RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 SND1-IT1Q9HBX3 110 aa5.99□□□□□ -1.45
RETREG3-209ENST00000590035 ATP5LO75964 103 aa5.98□□□□□ -1.45
RETREG3-209ENST00000590035 UBE2AP49459 152 aa5.98□□□□□ -1.45
RETREG3-209ENST00000590035 RAB14P61106 215 aa5.98□□□□□ -1.45
RETREG3-209ENST00000590035 PRLHP81277 87 aa5.98□□□□□ -1.45
RETREG3-209ENST00000590035 PLEKHB2Q96CS7 222 aa5.98□□□□□ -1.45
RETREG3-209ENST00000590035 RETNLBQ9BQ08 111 aa5.98□□□□□ -1.45
RETREG3-209ENST00000590035 TMEM238C9JI98 176 aa5.97□□□□□ -1.45
RETREG3-209ENST00000590035 H3BRM9 83 aa5.97□□□□□ -1.45
RETREG3-209ENST00000590035 COX17Q14061 63 aa5.97□□□□□ -1.45
RETREG3-209ENST00000590035 COX19Q49B96 90 aa5.97□□□□□ -1.45
RETREG3-209ENST00000590035 ZNF625Q96I27 306 aaPredicted RBP5.97□□□□□ -1.45
RETREG3-209ENST00000590035 SEC11CQ9BY50 192 aa5.97□□□□□ -1.45
RETREG3-209ENST00000590035 ERG28Q9UKR5 140 aa5.97□□□□□ -1.45
RETREG3-209ENST00000590035 PFN2P35080 140 aa5.96□□□□□ -1.46
RETREG3-209ENST00000590035 IFITM2Q01629 132 aa5.96□□□□□ -1.46
RETREG3-209ENST00000590035 C10orf91Q5T1B1 145 aa5.96□□□□□ -1.46
RETREG3-209ENST00000590035 FA2HQ7L5A8 372 aa5.95□□□□□ -1.46
RETREG3-209ENST00000590035 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
RETREG3-209ENST00000590035 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
RETREG3-209ENST00000590035 IGKV2D-26A0A0A0MRZ7 120 aa5.94□□□□□ -1.46
RETREG3-209ENST00000590035 C11orf86A6NJI1 115 aa5.94□□□□□ -1.46
RETREG3-209ENST00000590035 FAM19A1Q7Z5A9 133 aa5.94□□□□□ -1.46
RETREG3-209ENST00000590035 C18orf32Q8TCD1 76 aa5.94□□□□□ -1.46
RETREG3-209ENST00000590035 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
RETREG3-209ENST00000590035 S100PP25815 95 aa5.93□□□□□ -1.46
RETREG3-209ENST00000590035 RPL24P83731 157 aaKnown RBP5.93□□□□□ -1.46
RETREG3-209ENST00000590035 FABP9Q0Z7S8 132 aa5.93□□□□□ -1.46
RETREG3-209ENST00000590035 SFTA2Q6UW10 78 aa5.93□□□□□ -1.46
RETREG3-209ENST00000590035 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
RETREG3-209ENST00000590035 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
RETREG3-209ENST00000590035 HBDP02042 147 aa5.92□□□□□ -1.46
RETREG3-209ENST00000590035 SPRR1AP35321 89 aa5.92□□□□□ -1.46
RETREG3-209ENST00000590035 SMCO4Q9NRQ5 59 aa5.92□□□□□ -1.46
RETREG3-209ENST00000590035 LINC00614P0C842 121 aa5.91□□□□□ -1.46
RETREG3-209ENST00000590035 RHEBQ15382 184 aa5.91□□□□□ -1.46
RETREG3-209ENST00000590035 CBLN2Q8IUK8 224 aa5.91□□□□□ -1.46
RETREG3-209ENST00000590035 PPDPFQ9H3Y8 114 aa5.91□□□□□ -1.46
RETREG3-209ENST00000590035 PMCHL1Q16048 86 aa5.9□□□□□ -1.46
RETREG3-209ENST00000590035 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.46
RETREG3-209ENST00000590035 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
RETREG3-209ENST00000590035 TMEM223A0PJW6 202 aa5.89□□□□□ -1.47
RETREG3-209ENST00000590035 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
RETREG3-209ENST00000590035 BAGE3Q86Y29 109 aa5.89□□□□□ -1.47
RETREG3-209ENST00000590035 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
RETREG3-209ENST00000590035 TMA7Q9Y2S6 64 aaKnown RBP5.89□□□□□ -1.47
RETREG3-209ENST00000590035 NDUFA6P56556 154 aa5.88□□□□□ -1.47
RETREG3-209ENST00000590035 LINC00483Q53H64 154 aa5.88□□□□□ -1.47
RETREG3-209ENST00000590035 LINC00337Q8N6G1 96 aa5.88□□□□□ -1.47
RETREG3-209ENST00000590035 HIGD2AQ9BW72 106 aa5.88□□□□□ -1.47
RETREG3-209ENST00000590035 TRAV12-1A0A0B4J245 112 aa5.87□□□□□ -1.47
RETREG3-209ENST00000590035 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
RETREG3-209ENST00000590035 PRYO14603 147 aa5.87□□□□□ -1.47
RETREG3-209ENST00000590035 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
RETREG3-209ENST00000590035 SMCR5Q8TEV8 140 aa5.87□□□□□ -1.47
RETREG3-209ENST00000590035 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
RETREG3-209ENST00000590035 TRAPPC1Q9Y5R8 145 aa5.87□□□□□ -1.47
RETREG3-209ENST00000590035 ASB16-AS1Q495Z4 193 aa5.86□□□□□ -1.47
RETREG3-209ENST00000590035 COMMD7Q86VX2 200 aa5.86□□□□□ -1.47
RETREG3-209ENST00000590035 YPEL4Q96NS1 127 aa5.86□□□□□ -1.47
RETREG3-209ENST00000590035 RPS10P5Q9NQ39 176 aa5.86□□□□□ -1.47
RETREG3-209ENST00000590035 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
RETREG3-209ENST00000590035 LOC107984156A0A0G2JMH3 177 aa5.85□□□□□ -1.47
RETREG3-209ENST00000590035 SMIM13P0DJ93 91 aa5.85□□□□□ -1.47
RETREG3-209ENST00000590035 LINC00158P58513 81 aa5.85□□□□□ -1.47
RETREG3-209ENST00000590035 ARL17AQ8IVW1 177 aa5.85□□□□□ -1.47
RETREG3-209ENST00000590035 Q8NBF4 154 aa5.85□□□□□ -1.47
RETREG3-209ENST00000590035 ZNF706Q9Y5V0 76 aaPredicted RBP5.85□□□□□ -1.47
RETREG3-209ENST00000590035 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
RETREG3-209ENST00000590035 DAND5Q8N907 189 aa5.84□□□□□ -1.47
RETREG3-209ENST00000590035 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
RETREG3-209ENST00000590035 SPINK1P00995 79 aa5.83□□□□□ -1.48
RETREG3-209ENST00000590035 RPS29P62273 56 aaKnown RBP5.83□□□□□ -1.48
RETREG3-209ENST00000590035 BOD1L2Q8IYS8 172 aa5.83□□□□□ -1.48
RETREG3-209ENST00000590035 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
RETREG3-209ENST00000590035 TRBV10-3A0A0K0K1G6 114 aa5.82□□□□□ -1.48
RETREG3-209ENST00000590035 B5MCH6 92 aa5.82□□□□□ -1.48
RETREG3-209ENST00000590035 HERV-K104P63124 156 aa5.82□□□□□ -1.48
RETREG3-209ENST00000590035 IFI27L1Q96BM0 104 aa5.82□□□□□ -1.48
RETREG3-209ENST00000590035 CHCHD1Q96BP2 118 aaKnown RBP5.82□□□□□ -1.48
RETREG3-209ENST00000590035 NCR3O14931 201 aa5.81□□□□□ -1.48
RETREG3-209ENST00000590035 ERC2-IT1O76042 136 aa5.81□□□□□ -1.48
RETREG3-209ENST00000590035 TSPEAR-AS2P59090 65 aa5.81□□□□□ -1.48
RETREG3-209ENST00000590035 Q8N377 158 aa5.8□□□□□ -1.48
RETREG3-209ENST00000590035 Q9BRP9 147 aa5.8□□□□□ -1.48
RETREG3-209ENST00000590035 NDUFA12Q9UI09 145 aa5.8□□□□□ -1.48
RETREG3-209ENST00000590035 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
RETREG3-209ENST00000590035 ETDCA0A1B0GVM5 59 aa5.79□□□□□ -1.48
RETREG3-209ENST00000590035 SSBP3-AS1Q7Z2R9 100 aa5.79□□□□□ -1.48
RETREG3-209ENST00000590035 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
RETREG3-209ENST00000590035 LINC00587B1AMM8 73 aa5.78□□□□□ -1.48
RETREG3-209ENST00000590035 MEIG1Q5JSS6 88 aa5.78□□□□□ -1.48
RETREG3-209ENST00000590035 Q6ZRX8 168 aa5.78□□□□□ -1.48
RETREG3-209ENST00000590035 MYMXA0A1B0GTQ4 84 aa5.77□□□□□ -1.49
RETREG3-209ENST00000590035 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
RETREG3-209ENST00000590035 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
RETREG3-209ENST00000590035 APOC3P02656 99 aa5.77□□□□□ -1.49
RETREG3-209ENST00000590035 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
RETREG3-209ENST00000590035 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
RETREG3-209ENST00000590035 GAGE2AQ6NT46 116 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms