RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 RNASE4P34096 147 aaKnown RBP4.03□□□□□ -1.76
SMAD4-208ENST00000589706 RPL27AP46776 148 aaKnown RBP4.03□□□□□ -1.76
SMAD4-208ENST00000589706 POLR2KP53803 58 aaKnown RBP4.03□□□□□ -1.76
SMAD4-208ENST00000589706 PHF5AQ7RTV0 110 aaKnown RBP4.03□□□□□ -1.76
SMAD4-208ENST00000589706 C6orf223Q8N319 242 aa4.03□□□□□ -1.76
SMAD4-208ENST00000589706 LINC01006Q8NI28 216 aa4.03□□□□□ -1.76
SMAD4-208ENST00000589706 B9D2Q9BPU9 175 aa4.03□□□□□ -1.76
SMAD4-208ENST00000589706 NDUFA12Q9UI09 145 aa4.03□□□□□ -1.76
SMAD4-208ENST00000589706 SRRM5B3KS81 715 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 F6UB75 175 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 I3L2K1 104 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 NDUFA1O15239 70 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 IGKV1-17P01599 117 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 GPHB5Q86YW7 130 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 MUC7Q8TAX7 377 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 DHRS4-AS1Q9P1J3 65 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 LINC00588Q9Y4M8 146 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 PHLDA3Q9Y5J5 127 aa4.02□□□□□ -1.77
SMAD4-208ENST00000589706 TRAV12-3A0A0B4J271 114 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 TRBV7-4A0A0J9YYF1 115 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 M0R378 163 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 LHBP01229 141 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 IGLV2-23P01705 113 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 CXCL6P80162 114 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 DEFB108BQ8NET1 73 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 LINC00308Q8TCZ7 52 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 RMI2Q96E14 147 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 KRTAP4-5Q9BYR2 181 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 DNAH1Q9P2D7 4330 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 STAB2Q8WWQ8 2551 aa4.01□□□□□ -1.77
SMAD4-208ENST00000589706 IGKV1D-17A0A075B6S4 117 aa4□□□□□ -1.77
SMAD4-208ENST00000589706 A0A0J9YWU9 116 aa4□□□□□ -1.77
SMAD4-208ENST00000589706 FUSP35637 526 aaKnown RBP eCLIP4□□□□□ -1.77
SMAD4-208ENST00000589706 C15orf32Q32M92 178 aa4□□□□□ -1.77
SMAD4-208ENST00000589706 RPL39LQ96EH5 51 aaKnown RBP4□□□□□ -1.77
SMAD4-208ENST00000589706 RNF5Q99942 180 aa4□□□□□ -1.77
SMAD4-208ENST00000589706 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
SMAD4-208ENST00000589706 SACSQ9NZJ4 4579 aa4□□□□□ -1.77
SMAD4-208ENST00000589706 DNAH3Q8TD57 4116 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 TRAV21A0A0B4J279 112 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 LOC100131303A0A0U1RQF7 123 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 DEFB112Q30KQ8 113 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 ENHOQ6UWT2 76 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 Q8TAT8 98 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 ORMDL1Q9P0S3 153 aa3.99□□□□□ -1.77
SMAD4-208ENST00000589706 A0A0J9YXV3 536 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 C8orf87E5RJ46 101 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 H3BQ85 93 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 ZNF73O43830 326 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-208ENST00000589706 MGPP08493 103 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 PDE6GP18545 87 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 UBE2AP49459 152 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 FAM229BQ4G0N7 80 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 HCP5Q6MZN7 132 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 LCA10Q71F78 164 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 C20orf203Q8NBC4 194 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 TMEM254Q8TBM7 123 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 LINC00167Q96N53 147 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 LYSTQ99698 3801 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 SNURFQ9Y675 71 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
SMAD4-208ENST00000589706 DNAH9Q9NYC9 4486 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 CSMD3Q7Z407 3707 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 BUB1B-PAK6H3BSN5 160 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 K7EIM0 57 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 CRPP02741 224 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 CTSGP08311 255 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 S100A4P26447 101 aaKnown RBP3.97□□□□□ -1.77
SMAD4-208ENST00000589706 MRGPRG-AS1Q2M3A8 158 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 C14orf177Q52M58 125 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 C10orf55Q5SWW7 151 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 UNQ9165/PRO28630Q6UXU0 137 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 SOSTDC1Q6X4U4 206 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 Q6ZTC4 211 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 LEAP2Q969E1 77 aa3.97□□□□□ -1.77
SMAD4-208ENST00000589706 K7EMT4 169 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 TMEM256-PLSCR3K7ERE1 68 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 LINC00315P59091 139 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 RPL39P62891 51 aaKnown RBP3.96□□□□□ -1.78
SMAD4-208ENST00000589706 NREPQ16612 68 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 BRD3OSQ6XYD6 125 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 Q8N6K4 173 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 ZNF625Q96I27 306 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-208ENST00000589706 CYP4F30PQ9H0H9 118 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 DPM3Q9P2X0 92 aa3.96□□□□□ -1.78
SMAD4-208ENST00000589706 IGHV3-64A0A075B6Q5 118 aa3.95□□□□□ -1.78
SMAD4-208ENST00000589706 LOC110117498A0A087WWA1 95 aa3.95□□□□□ -1.78
SMAD4-208ENST00000589706 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
SMAD4-208ENST00000589706 WFDC9Q8NEX5 89 aa3.95□□□□□ -1.78
SMAD4-208ENST00000589706 SMAD5-AS1Q9Y6J3 95 aa3.95□□□□□ -1.78
SMAD4-208ENST00000589706 IGKV3-15P01624 115 aa3.94□□□□□ -1.78
SMAD4-208ENST00000589706 SYCNQ0VAF6 134 aa3.94□□□□□ -1.78
SMAD4-208ENST00000589706 FAM19A3Q7Z5A8 133 aa3.94□□□□□ -1.78
SMAD4-208ENST00000589706 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
SMAD4-208ENST00000589706 MIR7-3HGQ8N6C7 128 aa3.94□□□□□ -1.78
SMAD4-208ENST00000589706 DIRC1Q969H9 104 aa3.94□□□□□ -1.78
SMAD4-208ENST00000589706 TRAV10A0A0B4J240 114 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms