RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 COX7BP24311 80 aa10.1□□□□□ -0.79
RETREG3-208ENST00000589797 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
RETREG3-208ENST00000589797 TMEM256-PLSCR3K7ERE1 68 aa10.09□□□□□ -0.79
RETREG3-208ENST00000589797 C10orf25Q5T742 122 aa10.09□□□□□ -0.79
RETREG3-208ENST00000589797 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
RETREG3-208ENST00000589797 CITED1Q99966 193 aa10.08□□□□□ -0.8
RETREG3-208ENST00000589797 PLAC8L1A1L4L8 177 aa10.08□□□□□ -0.8
RETREG3-208ENST00000589797 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
RETREG3-208ENST00000589797 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
RETREG3-208ENST00000589797 ESRGQ1W209 222 aa10.06□□□□□ -0.8
RETREG3-208ENST00000589797 ACYP1P07311 99 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 Q8NAQ8 132 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 A0A1B0GX51 115 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 JMJD7-PLA2G4BH0Y9G9 81 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 TRAV23DV6A0A075B6W5 121 aa10.04□□□□□ -0.8
RETREG3-208ENST00000589797 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
RETREG3-208ENST00000589797 LITAFQ99732 161 aa10.03□□□□□ -0.8
RETREG3-208ENST00000589797 PRO0461Q9UI25 63 aa10.02□□□□□ -0.8
RETREG3-208ENST00000589797 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
RETREG3-208ENST00000589797 Q6ZRU5 148 aa10.02□□□□□ -0.81
RETREG3-208ENST00000589797 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.81
RETREG3-208ENST00000589797 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
RETREG3-208ENST00000589797 LINC00643Q86TS7 51 aa10.01□□□□□ -0.81
RETREG3-208ENST00000589797 NREPQ16612 68 aa10□□□□□ -0.81
RETREG3-208ENST00000589797 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
RETREG3-208ENST00000589797 C3orf84H3BNL1 204 aa10□□□□□ -0.81
RETREG3-208ENST00000589797 ZNF73O43830 326 aaPredicted RBP10□□□□□ -0.81
RETREG3-208ENST00000589797 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
RETREG3-208ENST00000589797 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
RETREG3-208ENST00000589797 USP17L23D6RBM5 183 aa9.99□□□□□ -0.81
RETREG3-208ENST00000589797 KRTAP10-11P60412 298 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 ENHOQ6UWT2 76 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 UBE2AP49459 152 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 KLK5Q9Y337 293 aaPredicted RBP9.98□□□□□ -0.81
RETREG3-208ENST00000589797 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
RETREG3-208ENST00000589797 STAB2Q8WWQ8 2551 aa9.97□□□□□ -0.81
RETREG3-208ENST00000589797 COX17Q14061 63 aa9.97□□□□□ -0.81
RETREG3-208ENST00000589797 A0A087WVE0 104 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 CCKP06307 115 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 Q8N814 137 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 ZFHX3Q15911 3703 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 CDIP1Q9H305 208 aa9.95□□□□□ -0.82
RETREG3-208ENST00000589797 NBPF19A0A087WUL8 3843 aa9.94□□□□□ -0.82
RETREG3-208ENST00000589797 M0R378 163 aa9.94□□□□□ -0.82
RETREG3-208ENST00000589797 FBN1P35555 2871 aaKnown RBP9.94□□□□□ -0.82
RETREG3-208ENST00000589797 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 EGFEM1PQ0D2K5 195 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 FAM104AQ969W3 186 aa9.92□□□□□ -0.82
RETREG3-208ENST00000589797 TENM1Q9UKZ4 2725 aa9.92□□□□□ -0.82
RETREG3-208ENST00000589797 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
RETREG3-208ENST00000589797 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
RETREG3-208ENST00000589797 OTOGQ6ZRI0 2925 aa9.91□□□□□ -0.82
RETREG3-208ENST00000589797 VWFP04275 2813 aa9.89□□□□□ -0.83
RETREG3-208ENST00000589797 LY6G6CO95867 125 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 CCDC179H3BU77 68 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 LINC00846Q9NV44 126 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
RETREG3-208ENST00000589797 ATOX1O00244 68 aa9.86□□□□□ -0.83
RETREG3-208ENST00000589797 C20orf197Q8N268 126 aa9.86□□□□□ -0.83
RETREG3-208ENST00000589797 BPY2O14599 106 aa9.86□□□□□ -0.83
RETREG3-208ENST00000589797 C3orf22Q8N5N4 141 aa9.84□□□□□ -0.83
RETREG3-208ENST00000589797 LINC00588Q9Y4M8 146 aa9.84□□□□□ -0.83
RETREG3-208ENST00000589797 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
RETREG3-208ENST00000589797 M0QXV9 152 aa9.83□□□□□ -0.84
RETREG3-208ENST00000589797 NDUFC2O95298 119 aa9.83□□□□□ -0.84
RETREG3-208ENST00000589797 LOC107984640A0A0U1RRK4 108 aa9.82□□□□□ -0.84
RETREG3-208ENST00000589797 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
RETREG3-208ENST00000589797 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
RETREG3-208ENST00000589797 NDUFS5O43920 106 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 PRLHP81277 87 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 PDZD2O15018 2839 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 KIAA0087Q14695 138 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 K7EIL1 84 aa9.8□□□□□ -0.84
RETREG3-208ENST00000589797 C14orf177Q52M58 125 aa9.8□□□□□ -0.84
RETREG3-208ENST00000589797 PDE6GP18545 87 aa9.79□□□□□ -0.84
RETREG3-208ENST00000589797 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
RETREG3-208ENST00000589797 H0Y9J4 135 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.78□□□□□ -0.84
RETREG3-208ENST00000589797 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 Q6ZRP5 223 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 C7orf33Q8WU49 177 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 Q8N9L7 120 aa9.77□□□□□ -0.85
RETREG3-208ENST00000589797 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
RETREG3-208ENST00000589797 FAM168BA1KXE4 195 aa9.77□□□□□ -0.85
RETREG3-208ENST00000589797 FAM240AA0A1B0GVK7 77 aa9.76□□□□□ -0.85
RETREG3-208ENST00000589797 C2orf48Q96LS8 159 aa9.76□□□□□ -0.85
RETREG3-208ENST00000589797 SNURFQ9Y675 71 aa9.76□□□□□ -0.85
RETREG3-208ENST00000589797 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 MRPL55Q7Z7F7 128 aaKnown RBP9.75□□□□□ -0.85
RETREG3-208ENST00000589797 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
RETREG3-208ENST00000589797 B9D2Q9BPU9 175 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 CHTF8P0CG12 524 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 CASC10Q5T4H9 136 aa9.74□□□□□ -0.85
RETREG3-208ENST00000589797 LINC00167Q96N53 147 aa9.74□□□□□ -0.85
RETREG3-208ENST00000589797 MDFIQ99750 246 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms