RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 LYPD5Q6UWN5 251 aa13.21□□□□□ -0.29
MBD3-207ENST00000590550 FP248Q71RG6 208 aaPredicted RBP13.21□□□□□ -0.29
MBD3-207ENST00000590550 IGLV10-54A0A075B6I4 117 aa13.21□□□□□ -0.29
MBD3-207ENST00000590550 A0A0U1RQV1 116 aa13.21□□□□□ -0.29
MBD3-207ENST00000590550 IBA57-AS1B1ANH7 110 aa13.2□□□□□ -0.3
MBD3-207ENST00000590550 DEFB135Q30KP9 77 aa13.2□□□□□ -0.3
MBD3-207ENST00000590550 PRR3P79522 188 aaKnown RBP13.2□□□□□ -0.3
MBD3-207ENST00000590550 UBL5Q9BZL1 73 aa13.2□□□□□ -0.3
MBD3-207ENST00000590550 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
MBD3-207ENST00000590550 ATP5EP2Q5VTU8 51 aa13.2□□□□□ -0.3
MBD3-207ENST00000590550 EPM2AB3EWF7 344 aa13.19□□□□□ -0.3
MBD3-207ENST00000590550 LINC00269Q8N2A0 174 aa13.18□□□□□ -0.3
MBD3-207ENST00000590550 F8WEM9 126 aa13.17□□□□□ -0.3
MBD3-207ENST00000590550 LINC00612Q8N6U2 182 aa13.17□□□□□ -0.3
MBD3-207ENST00000590550 BRK1Q8WUW1 75 aa13.17□□□□□ -0.3
MBD3-207ENST00000590550 PRO0255Q9UI72 69 aa13.17□□□□□ -0.3
MBD3-207ENST00000590550 NSD1Q96L73 2696 aaPredicted RBP13.16□□□□□ -0.3
MBD3-207ENST00000590550 TRAV10A0A0B4J240 114 aa13.16□□□□□ -0.3
MBD3-207ENST00000590550 RBM3P98179 157 aaKnown RBP13.15□□□□□ -0.3
MBD3-207ENST00000590550 TRAV7A0A075B6U4 112 aa13.15□□□□□ -0.31
MBD3-207ENST00000590550 SMIM26A0A096LP01 95 aa13.15□□□□□ -0.31
MBD3-207ENST00000590550 JMJD7-PLA2G4BH0Y9G9 81 aa13.15□□□□□ -0.31
MBD3-207ENST00000590550 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.31
MBD3-207ENST00000590550 HAMPP81172 84 aa13.14□□□□□ -0.31
MBD3-207ENST00000590550 A0A1B0GUV1 79 aa13.12□□□□□ -0.31
MBD3-207ENST00000590550 LY6G6DO95868 133 aa13.12□□□□□ -0.31
MBD3-207ENST00000590550 ANGP03950 147 aaKnown RBP13.12□□□□□ -0.31
MBD3-207ENST00000590550 J3QKU1 62 aa13.12□□□□□ -0.31
MBD3-207ENST00000590550 HIVEP1P15822 2718 aa13.11□□□□□ -0.31
MBD3-207ENST00000590550 F8WDY8 70 aa13.11□□□□□ -0.31
MBD3-207ENST00000590550 HTN3P15516 51 aa13.11□□□□□ -0.31
MBD3-207ENST00000590550 Q8N814 137 aa13.11□□□□□ -0.31
MBD3-207ENST00000590550 CELA1Q9UNI1 258 aa13.1□□□□□ -0.31
MBD3-207ENST00000590550 Q8IZM0 81 aa13.1□□□□□ -0.31
MBD3-207ENST00000590550 IGHV4-28A0A0C4DH34 117 aa13.09□□□□□ -0.31
MBD3-207ENST00000590550 TRBV7-6A0A0J9YX20 115 aa13.09□□□□□ -0.31
MBD3-207ENST00000590550 M0R2N4 97 aa13.09□□□□□ -0.31
MBD3-207ENST00000590550 CHCHD10Q8WYQ3 142 aaPredicted RBP13.09□□□□□ -0.31
MBD3-207ENST00000590550 TEP1Q99973 2627 aaKnown RBP13.09□□□□□ -0.31
MBD3-207ENST00000590550 TMEM256-PLSCR3K7ERE1 68 aa13.09□□□□□ -0.31
MBD3-207ENST00000590550 KLKP1Q107X0 134 aa13.09□□□□□ -0.31
MBD3-207ENST00000590550 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
MBD3-207ENST00000590550 INAFM1C9JVW0 142 aa13.08□□□□□ -0.32
MBD3-207ENST00000590550 REG3AQ06141 175 aa13.07□□□□□ -0.32
MBD3-207ENST00000590550 KIAA0087Q14695 138 aa13.07□□□□□ -0.32
MBD3-207ENST00000590550 LINC01547P58512 204 aaPredicted RBP13.06□□□□□ -0.32
MBD3-207ENST00000590550 DAD1P61803 113 aa13.06□□□□□ -0.32
MBD3-207ENST00000590550 MPLKIPQ8TAP9 179 aa13.06□□□□□ -0.32
MBD3-207ENST00000590550 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
MBD3-207ENST00000590550 Q8NDZ9 215 aa13.06□□□□□ -0.32
MBD3-207ENST00000590550 NANOS2P60321 138 aaKnown RBP13.05□□□□□ -0.32
MBD3-207ENST00000590550 CD164L2Q6UWJ8 174 aa13.05□□□□□ -0.32
MBD3-207ENST00000590550 C1orf195Q5TG92 126 aa13.04□□□□□ -0.32
MBD3-207ENST00000590550 C6orf223Q8N319 242 aa13.04□□□□□ -0.32
MBD3-207ENST00000590550 LYRM9A8MSI8 78 aa13.04□□□□□ -0.32
MBD3-207ENST00000590550 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
MBD3-207ENST00000590550 LINC00167Q96N53 147 aa13.03□□□□□ -0.32
MBD3-207ENST00000590550 TM2D3Q9BRN9 247 aa13.03□□□□□ -0.32
MBD3-207ENST00000590550 C9orf66Q5T8R8 295 aa13.03□□□□□ -0.32
MBD3-207ENST00000590550 SEC61GP60059 68 aa13.02□□□□□ -0.32
MBD3-207ENST00000590550 C10orf25Q5T742 122 aa13.02□□□□□ -0.32
MBD3-207ENST00000590550 LAMTOR3Q9UHA4 124 aa13.02□□□□□ -0.32
MBD3-207ENST00000590550 V9GYY9 64 aa13.02□□□□□ -0.32
MBD3-207ENST00000590550 PKD1L1Q8TDX9 2849 aa13.01□□□□□ -0.33
MBD3-207ENST00000590550 Q6ZVQ6 151 aa13.01□□□□□ -0.33
MBD3-207ENST00000590550 Q6ZQT0 140 aa13□□□□□ -0.33
MBD3-207ENST00000590550 FAM229BQ4G0N7 80 aa13□□□□□ -0.33
MBD3-207ENST00000590550 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
MBD3-207ENST00000590550 Q8NAQ8 132 aa12.99□□□□□ -0.33
MBD3-207ENST00000590550 C6orf99Q4VX62 202 aa12.98□□□□□ -0.33
MBD3-207ENST00000590550 KLK12Q9UKR0 248 aa12.98□□□□□ -0.33
MBD3-207ENST00000590550 APOC4P55056 127 aa12.97□□□□□ -0.33
MBD3-207ENST00000590550 MIFP14174 115 aa12.96□□□□□ -0.33
MBD3-207ENST00000590550 BCE1O60756 84 aa12.95□□□□□ -0.34
MBD3-207ENST00000590550 SPAG11BQ08648 103 aa12.94□□□□□ -0.34
MBD3-207ENST00000590550 CYSRT1A8MQ03 144 aa12.92□□□□□ -0.34
MBD3-207ENST00000590550 IGHV4-30-4P0DP06 118 aa12.92□□□□□ -0.34
MBD3-207ENST00000590550 SPART-AS1P0CW21 52 aa12.92□□□□□ -0.34
MBD3-207ENST00000590550 COX17Q14061 63 aa12.92□□□□□ -0.34
MBD3-207ENST00000590550 TRBV7-4A0A0J9YYF1 115 aa12.91□□□□□ -0.34
MBD3-207ENST00000590550 NREPQ16612 68 aa12.9□□□□□ -0.34
MBD3-207ENST00000590550 ZNF561-AS1K7EIQ3 104 aa12.89□□□□□ -0.35
MBD3-207ENST00000590550 NDUFC1O43677 76 aa12.89□□□□□ -0.35
MBD3-207ENST00000590550 LELP1Q5T871 98 aa12.89□□□□□ -0.35
MBD3-207ENST00000590550 TMEM254Q8TBM7 123 aa12.89□□□□□ -0.35
MBD3-207ENST00000590550 LINC00575Q6W349 94 aa12.88□□□□□ -0.35
MBD3-207ENST00000590550 XAGE1AQ9HD64 81 aa12.88□□□□□ -0.35
MBD3-207ENST00000590550 RETNQ9HD89 108 aa12.88□□□□□ -0.35
MBD3-207ENST00000590550 TENM3Q9P273 2699 aa12.88□□□□□ -0.35
MBD3-207ENST00000590550 LOC110117498A0A087WWA1 95 aa12.87□□□□□ -0.35
MBD3-207ENST00000590550 Q8N9L7 120 aa12.86□□□□□ -0.35
MBD3-207ENST00000590550 CXCL6P80162 114 aa12.85□□□□□ -0.35
MBD3-207ENST00000590550 Q6ZQY7 126 aa12.85□□□□□ -0.35
MBD3-207ENST00000590550 ATP5EP56381 51 aaPredicted RBP12.85□□□□□ -0.35
MBD3-207ENST00000590550 BPY2O14599 106 aa12.84□□□□□ -0.35
MBD3-207ENST00000590550 HIGD2BQ4VC39 106 aa12.83□□□□□ -0.36
MBD3-207ENST00000590550 PRR34Q9NV39 138 aa12.83□□□□□ -0.36
MBD3-207ENST00000590550 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
MBD3-207ENST00000590550 STAB1Q9NY15 2570 aa12.82□□□□□ -0.36
MBD3-207ENST00000590550 OXLD1Q5BKU9 147 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1108.9 ms