RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
RANBP3-229ENST00000592771 TMEM256-PLSCR3K7ERE1 68 aa9.68□□□□□ -0.86
RANBP3-229ENST00000592771 ATOX1O00244 68 aa9.68□□□□□ -0.86
RANBP3-229ENST00000592771 LINC00269Q8N2A0 174 aa9.68□□□□□ -0.86
RANBP3-229ENST00000592771 NANOS2P60321 138 aaKnown RBP9.68□□□□□ -0.86
RANBP3-229ENST00000592771 REG3AQ06141 175 aa9.68□□□□□ -0.86
RANBP3-229ENST00000592771 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
RANBP3-229ENST00000592771 CLPSL2Q6UWE3 100 aa9.68□□□□□ -0.86
RANBP3-229ENST00000592771 Q8N814 137 aa9.68□□□□□ -0.86
RANBP3-229ENST00000592771 CCKP06307 115 aa9.67□□□□□ -0.86
RANBP3-229ENST00000592771 SVIPQ8NHG7 77 aa9.67□□□□□ -0.86
RANBP3-229ENST00000592771 LINC00526Q96FQ7 95 aa9.67□□□□□ -0.86
RANBP3-229ENST00000592771 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
RANBP3-229ENST00000592771 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
RANBP3-229ENST00000592771 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
RANBP3-229ENST00000592771 Q6ZTC4 211 aa9.66□□□□□ -0.86
RANBP3-229ENST00000592771 TENM3Q9P273 2699 aa9.65□□□□□ -0.86
RANBP3-229ENST00000592771 A0A0J9YWU9 116 aa9.65□□□□□ -0.86
RANBP3-229ENST00000592771 NCR3O14931 201 aa9.65□□□□□ -0.86
RANBP3-229ENST00000592771 KPRPQ5T749 579 aaPredicted RBP9.65□□□□□ -0.86
RANBP3-229ENST00000592771 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
RANBP3-229ENST00000592771 COX7CP15954 63 aa9.64□□□□□ -0.87
RANBP3-229ENST00000592771 PRR34Q9NV39 138 aa9.64□□□□□ -0.87
RANBP3-229ENST00000592771 NOTCH1P46531 2555 aa9.64□□□□□ -0.87
RANBP3-229ENST00000592771 ATP5EP2Q5VTU8 51 aa9.64□□□□□ -0.87
RANBP3-229ENST00000592771 H3BQ85 93 aa9.63□□□□□ -0.87
RANBP3-229ENST00000592771 SLPIP03973 132 aa9.63□□□□□ -0.87
RANBP3-229ENST00000592771 C9orf153Q5TBE3 101 aa9.63□□□□□ -0.87
RANBP3-229ENST00000592771 DNHD1Q96M86 4753 aa9.63□□□□□ -0.87
RANBP3-229ENST00000592771 RPL18AQ02543 176 aaKnown RBP9.62□□□□□ -0.87
RANBP3-229ENST00000592771 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
RANBP3-229ENST00000592771 GVQW2A0A096LPI5 108 aaPredicted RBP9.6□□□□□ -0.87
RANBP3-229ENST00000592771 K7EIL1 84 aa9.6□□□□□ -0.87
RANBP3-229ENST00000592771 TM2D3Q9BRN9 247 aa9.6□□□□□ -0.87
RANBP3-229ENST00000592771 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
RANBP3-229ENST00000592771 CRYGAP11844 174 aa9.6□□□□□ -0.87
RANBP3-229ENST00000592771 LINC00575Q6W349 94 aa9.6□□□□□ -0.87
RANBP3-229ENST00000592771 C2orf48Q96LS8 159 aa9.6□□□□□ -0.87
RANBP3-229ENST00000592771 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
RANBP3-229ENST00000592771 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
RANBP3-229ENST00000592771 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
RANBP3-229ENST00000592771 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
RANBP3-229ENST00000592771 NBEAL1Q6ZS30 2694 aa9.59□□□□□ -0.87
RANBP3-229ENST00000592771 MGAM2Q2M2H8 2515 aa9.59□□□□□ -0.87
RANBP3-229ENST00000592771 DEFB131BA0A096LNP1 70 aa9.58□□□□□ -0.88
RANBP3-229ENST00000592771 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
RANBP3-229ENST00000592771 TRBV10-3A0A0K0K1G6 114 aa9.58□□□□□ -0.88
RANBP3-229ENST00000592771 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
RANBP3-229ENST00000592771 IGKV3D-7A0A0C4DH55 119 aa9.57□□□□□ -0.88
RANBP3-229ENST00000592771 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
RANBP3-229ENST00000592771 ESRGQ1W209 222 aa9.56□□□□□ -0.88
RANBP3-229ENST00000592771 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
RANBP3-229ENST00000592771 hADV29S1A0JD25 119 aa9.56□□□□□ -0.88
RANBP3-229ENST00000592771 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
RANBP3-229ENST00000592771 HUWE1Q7Z6Z7 4374 aaKnown RBP9.55□□□□□ -0.88
RANBP3-229ENST00000592771 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
RANBP3-229ENST00000592771 SMIM20Q8N5G0 67 aa9.55□□□□□ -0.88
RANBP3-229ENST00000592771 SERP2Q8N6R1 65 aa9.55□□□□□ -0.88
RANBP3-229ENST00000592771 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
RANBP3-229ENST00000592771 GHRHP01286 108 aa9.54□□□□□ -0.88
RANBP3-229ENST00000592771 PDE6GP18545 87 aa9.54□□□□□ -0.88
RANBP3-229ENST00000592771 UNQ6190/PRO20217Q6UXQ8 127 aa9.54□□□□□ -0.88
RANBP3-229ENST00000592771 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
RANBP3-229ENST00000592771 RBM3P98179 157 aaKnown RBP9.53□□□□□ -0.88
RANBP3-229ENST00000592771 C10orf25Q5T742 122 aa9.53□□□□□ -0.88
RANBP3-229ENST00000592771 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
RANBP3-229ENST00000592771 Q8NDZ9 215 aa9.53□□□□□ -0.88
RANBP3-229ENST00000592771 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.88
RANBP3-229ENST00000592771 USP17L23D6RBM5 183 aa9.52□□□□□ -0.88
RANBP3-229ENST00000592771 KRTAP26-1Q6PEX3 210 aa9.52□□□□□ -0.88
RANBP3-229ENST00000592771 LINC01556Q5JQF7 62 aa9.52□□□□□ -0.89
RANBP3-229ENST00000592771 TRBV7-6A0A0J9YX20 115 aa9.5□□□□□ -0.89
RANBP3-229ENST00000592771 Q6ZQT0 140 aa9.5□□□□□ -0.89
RANBP3-229ENST00000592771 MRAPQ8TCY5 172 aa9.5□□□□□ -0.89
RANBP3-229ENST00000592771 BCE1O60756 84 aa9.49□□□□□ -0.89
RANBP3-229ENST00000592771 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
RANBP3-229ENST00000592771 A0A087WVE0 104 aa9.48□□□□□ -0.89
RANBP3-229ENST00000592771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.48□□□□□ -0.89
RANBP3-229ENST00000592771 TRAV23DV6A0A075B6W5 121 aa9.47□□□□□ -0.89
RANBP3-229ENST00000592771 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
RANBP3-229ENST00000592771 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
RANBP3-229ENST00000592771 LAMTOR3Q9UHA4 124 aa9.47□□□□□ -0.89
RANBP3-229ENST00000592771 RPS28P62857 69 aaKnown RBP9.46□□□□□ -0.89
RANBP3-229ENST00000592771 DSCR8Q96T75 97 aa9.46□□□□□ -0.89
RANBP3-229ENST00000592771 UPK3BQ9BT76 320 aa9.46□□□□□ -0.89
RANBP3-229ENST00000592771 F8WDY8 70 aa9.46□□□□□ -0.9
RANBP3-229ENST00000592771 TMEM258P61165 79 aa9.46□□□□□ -0.9
RANBP3-229ENST00000592771 Q6ZQY7 126 aa9.44□□□□□ -0.9
RANBP3-229ENST00000592771 J3KT08 172 aa9.43□□□□□ -0.9
RANBP3-229ENST00000592771 ZNF73O43830 326 aaPredicted RBP9.43□□□□□ -0.9
RANBP3-229ENST00000592771 COX7BP24311 80 aa9.43□□□□□ -0.9
RANBP3-229ENST00000592771 ELOF1P60002 83 aaKnown RBP9.43□□□□□ -0.9
RANBP3-229ENST00000592771 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
RANBP3-229ENST00000592771 DNAH9Q9NYC9 4486 aa9.43□□□□□ -0.9
RANBP3-229ENST00000592771 C15orf56Q8N910 161 aa9.43□□□□□ -0.9
RANBP3-229ENST00000592771 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
RANBP3-229ENST00000592771 M0R378 163 aa9.42□□□□□ -0.9
RANBP3-229ENST00000592771 CAMK2N2Q96S95 79 aa9.42□□□□□ -0.9
RANBP3-229ENST00000592771 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
RANBP3-229ENST00000592771 VPREB1P12018 145 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms