RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 NPC2P61916 151 aa13.61□□□□□ -0.23
R3HDM4-204ENST00000589428 Q6ZRP5 223 aa13.61□□□□□ -0.23
R3HDM4-204ENST00000589428 HAMPP81172 84 aa13.6□□□□□ -0.23
R3HDM4-204ENST00000589428 Q6ZVH6 145 aa13.6□□□□□ -0.23
R3HDM4-204ENST00000589428 HSD52Q0P140 79 aa13.59□□□□□ -0.23
R3HDM4-204ENST00000589428 SOSTDC1Q6X4U4 206 aa13.59□□□□□ -0.23
R3HDM4-204ENST00000589428 SND1-IT1Q9HBX3 110 aa13.59□□□□□ -0.23
R3HDM4-204ENST00000589428 RPL18AQ02543 176 aaKnown RBP13.59□□□□□ -0.23
R3HDM4-204ENST00000589428 LINC00308Q8TCZ7 52 aa13.59□□□□□ -0.23
R3HDM4-204ENST00000589428 LOC107984640A0A0U1RRK4 108 aa13.58□□□□□ -0.24
R3HDM4-204ENST00000589428 TAL2Q16559 108 aa13.58□□□□□ -0.24
R3HDM4-204ENST00000589428 HERC2O95714 4834 aa13.57□□□□□ -0.24
R3HDM4-204ENST00000589428 GAGE2EQ4V326 116 aa13.57□□□□□ -0.24
R3HDM4-204ENST00000589428 GAGE2DQ9UEU5 116 aa13.57□□□□□ -0.24
R3HDM4-204ENST00000589428 MUSTN1Q8IVN3 82 aa13.56□□□□□ -0.24
R3HDM4-204ENST00000589428 XAGE1AQ9HD64 81 aa13.56□□□□□ -0.24
R3HDM4-204ENST00000589428 IFITM1P13164 125 aa13.56□□□□□ -0.24
R3HDM4-204ENST00000589428 PTTG1IPP53801 180 aa13.56□□□□□ -0.24
R3HDM4-204ENST00000589428 SCXQ7RTU7 201 aa13.56□□□□□ -0.24
R3HDM4-204ENST00000589428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.56□□□□□ -0.24
R3HDM4-204ENST00000589428 CEND1Q8N111 149 aa13.55□□□□□ -0.24
R3HDM4-204ENST00000589428 A0A096LNI7 61 aa13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 IGKV2-24A0A0C4DH68 120 aa13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 CHTF8P0CG12 524 aa13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 GAGE2BQ13066 116 aa13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 LOC107984156A0A0G2JMH3 177 aa13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 C9orf129Q5T035 196 aaKnown RBP13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 ARL17AQ8IVW1 177 aa13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 DPH3Q96FX2 82 aa13.53□□□□□ -0.24
R3HDM4-204ENST00000589428 PANO1I0J062 215 aa13.52□□□□□ -0.25
R3HDM4-204ENST00000589428 FXYD2P54710 66 aa13.52□□□□□ -0.25
R3HDM4-204ENST00000589428 CIRBP-AS1Q8TBR5 109 aa13.52□□□□□ -0.25
R3HDM4-204ENST00000589428 HINT1P49773 126 aaPredicted RBP13.51□□□□□ -0.25
R3HDM4-204ENST00000589428 SPACA4Q8TDM5 124 aa13.51□□□□□ -0.25
R3HDM4-204ENST00000589428 COPS9Q8WXC6 57 aa13.51□□□□□ -0.25
R3HDM4-204ENST00000589428 SNHG12Q9BXW3 62 aa13.51□□□□□ -0.25
R3HDM4-204ENST00000589428 PPDPFQ9H3Y8 114 aa13.51□□□□□ -0.25
R3HDM4-204ENST00000589428 LINC00474Q9P2X8 69 aa13.51□□□□□ -0.25
R3HDM4-204ENST00000589428 M0R143 59 aa13.5□□□□□ -0.25
R3HDM4-204ENST00000589428 BVES-AS1Q5T3Y7 98 aa13.5□□□□□ -0.25
R3HDM4-204ENST00000589428 Q8NDZ9 215 aa13.5□□□□□ -0.25
R3HDM4-204ENST00000589428 A4D1N5 150 aa13.49□□□□□ -0.25
R3HDM4-204ENST00000589428 RPL24P83731 157 aaKnown RBP13.49□□□□□ -0.25
R3HDM4-204ENST00000589428 SMR3BP02814 79 aaPredicted RBP13.48□□□□□ -0.25
R3HDM4-204ENST00000589428 Q8N1X5 172 aa13.48□□□□□ -0.25
R3HDM4-204ENST00000589428 A0A087WYN8 130 aa13.45□□□□□ -0.26
R3HDM4-204ENST00000589428 FAM168BA1KXE4 195 aa13.44□□□□□ -0.26
R3HDM4-204ENST00000589428 TMEM238LA0A1B0GVL6 79 aa13.44□□□□□ -0.26
R3HDM4-204ENST00000589428 A6NJY4 79 aa13.44□□□□□ -0.26
R3HDM4-204ENST00000589428 BATFQ16520 125 aa13.44□□□□□ -0.26
R3HDM4-204ENST00000589428 LBHQ53QV2 105 aaPredicted RBP13.44□□□□□ -0.26
R3HDM4-204ENST00000589428 FAT1Q14517 4588 aa13.43□□□□□ -0.26
R3HDM4-204ENST00000589428 SERTAD4-AS1Q5TG53 156 aa13.43□□□□□ -0.26
R3HDM4-204ENST00000589428 NDUFC2O95298 119 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 VPREB1P12018 145 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 PRR3P79522 188 aaKnown RBP13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 LINC00528Q8N1L1 170 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 PLAC8Q9NZF1 115 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 IGKV2-28A0A075B6P5 120 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 EPM2AB3EWF7 344 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 FAM229AH3BQW9 127 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 IGKV2D-28P01615 120 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 KRTAP7-1Q8IUC3 87 aa13.42□□□□□ -0.26
R3HDM4-204ENST00000589428 Q5VSD8 79 aa13.41□□□□□ -0.26
R3HDM4-204ENST00000589428 NHP2Q9NX24 153 aaKnown RBP13.41□□□□□ -0.26
R3HDM4-204ENST00000589428 PLA2G2DQ9UNK4 145 aa13.41□□□□□ -0.26
R3HDM4-204ENST00000589428 CFC1BP0CG36 223 aa13.4□□□□□ -0.26
R3HDM4-204ENST00000589428 CFC1P0CG37 223 aa13.4□□□□□ -0.26
R3HDM4-204ENST00000589428 KRTAP17-1Q9BYP8 105 aa13.4□□□□□ -0.26
R3HDM4-204ENST00000589428 NCR3O14931 201 aa13.39□□□□□ -0.27
R3HDM4-204ENST00000589428 K7ERJ3 54 aa13.39□□□□□ -0.27
R3HDM4-204ENST00000589428 FAM19A5Q7Z5A7 132 aaPredicted RBP13.39□□□□□ -0.27
R3HDM4-204ENST00000589428 A0A1B0GWB2 263 aa13.38□□□□□ -0.27
R3HDM4-204ENST00000589428 A0A1W2PNN7 141 aa13.38□□□□□ -0.27
R3HDM4-204ENST00000589428 LINC00337Q8N6G1 96 aa13.37□□□□□ -0.27
R3HDM4-204ENST00000589428 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
R3HDM4-204ENST00000589428 IGLV5-37A0A075B6J1 123 aa13.36□□□□□ -0.27
R3HDM4-204ENST00000589428 A6NDN8 102 aa13.36□□□□□ -0.27
R3HDM4-204ENST00000589428 TRBV10-2A0A0K0K1G8 114 aa13.34□□□□□ -0.27
R3HDM4-204ENST00000589428 PLA2G1BP04054 148 aaKnown RBP13.34□□□□□ -0.27
R3HDM4-204ENST00000589428 NKAPP1Q8N9T2 125 aa13.34□□□□□ -0.27
R3HDM4-204ENST00000589428 C7orf33Q8WU49 177 aa13.33□□□□□ -0.27
R3HDM4-204ENST00000589428 RAB37Q96AX2 223 aa13.33□□□□□ -0.27
R3HDM4-204ENST00000589428 COL5A1-AS1Q5SY13 56 aa13.33□□□□□ -0.28
R3HDM4-204ENST00000589428 KRTAP4-5Q9BYR2 181 aa13.33□□□□□ -0.28
R3HDM4-204ENST00000589428 C22orf24Q9Y442 160 aa13.32□□□□□ -0.28
R3HDM4-204ENST00000589428 TRAV13-2A0A0B4J235 113 aa13.31□□□□□ -0.28
R3HDM4-204ENST00000589428 M0QXV9 152 aa13.31□□□□□ -0.28
R3HDM4-204ENST00000589428 M0R378 163 aa13.31□□□□□ -0.28
R3HDM4-204ENST00000589428 PRO1854Q9UHT4 67 aa13.3□□□□□ -0.28
R3HDM4-204ENST00000589428 GAGE10A6NGK3 116 aa13.3□□□□□ -0.28
R3HDM4-204ENST00000589428 RPL13AP40429 203 aaKnown RBP13.3□□□□□ -0.28
R3HDM4-204ENST00000589428 RPL37AP61513 92 aaKnown RBP13.3□□□□□ -0.28
R3HDM4-204ENST00000589428 MRPL55Q7Z7F7 128 aaKnown RBP13.29□□□□□ -0.28
R3HDM4-204ENST00000589428 OR13C6PQ8NH95 151 aa13.29□□□□□ -0.28
R3HDM4-204ENST00000589428 IGLV6-57P01721 117 aa13.28□□□□□ -0.28
R3HDM4-204ENST00000589428 VPS13BQ7Z7G8 4022 aa13.28□□□□□ -0.28
R3HDM4-204ENST00000589428 TRBV10-3A0A0K0K1G6 114 aa13.27□□□□□ -0.28
R3HDM4-204ENST00000589428 S100A7L2Q5SY68 101 aa13.27□□□□□ -0.28
R3HDM4-204ENST00000589428 A0A1B0GV90 55 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms