RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
APOC1-203ENST00000588802 UNQ6190/PRO20217Q6UXQ8 127 aa6.74□□□□□ -1.33
APOC1-203ENST00000588802 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
APOC1-203ENST00000588802 RMI2Q96E14 147 aa6.74□□□□□ -1.33
APOC1-203ENST00000588802 CFC1BP0CG36 223 aa6.73□□□□□ -1.33
APOC1-203ENST00000588802 CFC1P0CG37 223 aa6.73□□□□□ -1.33
APOC1-203ENST00000588802 INAFM2P0DMQ5 153 aa6.73□□□□□ -1.33
APOC1-203ENST00000588802 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
APOC1-203ENST00000588802 NTN5Q8WTR8 489 aaPredicted RBP6.73□□□□□ -1.33
APOC1-203ENST00000588802 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
APOC1-203ENST00000588802 H3BUT2 72 aa6.72□□□□□ -1.33
APOC1-203ENST00000588802 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
APOC1-203ENST00000588802 IGLV5-52A0A0A0MRZ9 124 aa6.71□□□□□ -1.34
APOC1-203ENST00000588802 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
APOC1-203ENST00000588802 A0A0B4J2C4 111 aa6.71□□□□□ -1.34
APOC1-203ENST00000588802 USP17L23D6RBM5 183 aa6.71□□□□□ -1.34
APOC1-203ENST00000588802 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.34
APOC1-203ENST00000588802 Q5VSD8 79 aa6.71□□□□□ -1.34
APOC1-203ENST00000588802 Q6ZRU5 148 aa6.71□□□□□ -1.34
APOC1-203ENST00000588802 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
APOC1-203ENST00000588802 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
APOC1-203ENST00000588802 LECT2O14960 151 aa6.7□□□□□ -1.34
APOC1-203ENST00000588802 TSPAN13O95857 204 aa6.7□□□□□ -1.34
APOC1-203ENST00000588802 LRCOL1A6NCL2 159 aa6.69□□□□□ -1.34
APOC1-203ENST00000588802 WFDC2Q14508 124 aa6.69□□□□□ -1.34
APOC1-203ENST00000588802 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
APOC1-203ENST00000588802 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
APOC1-203ENST00000588802 H7C2G1 150 aa6.68□□□□□ -1.34
APOC1-203ENST00000588802 RPL13AP40429 203 aaKnown RBP6.68□□□□□ -1.34
APOC1-203ENST00000588802 VAMP3Q15836 100 aa6.68□□□□□ -1.34
APOC1-203ENST00000588802 C2orf48Q96LS8 159 aa6.68□□□□□ -1.34
APOC1-203ENST00000588802 PRO1854Q9UHT4 67 aa6.68□□□□□ -1.34
APOC1-203ENST00000588802 TRBV30A0A0K0K1B3 111 aa6.67□□□□□ -1.34
APOC1-203ENST00000588802 Q1RN00 199 aa6.67□□□□□ -1.34
APOC1-203ENST00000588802 Q8N814 137 aa6.67□□□□□ -1.34
APOC1-203ENST00000588802 PPDPFQ9H3Y8 114 aa6.67□□□□□ -1.34
APOC1-203ENST00000588802 SND1-IT1Q9HBX3 110 aa6.67□□□□□ -1.34
APOC1-203ENST00000588802 FAM30AQ9NZY2 134 aa6.67□□□□□ -1.34
APOC1-203ENST00000588802 FAT1Q14517 4588 aa6.66□□□□□ -1.34
APOC1-203ENST00000588802 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.66□□□□□ -1.34
APOC1-203ENST00000588802 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
APOC1-203ENST00000588802 SYCNQ0VAF6 134 aa6.66□□□□□ -1.34
APOC1-203ENST00000588802 COX17Q14061 63 aa6.66□□□□□ -1.34
APOC1-203ENST00000588802 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
APOC1-203ENST00000588802 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
APOC1-203ENST00000588802 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
APOC1-203ENST00000588802 FABP2P12104 132 aa6.65□□□□□ -1.34
APOC1-203ENST00000588802 Q8NDZ9 215 aa6.65□□□□□ -1.34
APOC1-203ENST00000588802 F8WDY8 70 aa6.64□□□□□ -1.35
APOC1-203ENST00000588802 K7EP34 96 aa6.64□□□□□ -1.35
APOC1-203ENST00000588802 NCR3O14931 201 aa6.64□□□□□ -1.35
APOC1-203ENST00000588802 SLPIP03973 132 aa6.64□□□□□ -1.35
APOC1-203ENST00000588802 LINC01620Q4KN68 170 aa6.64□□□□□ -1.35
APOC1-203ENST00000588802 LINC00337Q8N6G1 96 aa6.64□□□□□ -1.35
APOC1-203ENST00000588802 SPCS1Q9Y6A9 102 aa6.64□□□□□ -1.35
APOC1-203ENST00000588802 LOC107984156A0A0G2JMH3 177 aa6.63□□□□□ -1.35
APOC1-203ENST00000588802 PSMB2P49721 201 aa6.63□□□□□ -1.35
APOC1-203ENST00000588802 ARL17AQ8IVW1 177 aa6.63□□□□□ -1.35
APOC1-203ENST00000588802 XAGE1AQ9HD64 81 aa6.63□□□□□ -1.35
APOC1-203ENST00000588802 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
APOC1-203ENST00000588802 TRIAP1O43715 76 aa6.62□□□□□ -1.35
APOC1-203ENST00000588802 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
APOC1-203ENST00000588802 TRAV13-2A0A0B4J235 113 aa6.61□□□□□ -1.35
APOC1-203ENST00000588802 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
APOC1-203ENST00000588802 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
APOC1-203ENST00000588802 PRR3P79522 188 aaKnown RBP6.61□□□□□ -1.35
APOC1-203ENST00000588802 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
APOC1-203ENST00000588802 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
APOC1-203ENST00000588802 NDUFC2O95298 119 aa6.6□□□□□ -1.35
APOC1-203ENST00000588802 UBE2V1Q13404 147 aa6.6□□□□□ -1.35
APOC1-203ENST00000588802 RNF151Q2KHN1 245 aa6.6□□□□□ -1.35
APOC1-203ENST00000588802 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
APOC1-203ENST00000588802 Q6ZRP5 223 aa6.6□□□□□ -1.35
APOC1-203ENST00000588802 Q6ZSA8 131 aa6.6□□□□□ -1.35
APOC1-203ENST00000588802 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
APOC1-203ENST00000588802 FLG2Q5D862 2391 aaPredicted RBP6.59□□□□□ -1.35
APOC1-203ENST00000588802 TCL1BO95988 128 aa6.59□□□□□ -1.35
APOC1-203ENST00000588802 PLA2G1BP04054 148 aaKnown RBP6.59□□□□□ -1.35
APOC1-203ENST00000588802 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.35
APOC1-203ENST00000588802 C14orf177Q52M58 125 aa6.59□□□□□ -1.35
APOC1-203ENST00000588802 OR13C6PQ8NH95 151 aa6.59□□□□□ -1.35
APOC1-203ENST00000588802 J3QL48 77 aa6.58□□□□□ -1.36
APOC1-203ENST00000588802 TLX1NBP0CAT3 122 aa6.58□□□□□ -1.36
APOC1-203ENST00000588802 VPREB1P12018 145 aa6.58□□□□□ -1.36
APOC1-203ENST00000588802 C9orf129Q5T035 196 aaKnown RBP6.58□□□□□ -1.36
APOC1-203ENST00000588802 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
APOC1-203ENST00000588802 HERC1Q15751 4861 aa6.58□□□□□ -1.36
APOC1-203ENST00000588802 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
APOC1-203ENST00000588802 CNBPP62633 177 aaKnown RBP6.57□□□□□ -1.36
APOC1-203ENST00000588802 MTURNQ8N3F0 131 aa6.57□□□□□ -1.36
APOC1-203ENST00000588802 CLEC2BQ92478 149 aa6.57□□□□□ -1.36
APOC1-203ENST00000588802 VPS13BQ7Z7G8 4022 aa6.56□□□□□ -1.36
APOC1-203ENST00000588802 H3BMG7 143 aa6.56□□□□□ -1.36
APOC1-203ENST00000588802 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
APOC1-203ENST00000588802 SCXQ7RTU7 201 aa6.56□□□□□ -1.36
APOC1-203ENST00000588802 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
APOC1-203ENST00000588802 SERTAD4-AS1Q5TG53 156 aa6.55□□□□□ -1.36
APOC1-203ENST00000588802 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
APOC1-203ENST00000588802 A0A096LNI7 61 aa6.54□□□□□ -1.36
APOC1-203ENST00000588802 TRBV10-2A0A0K0K1G8 114 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms