPredicted RBP6.01□□□□□ -1.45
USE1-203ENST00000593597 HBDP02042 147 aa6.01□□□□□ -1.45
USE1-203ENST00000593597 S100PP25815 95 aa6.01□□□□□ -1.45
USE1-203ENST00000593597 SPRR1AP35321 89 aa6.01□□□□□ -1.45
USE1-203ENST00000593597 C10orf91Q5T1B1 145 aa6.01□□□□□ -1.45
USE1-203ENST00000593597 LINC00614P0C842 121 aa6□□□□□ -1.45
USE1-203ENST00000593597 COX19Q49B96 90 aa6□□□□□ -1.45
USE1-203ENST00000593597 TMEM170BQ5T4T1 132 aa6□□□□□ -1.45
USE1-203ENST00000593597 BAGE3Q86Y29 109 aa6□□□□□ -1.45
USE1-203ENST00000593597 Q8NBF4 154 aa6□□□□□ -1.45
USE1-203ENST00000593597 TMEM223A0PJW6 202 aa5.99□□□□□ -1.45
USE1-203ENST00000593597 FP248Q71RG6 208 aaPredicted RBP5.99□□□□□ -1.45
USE1-203ENST00000593597 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
USE1-203ENST00000593597 NCR3O14931 201 aa5.98□□□□□ -1.45
USE1-203ENST00000593597 SMIM13P0DJ93 91 aa5.98□□□□□ -1.45
USE1-203ENST00000593597 LINC00158P58513 81 aa5.98□□□□□ -1.45
USE1-203ENST00000593597 ASB16-AS1Q495Z4 193 aa5.98□□□□□ -1.45
USE1-203ENST00000593597 SPAG11AQ6PDA7 123 aa5.98□□□□□ -1.45
USE1-203ENST00000593597 FSIP2Q5CZC0 6907 aa5.98□□□□□ -1.45
USE1-203ENST00000593597 PRYO14603 147 aa5.97□□□□□ -1.45
USE1-203ENST00000593597 LINC00483Q53H64 154 aa5.97□□□□□ -1.45
USE1-203ENST00000593597 COMMD7Q86VX2 200 aa5.97□□□□□ -1.45
USE1-203ENST00000593597 RPS10P5Q9NQ39 176 aa5.97□□□□□ -1.45
USE1-203ENST00000593597 TRAPPC1Q9Y5R8 145 aa5.97□□□□□ -1.45
USE1-203ENST00000593597 ERC2-IT1O76042 136 aa5.96□□□□□ -1.46
USE1-203ENST00000593597 RHEBQ15382 184 aa5.96□□□□□ -1.46
USE1-203ENST00000593597 SFTA2Q6UW10 78 aa5.96□□□□□ -1.46
USE1-203ENST00000593597 LINC00337Q8N6G1 96 aa5.96□□□□□ -1.46
USE1-203ENST00000593597 KCNQ1DNQ9H478 68 aa5.96□□□□□ -1.46
USE1-203ENST00000593597 CHTOPQ9Y3Y2 248 aaKnown RBP5.96□□□□□ -1.46
USE1-203ENST00000593597 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
USE1-203ENST00000593597 BOD1L2Q8IYS8 172 aa5.95□□□□□ -1.46
USE1-203ENST00000593597 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
USE1-203ENST00000593597 ZNF706Q9Y5V0 76 aaPredicted RBP5.95□□□□□ -1.46
USE1-203ENST00000593597 TRAV12-1A0A0B4J245 112 aa5.94□□□□□ -1.46
USE1-203ENST00000593597 TSPEAR-AS2P59090 65 aa5.94□□□□□ -1.46
USE1-203ENST00000593597 LCE2CQ5TA81 110 aa5.94□□□□□ -1.46
USE1-203ENST00000593597 Q8N377 158 aa5.94□□□□□ -1.46
USE1-203ENST00000593597 B5MCH6 92 aa5.93□□□□□ -1.46
USE1-203ENST00000593597 KRTAP19-2Q3LHN2 52 aa5.93□□□□□ -1.46
USE1-203ENST00000593597 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
USE1-203ENST00000593597 YPEL4Q96NS1 127 aa5.93□□□□□ -1.46
USE1-203ENST00000593597 Q9BRP9 147 aa5.93□□□□□ -1.46
USE1-203ENST00000593597 SPINK1P00995 79 aa5.92□□□□□ -1.46
USE1-203ENST00000593597 MOBPQ13875 183 aa5.92□□□□□ -1.46
USE1-203ENST00000593597 IFI27L1Q96BM0 104 aa5.92□□□□□ -1.46
USE1-203ENST00000593597 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
USE1-203ENST00000593597 ETDCA0A1B0GVM5 59 aa5.91□□□□□ -1.46
USE1-203ENST00000593597 C4orf48Q5BLP8 95 aa5.91□□□□□ -1.46
USE1-203ENST00000593597 MEIG1Q5JSS6 88 aa5.91□□□□□ -1.46
USE1-203ENST00000593597 GAGE2AQ6NT46 116 aa5.91□□□□□ -1.46
USE1-203ENST00000593597 XP32Q5T750 250 aa5.9□□□□□ -1.46
USE1-203ENST00000593597 NDUFA12Q9UI09 145 aa5.9□□□□□ -1.46
USE1-203ENST00000593597 LOC107984156A0A0G2JMH3 177 aa5.89□□□□□ -1.47
USE1-203ENST00000593597 LINC00310P59036 64 aa5.89□□□□□ -1.47
USE1-203ENST00000593597 HERV-K104P63124 156 aa5.89□□□□□ -1.47
USE1-203ENST00000593597 ARL17AQ8IVW1 177 aa5.89□□□□□ -1.47
USE1-203ENST00000593597 EIF4EBP3O60516 100 aaPredicted RBP5.88□□□□□ -1.47
USE1-203ENST00000593597 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
USE1-203ENST00000593597 SEC61BP60468 96 aaKnown RBP5.88□□□□□ -1.47
USE1-203ENST00000593597 RPS29P62273 56 aaKnown RBP5.88□□□□□ -1.47
USE1-203ENST00000593597 FAM19A2Q8N3H0 131 aa5.88□□□□□ -1.47
USE1-203ENST00000593597 CHCHD1Q96BP2 118 aaKnown RBP5.88□□□□□ -1.47
USE1-203ENST00000593597 DDTP30046 118 aa5.87□□□□□ -1.47
USE1-203ENST00000593597 SOSTDC1Q6X4U4 206 aa5.87□□□□□ -1.47
USE1-203ENST00000593597 Q6ZRX8 168 aa5.87□□□□□ -1.47
USE1-203ENST00000593597 SSBP3-AS1Q7Z2R9 100 aa5.87□□□□□ -1.47
USE1-203ENST00000593597 ATP6V1G1O75348 118 aa5.86□□□□□ -1.47
USE1-203ENST00000593597 APOC3P02656 99 aa5.86□□□□□ -1.47
USE1-203ENST00000593597 ST20-AS1Q8NBB2 130 aa5.86□□□□□ -1.47
USE1-203ENST00000593597 TRBV10-2A0A0K0K1G8 114 aa5.85□□□□□ -1.47
USE1-203ENST00000593597 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
USE1-203ENST00000593597 LEPROTO15243 131 aa5.85□□□□□ -1.47
USE1-203ENST00000593597 IGLV6-57P01721 117 aa5.85□□□□□ -1.47
USE1-203ENST00000593597 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
USE1-203ENST00000593597 H0Y8G0 127 aa5.84□□□□□ -1.47
USE1-203ENST00000593597 SLC25A20O43772 301 aa5.84□□□□□ -1.47
USE1-203ENST00000593597 MT1HP80294 61 aa5.83□□□□□ -1.48
USE1-203ENST00000593597 PMCHL2Q9BQD1 86 aa5.83□□□□□ -1.48
USE1-203ENST00000593597 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
USE1-203ENST00000593597 LINC00587B1AMM8 73 aa5.82□□□□□ -1.48
USE1-203ENST00000593597 J3QQQ9 107 aa5.82□□□□□ -1.48
USE1-203ENST00000593597 HSBP1O75506 76 aa5.82□□□□□ -1.48
USE1-203ENST00000593597 ADAMTSL4-AS1Q5T5F5 129 aa5.82□□□□□ -1.48
USE1-203ENST00000593597 MAP1LC3CQ9BXW4 147 aa5.82□□□□□ -1.48
USE1-203ENST00000593597 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
USE1-203ENST00000593597 TRAV23DV6A0A075B6W5 121 aa5.81□□□□□ -1.48
USE1-203ENST00000593597 SERF1AO75920 110 aa5.81□□□□□ -1.48
USE1-203ENST00000593597 SNAPINO95295 136 aa5.81□□□□□ -1.48
USE1-203ENST00000593597 NDUFC2O95298 119 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms