RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 UBR4Q5T4S7 5183 aa12.46□□□□□ -0.42
MBD3-205ENST00000589064 SND1-IT1Q9HBX3 110 aa12.46□□□□□ -0.42
MBD3-205ENST00000589064 TMEM223A0PJW6 202 aa12.45□□□□□ -0.42
MBD3-205ENST00000589064 BCE1O60756 84 aa12.45□□□□□ -0.42
MBD3-205ENST00000589064 COX17Q14061 63 aa12.45□□□□□ -0.42
MBD3-205ENST00000589064 HSPB8Q9UJY1 196 aa12.45□□□□□ -0.42
MBD3-205ENST00000589064 IGLV1-50A0A075B6I6 118 aa12.43□□□□□ -0.42
MBD3-205ENST00000589064 SFTA2Q6UW10 78 aa12.43□□□□□ -0.42
MBD3-205ENST00000589064 RPL28P46779 137 aaKnown RBP12.42□□□□□ -0.42
MBD3-205ENST00000589064 H0Y8G0 127 aa12.41□□□□□ -0.42
MBD3-205ENST00000589064 VPREB1P12018 145 aa12.4□□□□□ -0.42
MBD3-205ENST00000589064 LINC00158P58513 81 aa12.4□□□□□ -0.42
MBD3-205ENST00000589064 IGKV2-28A0A075B6P5 120 aa12.4□□□□□ -0.43
MBD3-205ENST00000589064 IGKV2D-28P01615 120 aa12.4□□□□□ -0.43
MBD3-205ENST00000589064 A0A0U1RRA0 63 aa12.39□□□□□ -0.43
MBD3-205ENST00000589064 RPL24P83731 157 aaKnown RBP12.39□□□□□ -0.43
MBD3-205ENST00000589064 Q8NDZ9 215 aa12.38□□□□□ -0.43
MBD3-205ENST00000589064 MAP1LC3CQ9BXW4 147 aa12.38□□□□□ -0.43
MBD3-205ENST00000589064 S100A6P06703 90 aa12.37□□□□□ -0.43
MBD3-205ENST00000589064 UBE2AP49459 152 aa12.35□□□□□ -0.43
MBD3-205ENST00000589064 RPL13AP40429 203 aaKnown RBP12.34□□□□□ -0.43
MBD3-205ENST00000589064 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
MBD3-205ENST00000589064 KRTAP13-1Q8IUC0 172 aa12.34□□□□□ -0.43
MBD3-205ENST00000589064 HIST3H2BBQ8N257 126 aa12.34□□□□□ -0.43
MBD3-205ENST00000589064 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
MBD3-205ENST00000589064 LRP2P98164 4655 aa12.32□□□□□ -0.44
MBD3-205ENST00000589064 SYS1-DBNDD2H3BUS1 97 aa12.32□□□□□ -0.44
MBD3-205ENST00000589064 MEIG1Q5JSS6 88 aa12.32□□□□□ -0.44
MBD3-205ENST00000589064 NDUFA12Q9UI09 145 aa12.32□□□□□ -0.44
MBD3-205ENST00000589064 HERV-K104P63124 156 aa12.31□□□□□ -0.44
MBD3-205ENST00000589064 PMCHL2Q9BQD1 86 aa12.31□□□□□ -0.44
MBD3-205ENST00000589064 TMEM126AQ9H061 195 aa12.31□□□□□ -0.44
MBD3-205ENST00000589064 C3orf79P0CE67 100 aa12.3□□□□□ -0.44
MBD3-205ENST00000589064 S100A2P29034 98 aa12.3□□□□□ -0.44
MBD3-205ENST00000589064 SNRPEP62304 92 aaKnown RBP12.3□□□□□ -0.44
MBD3-205ENST00000589064 ANAPC11Q9NYG5 84 aa12.3□□□□□ -0.44
MBD3-205ENST00000589064 M0R378 163 aa12.29□□□□□ -0.44
MBD3-205ENST00000589064 PRLHP81277 87 aa12.29□□□□□ -0.44
MBD3-205ENST00000589064 FAM19A1Q7Z5A9 133 aa12.29□□□□□ -0.44
MBD3-205ENST00000589064 A0A087X002 238 aa12.28□□□□□ -0.44
MBD3-205ENST00000589064 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
MBD3-205ENST00000589064 PLNP26678 52 aa12.28□□□□□ -0.44
MBD3-205ENST00000589064 KRTDAPP60985 99 aa12.28□□□□□ -0.44
MBD3-205ENST00000589064 MIR7-3HGQ8N6C7 128 aa12.28□□□□□ -0.44
MBD3-205ENST00000589064 LEPROTO15243 131 aa12.27□□□□□ -0.44
MBD3-205ENST00000589064 DPM2O94777 84 aa12.27□□□□□ -0.44
MBD3-205ENST00000589064 TSPEAR-AS2P59090 65 aa12.27□□□□□ -0.44
MBD3-205ENST00000589064 PET117Q6UWS5 81 aa12.27□□□□□ -0.44
MBD3-205ENST00000589064 HIST1H2BLQ99880 126 aa12.27□□□□□ -0.44
MBD3-205ENST00000589064 C5orf52A6NGY3 159 aa12.27□□□□□ -0.45
MBD3-205ENST00000589064 CRYGAP11844 174 aa12.27□□□□□ -0.45
MBD3-205ENST00000589064 BOD1L2Q8IYS8 172 aa12.27□□□□□ -0.45
MBD3-205ENST00000589064 LINC00587B1AMM8 73 aa12.26□□□□□ -0.45
MBD3-205ENST00000589064 IGKCP01834 107 aa12.26□□□□□ -0.45
MBD3-205ENST00000589064 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
MBD3-205ENST00000589064 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
MBD3-205ENST00000589064 TYMSOSQ8TAI1 123 aa12.23□□□□□ -0.45
MBD3-205ENST00000589064 J3QQQ9 107 aa12.22□□□□□ -0.45
MBD3-205ENST00000589064 HERVK_113P61574 105 aa12.22□□□□□ -0.45
MBD3-205ENST00000589064 NCR3O14931 201 aa12.21□□□□□ -0.45
MBD3-205ENST00000589064 TMA7Q9Y2S6 64 aaKnown RBP12.21□□□□□ -0.45
MBD3-205ENST00000589064 TSPAN13O95857 204 aa12.21□□□□□ -0.46
MBD3-205ENST00000589064 KRTAP13-2Q52LG2 175 aa12.2□□□□□ -0.46
MBD3-205ENST00000589064 DAND5Q8N907 189 aa12.2□□□□□ -0.46
MBD3-205ENST00000589064 C20orf202A1L168 122 aa12.19□□□□□ -0.46
MBD3-205ENST00000589064 LGALS3P17931 250 aaKnown RBP12.18□□□□□ -0.46
MBD3-205ENST00000589064 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
MBD3-205ENST00000589064 HIGD2AQ9BW72 106 aa12.17□□□□□ -0.46
MBD3-205ENST00000589064 IGKV2D-26A0A0A0MRZ7 120 aa12.16□□□□□ -0.46
MBD3-205ENST00000589064 NMUP48645 174 aa12.16□□□□□ -0.46
MBD3-205ENST00000589064 PRR4Q16378 134 aa12.16□□□□□ -0.46
MBD3-205ENST00000589064 LOC107984156A0A0G2JMH3 177 aa12.14□□□□□ -0.47
MBD3-205ENST00000589064 TRBV10-3A0A0K0K1G6 114 aa12.14□□□□□ -0.47
MBD3-205ENST00000589064 PRYO14603 147 aa12.14□□□□□ -0.47
MBD3-205ENST00000589064 ARL17AQ8IVW1 177 aa12.14□□□□□ -0.47
MBD3-205ENST00000589064 KCNQ1DNQ9H478 68 aa12.14□□□□□ -0.47
MBD3-205ENST00000589064 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
MBD3-205ENST00000589064 LPAP08519 4548 aa12.12□□□□□ -0.47
MBD3-205ENST00000589064 E9PLD3 99 aa12.12□□□□□ -0.47
MBD3-205ENST00000589064 SPRR1AP35321 89 aa12.12□□□□□ -0.47
MBD3-205ENST00000589064 RNF213Q63HN8 5207 aa12.12□□□□□ -0.47
MBD3-205ENST00000589064 AKR1D1P51857 326 aa12.1□□□□□ -0.47
MBD3-205ENST00000589064 LINC00337Q8N6G1 96 aa12.1□□□□□ -0.47
MBD3-205ENST00000589064 A0A0J9YXY3 114 aa12.09□□□□□ -0.47
MBD3-205ENST00000589064 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
MBD3-205ENST00000589064 MIEN1Q9BRT3 115 aa12.09□□□□□ -0.47
MBD3-205ENST00000589064 ETDCA0A1B0GVM5 59 aa12.08□□□□□ -0.47
MBD3-205ENST00000589064 KRTAP4-16G5E9R7 235 aaPredicted RBP12.08□□□□□ -0.47
MBD3-205ENST00000589064 SPRR4Q96PI1 79 aa12.08□□□□□ -0.47
MBD3-205ENST00000589064 TRBV10-2A0A0K0K1G8 114 aa12.08□□□□□ -0.48
MBD3-205ENST00000589064 DDTP30046 118 aa12.08□□□□□ -0.48
MBD3-205ENST00000589064 NPC2P61916 151 aa12.08□□□□□ -0.48
MBD3-205ENST00000589064 C3orf22Q8N5N4 141 aa12.08□□□□□ -0.48
MBD3-205ENST00000589064 LINC00304Q8N9R0 145 aa12.08□□□□□ -0.48
MBD3-205ENST00000589064 SMCR5Q8TEV8 140 aa12.08□□□□□ -0.48
MBD3-205ENST00000589064 SCGB1D1O95968 90 aa12.07□□□□□ -0.48
MBD3-205ENST00000589064 S100A12P80511 92 aa12.07□□□□□ -0.48
MBD3-205ENST00000589064 EIF4EBP3O60516 100 aaPredicted RBP12.06□□□□□ -0.48
MBD3-205ENST00000589064 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
MBD3-205ENST00000589064 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms