RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 CBLN2Q8IUK8 224 aa12.29□□□□□ -0.44
TMC6-213ENST00000589933 SLC7A5P1Q8MH63 180 aa12.29□□□□□ -0.44
TMC6-213ENST00000589933 C11orf86A6NJI1 115 aa12.28□□□□□ -0.44
TMC6-213ENST00000589933 ATP6V1G1O75348 118 aa12.28□□□□□ -0.44
TMC6-213ENST00000589933 PMCHL1Q16048 86 aa12.28□□□□□ -0.44
TMC6-213ENST00000589933 M0R378 163 aa12.27□□□□□ -0.45
TMC6-213ENST00000589933 CHTOPQ9Y3Y2 248 aaKnown RBP12.27□□□□□ -0.45
TMC6-213ENST00000589933 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
TMC6-213ENST00000589933 RETNLBQ9BQ08 111 aa12.26□□□□□ -0.45
TMC6-213ENST00000589933 HIGD2AQ9BW72 106 aa12.26□□□□□ -0.45
TMC6-213ENST00000589933 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
TMC6-213ENST00000589933 CDIP1Q9H305 208 aa12.25□□□□□ -0.45
TMC6-213ENST00000589933 ZNF706Q9Y5V0 76 aaPredicted RBP12.23□□□□□ -0.45
TMC6-213ENST00000589933 IGLV7-46A0A075B6I9 117 aa12.22□□□□□ -0.45
TMC6-213ENST00000589933 SPAG11AQ6PDA7 123 aa12.22□□□□□ -0.45
TMC6-213ENST00000589933 TPRXLQ17RH7 258 aa12.21□□□□□ -0.45
TMC6-213ENST00000589933 C4orf48Q5BLP8 95 aa12.21□□□□□ -0.45
TMC6-213ENST00000589933 SVBPQ8N300 66 aa12.21□□□□□ -0.45
TMC6-213ENST00000589933 MUC2Q02817 5179 aa12.21□□□□□ -0.46
TMC6-213ENST00000589933 A0A0U1RRA0 63 aa12.2□□□□□ -0.46
TMC6-213ENST00000589933 LINC00587B1AMM8 73 aa12.2□□□□□ -0.46
TMC6-213ENST00000589933 SNAPINO95295 136 aa12.2□□□□□ -0.46
TMC6-213ENST00000589933 TRAV12-1A0A0B4J245 112 aa12.19□□□□□ -0.46
TMC6-213ENST00000589933 APOC3P02656 99 aa12.19□□□□□ -0.46
TMC6-213ENST00000589933 S100A12P80511 92 aa12.19□□□□□ -0.46
TMC6-213ENST00000589933 MEIG1Q5JSS6 88 aa12.19□□□□□ -0.46
TMC6-213ENST00000589933 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
TMC6-213ENST00000589933 TMEM223A0PJW6 202 aa12.18□□□□□ -0.46
TMC6-213ENST00000589933 Q8NDZ9 215 aa12.18□□□□□ -0.46
TMC6-213ENST00000589933 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
TMC6-213ENST00000589933 PRYO14603 147 aa12.17□□□□□ -0.46
TMC6-213ENST00000589933 HERV-K104P63124 156 aa12.17□□□□□ -0.46
TMC6-213ENST00000589933 C3orf22Q8N5N4 141 aa12.17□□□□□ -0.46
TMC6-213ENST00000589933 SPRR4Q96PI1 79 aa12.17□□□□□ -0.46
TMC6-213ENST00000589933 BOD1L2Q8IYS8 172 aa12.16□□□□□ -0.46
TMC6-213ENST00000589933 MAP1LC3CQ9BXW4 147 aa12.16□□□□□ -0.46
TMC6-213ENST00000589933 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
TMC6-213ENST00000589933 ETDCA0A1B0GVM5 59 aa12.13□□□□□ -0.47
TMC6-213ENST00000589933 PPDPFQ9H3Y8 114 aa12.13□□□□□ -0.47
TMC6-213ENST00000589933 MIR7-3HGQ8N6C7 128 aa12.12□□□□□ -0.47
TMC6-213ENST00000589933 LINC00337Q8N6G1 96 aa12.12□□□□□ -0.47
TMC6-213ENST00000589933 MYMXA0A1B0GTQ4 84 aa12.11□□□□□ -0.47
TMC6-213ENST00000589933 NCR3O14931 201 aa12.1□□□□□ -0.47
TMC6-213ENST00000589933 HSBP1O75506 76 aa12.1□□□□□ -0.47
TMC6-213ENST00000589933 FP248Q71RG6 208 aaPredicted RBP12.1□□□□□ -0.47
TMC6-213ENST00000589933 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
TMC6-213ENST00000589933 NDUFA12Q9UI09 145 aa12.1□□□□□ -0.47
TMC6-213ENST00000589933 SMCR5Q8TEV8 140 aa12.08□□□□□ -0.48
TMC6-213ENST00000589933 SPRR1AP35321 89 aa12.07□□□□□ -0.48
TMC6-213ENST00000589933 Q8NBF4 154 aa12.06□□□□□ -0.48
TMC6-213ENST00000589933 H0Y8G0 127 aa12.05□□□□□ -0.48
TMC6-213ENST00000589933 TRBV10-3A0A0K0K1G6 114 aa12.04□□□□□ -0.48
TMC6-213ENST00000589933 SPINK1P00995 79 aa12.04□□□□□ -0.48
TMC6-213ENST00000589933 FAM19A2Q8N3H0 131 aa12.03□□□□□ -0.48
TMC6-213ENST00000589933 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
TMC6-213ENST00000589933 DAND5Q8N907 189 aa12.02□□□□□ -0.49
TMC6-213ENST00000589933 LEPROTL1O95214 131 aa12.01□□□□□ -0.49
TMC6-213ENST00000589933 HERVK_113P61574 105 aa12.01□□□□□ -0.49
TMC6-213ENST00000589933 GAGE2AQ6NT46 116 aa12.01□□□□□ -0.49
TMC6-213ENST00000589933 KRTAP4-16G5E9R7 235 aaPredicted RBP12□□□□□ -0.49
TMC6-213ENST00000589933 LEPROTO15243 131 aa12□□□□□ -0.49
TMC6-213ENST00000589933 PLNP26678 52 aa12□□□□□ -0.49
TMC6-213ENST00000589933 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
TMC6-213ENST00000589933 DDTP30046 118 aa11.99□□□□□ -0.49
TMC6-213ENST00000589933 LINC00483Q53H64 154 aa11.99□□□□□ -0.49
TMC6-213ENST00000589933 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
TMC6-213ENST00000589933 LCE2AQ5TA79 106 aaPredicted RBP11.98□□□□□ -0.49
TMC6-213ENST00000589933 LOC107984156A0A0G2JMH3 177 aa11.97□□□□□ -0.49
TMC6-213ENST00000589933 B5MCH6 92 aa11.97□□□□□ -0.49
TMC6-213ENST00000589933 NMUP48645 174 aa11.97□□□□□ -0.49
TMC6-213ENST00000589933 S100A7L2Q5SY68 101 aa11.97□□□□□ -0.49
TMC6-213ENST00000589933 SSBP3-AS1Q7Z2R9 100 aa11.97□□□□□ -0.49
TMC6-213ENST00000589933 ARL17AQ8IVW1 177 aa11.97□□□□□ -0.49
TMC6-213ENST00000589933 HSPB8Q9UJY1 196 aa11.97□□□□□ -0.49
TMC6-213ENST00000589933 KRTAP9-2Q9BYQ4 174 aa11.96□□□□□ -0.49
TMC6-213ENST00000589933 SPANXB1Q9NS25 103 aaPredicted RBP11.96□□□□□ -0.49
TMC6-213ENST00000589933 IGLV9-49A0A0B4J1Y8 123 aa11.95□□□□□ -0.5
TMC6-213ENST00000589933 J3QQQ9 107 aa11.95□□□□□ -0.5
TMC6-213ENST00000589933 LGALS3P17931 250 aaKnown RBP11.95□□□□□ -0.5
TMC6-213ENST00000589933 JOSD1Q15040 202 aaPredicted RBP11.95□□□□□ -0.5
TMC6-213ENST00000589933 MOBPQ13875 183 aa11.94□□□□□ -0.5
TMC6-213ENST00000589933 DPM2O94777 84 aa11.93□□□□□ -0.5
TMC6-213ENST00000589933 RPS29P62273 56 aaKnown RBP11.93□□□□□ -0.5
TMC6-213ENST00000589933 Q6ZRX8 168 aa11.93□□□□□ -0.5
TMC6-213ENST00000589933 NDUFC2O95298 119 aa11.92□□□□□ -0.5
TMC6-213ENST00000589933 TRGC2P03986 189 aa11.92□□□□□ -0.5
TMC6-213ENST00000589933 TSPEAR-AS2P59090 65 aa11.92□□□□□ -0.5
TMC6-213ENST00000589933 KRTAP13-3Q3SY46 172 aa11.92□□□□□ -0.5
TMC6-213ENST00000589933 CBY1Q9Y3M2 126 aa11.92□□□□□ -0.5
TMC6-213ENST00000589933 SERF1AO75920 110 aa11.91□□□□□ -0.5
TMC6-213ENST00000589933 IGKCP01834 107 aa11.9□□□□□ -0.5
TMC6-213ENST00000589933 SEC61BP60468 96 aaKnown RBP11.9□□□□□ -0.5
TMC6-213ENST00000589933 SLC25A20O43772 301 aa11.89□□□□□ -0.51
TMC6-213ENST00000589933 ERC2-IT1O76042 136 aa11.89□□□□□ -0.51
TMC6-213ENST00000589933 FABP4P15090 132 aa11.89□□□□□ -0.51
TMC6-213ENST00000589933 HINT1P49773 126 aaPredicted RBP11.89□□□□□ -0.51
TMC6-213ENST00000589933 ASB16-AS1Q495Z4 193 aa11.88□□□□□ -0.51
TMC6-213ENST00000589933 FAT4Q6V0I7 4981 aa11.88□□□□□ -0.51
TMC6-213ENST00000589933 TRAV23DV6A0A075B6W5 121 aa11.87□□□□□ -0.51
TMC6-213ENST00000589933 C9orf153Q5TBE3 101 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms