RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 RYR2Q92736 4967 aa9.32□□□□□ -0.92
NPC1-207ENST00000588867 DNAH17Q9UFH2 4485 aa9.32□□□□□ -0.92
NPC1-207ENST00000588867 IGKV2-24A0A0C4DH68 120 aa9.32□□□□□ -0.92
NPC1-207ENST00000588867 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
NPC1-207ENST00000588867 A0A096LNI7 61 aa9.31□□□□□ -0.92
NPC1-207ENST00000588867 BATFQ16520 125 aa9.31□□□□□ -0.92
NPC1-207ENST00000588867 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
NPC1-207ENST00000588867 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
NPC1-207ENST00000588867 FXYD2P54710 66 aa9.31□□□□□ -0.92
NPC1-207ENST00000588867 BVES-AS1Q5T3Y7 98 aa9.31□□□□□ -0.92
NPC1-207ENST00000588867 A4D1N5 150 aa9.3□□□□□ -0.92
NPC1-207ENST00000588867 C9orf129Q5T035 196 aaKnown RBP9.3□□□□□ -0.92
NPC1-207ENST00000588867 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
NPC1-207ENST00000588867 C16orf90A8MZG2 172 aa9.29□□□□□ -0.92
NPC1-207ENST00000588867 CHTF8P0CG12 524 aa9.29□□□□□ -0.92
NPC1-207ENST00000588867 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
NPC1-207ENST00000588867 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
NPC1-207ENST00000588867 DPH3Q96FX2 82 aa9.28□□□□□ -0.92
NPC1-207ENST00000588867 TMEM238LA0A1B0GVL6 79 aa9.27□□□□□ -0.92
NPC1-207ENST00000588867 A6NJY4 79 aa9.27□□□□□ -0.92
NPC1-207ENST00000588867 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.92
NPC1-207ENST00000588867 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
NPC1-207ENST00000588867 Q8NDZ9 215 aa9.26□□□□□ -0.93
NPC1-207ENST00000588867 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
NPC1-207ENST00000588867 NHP2Q9NX24 153 aaKnown RBP9.26□□□□□ -0.93
NPC1-207ENST00000588867 NCR3O14931 201 aa9.24□□□□□ -0.93
NPC1-207ENST00000588867 CFC1BP0CG36 223 aa9.24□□□□□ -0.93
NPC1-207ENST00000588867 CFC1P0CG37 223 aa9.24□□□□□ -0.93
NPC1-207ENST00000588867 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
NPC1-207ENST00000588867 PANO1I0J062 215 aa9.24□□□□□ -0.93
NPC1-207ENST00000588867 NDUFC2O95298 119 aa9.24□□□□□ -0.93
NPC1-207ENST00000588867 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
NPC1-207ENST00000588867 FAM19A5Q7Z5A7 132 aaPredicted RBP9.24□□□□□ -0.93
NPC1-207ENST00000588867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
NPC1-207ENST00000588867 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
NPC1-207ENST00000588867 A0A1B0GVY2 172 aa9.23□□□□□ -0.93
NPC1-207ENST00000588867 A6NDN8 102 aa9.23□□□□□ -0.93
NPC1-207ENST00000588867 VPREB1P12018 145 aa9.23□□□□□ -0.93
NPC1-207ENST00000588867 RAB37Q96AX2 223 aa9.23□□□□□ -0.93
NPC1-207ENST00000588867 IGKV2-28A0A075B6P5 120 aa9.22□□□□□ -0.93
NPC1-207ENST00000588867 K7ERJ3 54 aa9.22□□□□□ -0.93
NPC1-207ENST00000588867 IGKV2D-28P01615 120 aa9.22□□□□□ -0.93
NPC1-207ENST00000588867 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
NPC1-207ENST00000588867 A0A1W2PNN7 141 aa9.22□□□□□ -0.93
NPC1-207ENST00000588867 NKAPP1Q8N9T2 125 aa9.22□□□□□ -0.93
NPC1-207ENST00000588867 KRTAP10-1P60331 282 aa9.21□□□□□ -0.93
NPC1-207ENST00000588867 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.93
NPC1-207ENST00000588867 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.93
NPC1-207ENST00000588867 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
NPC1-207ENST00000588867 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
NPC1-207ENST00000588867 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
NPC1-207ENST00000588867 LINC00337Q8N6G1 96 aa9.2□□□□□ -0.94
NPC1-207ENST00000588867 RYR3Q15413 4870 aa9.2□□□□□ -0.94
NPC1-207ENST00000588867 A0A0B4J2C4 111 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 C22orf24Q9Y442 160 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 TRAV13-2A0A0B4J235 113 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 GAGE10A6NGK3 116 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 H7C2G1 150 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 S100A7L2Q5SY68 101 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 PRO1854Q9UHT4 67 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 PKD1P98161 4303 aa9.19□□□□□ -0.94
NPC1-207ENST00000588867 DNAH11Q96DT5 4516 aa9.18□□□□□ -0.94
NPC1-207ENST00000588867 A0A087WYN8 130 aa9.18□□□□□ -0.94
NPC1-207ENST00000588867 A0A1B0GWB2 263 aa9.18□□□□□ -0.94
NPC1-207ENST00000588867 M0R378 163 aa9.18□□□□□ -0.94
NPC1-207ENST00000588867 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
NPC1-207ENST00000588867 TRBV10-2A0A0K0K1G8 114 aa9.17□□□□□ -0.94
NPC1-207ENST00000588867 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
NPC1-207ENST00000588867 M0QXV9 152 aa9.17□□□□□ -0.94
NPC1-207ENST00000588867 RPL13AP40429 203 aaKnown RBP9.17□□□□□ -0.94
NPC1-207ENST00000588867 MRPL55Q7Z7F7 128 aaKnown RBP9.16□□□□□ -0.94
NPC1-207ENST00000588867 C7orf33Q8WU49 177 aa9.16□□□□□ -0.94
NPC1-207ENST00000588867 TMEM126AQ9H061 195 aa9.15□□□□□ -0.94
NPC1-207ENST00000588867 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
NPC1-207ENST00000588867 Q1RN00 199 aa9.15□□□□□ -0.94
NPC1-207ENST00000588867 LINC00167Q96N53 147 aa9.15□□□□□ -0.94
NPC1-207ENST00000588867 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
NPC1-207ENST00000588867 PHF5AQ7RTV0 110 aaKnown RBP9.14□□□□□ -0.95
NPC1-207ENST00000588867 IGLV6-57P01721 117 aa9.12□□□□□ -0.95
NPC1-207ENST00000588867 Q6ZSA8 131 aa9.12□□□□□ -0.95
NPC1-207ENST00000588867 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
NPC1-207ENST00000588867 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
NPC1-207ENST00000588867 HAMPP81172 84 aa9.12□□□□□ -0.95
NPC1-207ENST00000588867 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
NPC1-207ENST00000588867 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
NPC1-207ENST00000588867 TSPAN13O95857 204 aa9.11□□□□□ -0.95
NPC1-207ENST00000588867 NAA38Q9BRA0 125 aaKnown RBP9.11□□□□□ -0.95
NPC1-207ENST00000588867 UBE2BP63146 152 aa9.1□□□□□ -0.95
NPC1-207ENST00000588867 SCXQ7RTU7 201 aa9.1□□□□□ -0.95
NPC1-207ENST00000588867 SMIM11BQ8TCY0 68 aa9.1□□□□□ -0.95
NPC1-207ENST00000588867 IGLV1-50A0A075B6I6 118 aa9.1□□□□□ -0.95
NPC1-207ENST00000588867 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
NPC1-207ENST00000588867 PSMB2P49721 201 aa9.1□□□□□ -0.95
NPC1-207ENST00000588867 TRAV23DV6A0A075B6W5 121 aa9.09□□□□□ -0.95
NPC1-207ENST00000588867 H3BUT2 72 aa9.08□□□□□ -0.96
NPC1-207ENST00000588867 VAMP3Q15836 100 aa9.07□□□□□ -0.96
NPC1-207ENST00000588867 C9orf118A6NHY6 69 aa9.07□□□□□ -0.96
NPC1-207ENST00000588867 KCNQ1DNQ9H478 68 aa9.07□□□□□ -0.96
NPC1-207ENST00000588867 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
NPC1-207ENST00000588867 C6orf99Q4VX62 202 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms