RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 HSPB8Q9UJY1 196 aa8.05□□□□□ -1.12
H3F3B-213ENST00000593254 LINC01549A6NIU2 74 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 M0QXV9 152 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 IGLV7-43P04211 117 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 KRTDAPP60985 99 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 CKS1BP61024 79 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 C6orf226Q5I0X4 101 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 SCGB3A1Q96QR1 104 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 VAMP8Q9BV40 100 aa8.04□□□□□ -1.12
H3F3B-213ENST00000593254 GEMIN7Q9H840 131 aaKnown RBP8.04□□□□□ -1.12
H3F3B-213ENST00000593254 LEPROTL1O95214 131 aa8.03□□□□□ -1.12
H3F3B-213ENST00000593254 PET117Q6UWS5 81 aa8.03□□□□□ -1.12
H3F3B-213ENST00000593254 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
H3F3B-213ENST00000593254 FAM19A2Q8N3H0 131 aa8.03□□□□□ -1.12
H3F3B-213ENST00000593254 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
H3F3B-213ENST00000593254 IGLV5-45A0A087WSX0 123 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 TINCRA0A1B0GVN0 87 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 SMIM1B2RUZ4 78 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 F8VRH5 84 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 SYS1-DBNDD2H3BUS1 97 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 LINC00469Q8N7U9 141 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 DIRC1Q969H9 104 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 MAP1LC3CQ9BXW4 147 aa8.01□□□□□ -1.13
H3F3B-213ENST00000593254 CXCL5P42830 114 aa8□□□□□ -1.13
H3F3B-213ENST00000593254 UBE2BP63146 152 aa8□□□□□ -1.13
H3F3B-213ENST00000593254 C14orf144Q96I85 54 aa8□□□□□ -1.13
H3F3B-213ENST00000593254 MIEN1Q9BRT3 115 aa8□□□□□ -1.13
H3F3B-213ENST00000593254 PRO1933Q9H354 126 aa8□□□□□ -1.13
H3F3B-213ENST00000593254 CST9LQ9H4G1 147 aa8□□□□□ -1.13
H3F3B-213ENST00000593254 H0Y9J4 135 aa7.99□□□□□ -1.13
H3F3B-213ENST00000593254 HBDP02042 147 aa7.99□□□□□ -1.13
H3F3B-213ENST00000593254 PMVKQ15126 192 aa7.98□□□□□ -1.13
H3F3B-213ENST00000593254 LINC01545Q5VT33 79 aa7.98□□□□□ -1.13
H3F3B-213ENST00000593254 XAGE1AQ9HD64 81 aa7.98□□□□□ -1.13
H3F3B-213ENST00000593254 KRTAP4-8A0A0G2JLE6 195 aa7.97□□□□□ -1.13
H3F3B-213ENST00000593254 COX7B2Q8TF08 81 aa7.97□□□□□ -1.13
H3F3B-213ENST00000593254 UQCR10Q9UDW1 63 aa7.97□□□□□ -1.13
H3F3B-213ENST00000593254 C22orf24Q9Y442 160 aa7.97□□□□□ -1.13
H3F3B-213ENST00000593254 A0A096LNJ9 63 aa7.96□□□□□ -1.14
H3F3B-213ENST00000593254 SPATA45Q537H7 98 aa7.96□□□□□ -1.14
H3F3B-213ENST00000593254 PAM16Q9Y3D7 125 aa7.96□□□□□ -1.14
H3F3B-213ENST00000593254 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
H3F3B-213ENST00000593254 SPINK8P0C7L1 97 aa7.95□□□□□ -1.14
H3F3B-213ENST00000593254 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
H3F3B-213ENST00000593254 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
H3F3B-213ENST00000593254 TP73-AS1Q9UF72 201 aa7.95□□□□□ -1.14
H3F3B-213ENST00000593254 M0R143 59 aa7.94□□□□□ -1.14
H3F3B-213ENST00000593254 HSBP1L1C9JCN9 74 aa7.93□□□□□ -1.14
H3F3B-213ENST00000593254 H3BRM9 83 aa7.93□□□□□ -1.14
H3F3B-213ENST00000593254 MRPL55Q7Z7F7 128 aaKnown RBP7.93□□□□□ -1.14
H3F3B-213ENST00000593254 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
H3F3B-213ENST00000593254 ZNF861PO60384 105 aa7.92□□□□□ -1.14
H3F3B-213ENST00000593254 ATP5LO75964 103 aa7.92□□□□□ -1.14
H3F3B-213ENST00000593254 IFI27L1Q96BM0 104 aa7.92□□□□□ -1.14
H3F3B-213ENST00000593254 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
H3F3B-213ENST00000593254 PMCHL2Q9BQD1 86 aa7.91□□□□□ -1.14
H3F3B-213ENST00000593254 ZNF22P17026 224 aaPredicted RBP7.9□□□□□ -1.14
H3F3B-213ENST00000593254 IGLV5-37A0A075B6J1 123 aa7.89□□□□□ -1.15
H3F3B-213ENST00000593254 A0A0U1RQV1 116 aa7.89□□□□□ -1.15
H3F3B-213ENST00000593254 LINC00167Q96N53 147 aa7.89□□□□□ -1.15
H3F3B-213ENST00000593254 SNHG12Q9BXW3 62 aa7.89□□□□□ -1.15
H3F3B-213ENST00000593254 TRAV12-1A0A0B4J245 112 aa7.87□□□□□ -1.15
H3F3B-213ENST00000593254 DLEU1O43261 78 aa7.87□□□□□ -1.15
H3F3B-213ENST00000593254 BCE1O60756 84 aa7.87□□□□□ -1.15
H3F3B-213ENST00000593254 RPL13AP40429 203 aaKnown RBP7.87□□□□□ -1.15
H3F3B-213ENST00000593254 ATOH7Q8N100 152 aa7.87□□□□□ -1.15
H3F3B-213ENST00000593254 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
H3F3B-213ENST00000593254 RPL37AP8A6NKH3 93 aa7.86□□□□□ -1.15
H3F3B-213ENST00000593254 GHRHP01286 108 aa7.86□□□□□ -1.15
H3F3B-213ENST00000593254 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
H3F3B-213ENST00000593254 SLC25A34Q6PIV7 304 aa7.86□□□□□ -1.15
H3F3B-213ENST00000593254 GAGE10A6NGK3 116 aa7.85□□□□□ -1.15
H3F3B-213ENST00000593254 COX8AP10176 69 aa7.85□□□□□ -1.15
H3F3B-213ENST00000593254 PFN2P35080 140 aa7.85□□□□□ -1.15
H3F3B-213ENST00000593254 NKAPP1Q8N9T2 125 aa7.85□□□□□ -1.15
H3F3B-213ENST00000593254 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
H3F3B-213ENST00000593254 COX17Q14061 63 aa7.83□□□□□ -1.16
H3F3B-213ENST00000593254 COL5A1-AS1Q5SY13 56 aa7.83□□□□□ -1.16
H3F3B-213ENST00000593254 TMEM170BQ5T4T1 132 aa7.83□□□□□ -1.16
H3F3B-213ENST00000593254 SFTA2Q6UW10 78 aa7.83□□□□□ -1.16
H3F3B-213ENST00000593254 KRTAP13-1Q8IUC0 172 aa7.83□□□□□ -1.16
H3F3B-213ENST00000593254 SND1-IT1Q9HBX3 110 aa7.83□□□□□ -1.16
H3F3B-213ENST00000593254 DPM2O94777 84 aa7.82□□□□□ -1.16
H3F3B-213ENST00000593254 VPREB1P12018 145 aa7.82□□□□□ -1.16
H3F3B-213ENST00000593254 PLNP26678 52 aa7.82□□□□□ -1.16
H3F3B-213ENST00000593254 BOD1L2Q8IYS8 172 aa7.82□□□□□ -1.16
H3F3B-213ENST00000593254 ZNF625Q96I27 306 aaPredicted RBP7.82□□□□□ -1.16
H3F3B-213ENST00000593254 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
H3F3B-213ENST00000593254 IGKV2-28A0A075B6P5 120 aa7.81□□□□□ -1.16
H3F3B-213ENST00000593254 IGKV2D-28P01615 120 aa7.81□□□□□ -1.16
H3F3B-213ENST00000593254 IGKCP01834 107 aa7.81□□□□□ -1.16
H3F3B-213ENST00000593254 A0A087X002 238 aa7.8□□□□□ -1.16
H3F3B-213ENST00000593254 H0Y8G0 127 aa7.8□□□□□ -1.16
H3F3B-213ENST00000593254 A0A1B0GV90 55 aa7.79□□□□□ -1.16
H3F3B-213ENST00000593254 TMEM223A0PJW6 202 aa7.79□□□□□ -1.16
H3F3B-213ENST00000593254 UBE2AP49459 152 aa7.79□□□□□ -1.16
H3F3B-213ENST00000593254 RPL24P83731 157 aaKnown RBP7.79□□□□□ -1.16
H3F3B-213ENST00000593254 ANKRD39Q53RE8 183 aa7.79□□□□□ -1.16
H3F3B-213ENST00000593254 Q8NDZ9 215 aa7.79□□□□□ -1.16
H3F3B-213ENST00000593254 CRYGAP11844 174 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms