RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 HIST1H2BNQ99877 126 aa8.46□□□□□ -1.06
SAFB2-205ENST00000590000 HIST1H2BMQ99879 126 aa8.46□□□□□ -1.06
SAFB2-205ENST00000590000 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
SAFB2-205ENST00000590000 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
SAFB2-205ENST00000590000 HSPB8Q9UJY1 196 aa8.45□□□□□ -1.06
SAFB2-205ENST00000590000 SND1-IT1Q9HBX3 110 aa8.44□□□□□ -1.06
SAFB2-205ENST00000590000 LINC00158P58513 81 aa8.43□□□□□ -1.06
SAFB2-205ENST00000590000 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
SAFB2-205ENST00000590000 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
SAFB2-205ENST00000590000 TP73-AS1Q9UF72 201 aa8.42□□□□□ -1.06
SAFB2-205ENST00000590000 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
SAFB2-205ENST00000590000 COX17Q14061 63 aa8.41□□□□□ -1.06
SAFB2-205ENST00000590000 Q8NDZ9 215 aa8.41□□□□□ -1.06
SAFB2-205ENST00000590000 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
SAFB2-205ENST00000590000 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
SAFB2-205ENST00000590000 DPM2O94777 84 aa8.4□□□□□ -1.06
SAFB2-205ENST00000590000 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
SAFB2-205ENST00000590000 NDUFA12Q9UI09 145 aa8.4□□□□□ -1.06
SAFB2-205ENST00000590000 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
SAFB2-205ENST00000590000 IGKCP01834 107 aa8.39□□□□□ -1.07
SAFB2-205ENST00000590000 VPREB1P12018 145 aa8.39□□□□□ -1.07
SAFB2-205ENST00000590000 TSPEAR-AS2P59090 65 aa8.39□□□□□ -1.07
SAFB2-205ENST00000590000 PRR4Q16378 134 aa8.39□□□□□ -1.07
SAFB2-205ENST00000590000 IGKV2-28A0A075B6P5 120 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 LEPROTO15243 131 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 ZNF861PO60384 105 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 ATP6V1G1O75348 118 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 IGKV2D-28P01615 120 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 PLNP26678 52 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
SAFB2-205ENST00000590000 MYMXA0A1B0GTQ4 84 aa8.36□□□□□ -1.07
SAFB2-205ENST00000590000 SYS1-DBNDD2H3BUS1 97 aa8.36□□□□□ -1.07
SAFB2-205ENST00000590000 BCE1O60756 84 aa8.36□□□□□ -1.07
SAFB2-205ENST00000590000 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
SAFB2-205ENST00000590000 MIR7-3HGQ8N6C7 128 aa8.36□□□□□ -1.07
SAFB2-205ENST00000590000 PLEKHB2Q96CS7 222 aa8.36□□□□□ -1.07
SAFB2-205ENST00000590000 J3QQQ9 107 aa8.35□□□□□ -1.07
SAFB2-205ENST00000590000 HERV-K104P63124 156 aa8.35□□□□□ -1.07
SAFB2-205ENST00000590000 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
SAFB2-205ENST00000590000 HERVK_113P61574 105 aa8.34□□□□□ -1.07
SAFB2-205ENST00000590000 A0A087X002 238 aa8.33□□□□□ -1.08
SAFB2-205ENST00000590000 LGALS3P17931 250 aaKnown RBP8.33□□□□□ -1.08
SAFB2-205ENST00000590000 BOD1L2Q8IYS8 172 aa8.33□□□□□ -1.08
SAFB2-205ENST00000590000 DAND5Q8N907 189 aa8.33□□□□□ -1.08
SAFB2-205ENST00000590000 TSPAN13O95857 204 aa8.32□□□□□ -1.08
SAFB2-205ENST00000590000 RPL28P46779 137 aaKnown RBP8.32□□□□□ -1.08
SAFB2-205ENST00000590000 UBE2AP49459 152 aa8.32□□□□□ -1.08
SAFB2-205ENST00000590000 COA6Q5JTJ3 125 aaKnown RBP8.32□□□□□ -1.08
SAFB2-205ENST00000590000 KRTAP9-6A0A140TA67 174 aa8.31□□□□□ -1.08
SAFB2-205ENST00000590000 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
SAFB2-205ENST00000590000 M0R378 163 aa8.31□□□□□ -1.08
SAFB2-205ENST00000590000 C3orf79P0CE67 100 aa8.31□□□□□ -1.08
SAFB2-205ENST00000590000 PET117Q6UWS5 81 aa8.31□□□□□ -1.08
SAFB2-205ENST00000590000 NCR3O14931 201 aa8.3□□□□□ -1.08
SAFB2-205ENST00000590000 S100A1P23297 94 aa8.3□□□□□ -1.08
SAFB2-205ENST00000590000 KRTDAPP60985 99 aa8.3□□□□□ -1.08
SAFB2-205ENST00000590000 LINC01545Q5VT33 79 aa8.3□□□□□ -1.08
SAFB2-205ENST00000590000 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
SAFB2-205ENST00000590000 TMEM126AQ9H061 195 aa8.3□□□□□ -1.08
SAFB2-205ENST00000590000 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
SAFB2-205ENST00000590000 ANAPC11Q9NYG5 84 aa8.29□□□□□ -1.08
SAFB2-205ENST00000590000 E9PLD3 99 aa8.28□□□□□ -1.08
SAFB2-205ENST00000590000 NMUP48645 174 aa8.28□□□□□ -1.08
SAFB2-205ENST00000590000 PRLHP81277 87 aa8.28□□□□□ -1.08
SAFB2-205ENST00000590000 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
SAFB2-205ENST00000590000 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
SAFB2-205ENST00000590000 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
SAFB2-205ENST00000590000 NPC2P61916 151 aa8.26□□□□□ -1.09
SAFB2-205ENST00000590000 IGKV2D-26A0A0A0MRZ7 120 aa8.25□□□□□ -1.09
SAFB2-205ENST00000590000 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
SAFB2-205ENST00000590000 KRTAP13-2Q52LG2 175 aa8.25□□□□□ -1.09
SAFB2-205ENST00000590000 TTTY13Q9BZ97 58 aa8.25□□□□□ -1.09
SAFB2-205ENST00000590000 LOC107984156A0A0G2JMH3 177 aa8.24□□□□□ -1.09
SAFB2-205ENST00000590000 TRBV10-3A0A0K0K1G6 114 aa8.24□□□□□ -1.09
SAFB2-205ENST00000590000 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
SAFB2-205ENST00000590000 ARL17AQ8IVW1 177 aa8.24□□□□□ -1.09
SAFB2-205ENST00000590000 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
SAFB2-205ENST00000590000 ATOH7Q8N100 152 aa8.23□□□□□ -1.09
SAFB2-205ENST00000590000 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
SAFB2-205ENST00000590000 MIEN1Q9BRT3 115 aa8.21□□□□□ -1.1
SAFB2-205ENST00000590000 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
SAFB2-205ENST00000590000 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
SAFB2-205ENST00000590000 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
SAFB2-205ENST00000590000 PRYO14603 147 aa8.2□□□□□ -1.1
SAFB2-205ENST00000590000 CRYGAP11844 174 aa8.2□□□□□ -1.1
SAFB2-205ENST00000590000 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
SAFB2-205ENST00000590000 HIST3H2BBQ8N257 126 aa8.2□□□□□ -1.1
SAFB2-205ENST00000590000 LITAFQ99732 161 aa8.2□□□□□ -1.1
SAFB2-205ENST00000590000 C20orf202A1L168 122 aa8.19□□□□□ -1.1
SAFB2-205ENST00000590000 DDTP30046 118 aa8.19□□□□□ -1.1
SAFB2-205ENST00000590000 SPRR1AP35321 89 aa8.18□□□□□ -1.1
SAFB2-205ENST00000590000 TYMSOSQ8TAI1 123 aa8.18□□□□□ -1.1
SAFB2-205ENST00000590000 LINC00308Q8TCZ7 52 aa8.18□□□□□ -1.1
SAFB2-205ENST00000590000 SMCR5Q8TEV8 140 aa8.18□□□□□ -1.1
SAFB2-205ENST00000590000 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
SAFB2-205ENST00000590000 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
SAFB2-205ENST00000590000 KRTAP4-16G5E9R7 235 aaPredicted RBP8.17□□□□□ -1.1
SAFB2-205ENST00000590000 NDUFC2O95298 119 aa8.17□□□□□ -1.1
SAFB2-205ENST00000590000 S100A2P29034 98 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms