RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ERG28Q9UKR5 140 aa14.11□□□□□ -0.15
LSM7-204ENST00000587502 ZNF861PO60384 105 aa14.1□□□□□ -0.15
LSM7-204ENST00000587502 PFN2P35080 140 aa14.1□□□□□ -0.15
LSM7-204ENST00000587502 IGLV1-50A0A075B6I6 118 aa14.09□□□□□ -0.15
LSM7-204ENST00000587502 COX17Q14061 63 aa14.09□□□□□ -0.15
LSM7-204ENST00000587502 PET117Q6UWS5 81 aa14.08□□□□□ -0.16
LSM7-204ENST00000587502 IGLV5-37A0A075B6J1 123 aa14.07□□□□□ -0.16
LSM7-204ENST00000587502 C3orf79P0CE67 100 aa14.07□□□□□ -0.16
LSM7-204ENST00000587502 LINC01545Q5VT33 79 aa14.07□□□□□ -0.16
LSM7-204ENST00000587502 PRR26Q8N8Z3 221 aa14.07□□□□□ -0.16
LSM7-204ENST00000587502 LEPROTO15243 131 aa14.06□□□□□ -0.16
LSM7-204ENST00000587502 NKAPP1Q8N9T2 125 aa14.06□□□□□ -0.16
LSM7-204ENST00000587502 LINC00167Q96N53 147 aa14.06□□□□□ -0.16
LSM7-204ENST00000587502 TSPEAR-AS2P59090 65 aa14.05□□□□□ -0.16
LSM7-204ENST00000587502 BCE1O60756 84 aa14.04□□□□□ -0.16
LSM7-204ENST00000587502 KRTAP1-4P0C5Y4 121 aa14.04□□□□□ -0.16
LSM7-204ENST00000587502 RPL28P46779 137 aaKnown RBP14.04□□□□□ -0.16
LSM7-204ENST00000587502 HERVK_113P61574 105 aa14.04□□□□□ -0.16
LSM7-204ENST00000587502 PLEKHB2Q96CS7 222 aa14.04□□□□□ -0.16
LSM7-204ENST00000587502 NDUFA12Q9UI09 145 aa14.04□□□□□ -0.16
LSM7-204ENST00000587502 RPL13AP40429 203 aaKnown RBP14.03□□□□□ -0.16
LSM7-204ENST00000587502 SND1-IT1Q9HBX3 110 aa14.03□□□□□ -0.16
LSM7-204ENST00000587502 HERV-K104P63124 156 aa14.02□□□□□ -0.17
LSM7-204ENST00000587502 MYMXA0A1B0GTQ4 84 aa14.01□□□□□ -0.17
LSM7-204ENST00000587502 RPL37AP8A6NKH3 93 aa14.01□□□□□ -0.17
LSM7-204ENST00000587502 J3QQQ9 107 aa14.01□□□□□ -0.17
LSM7-204ENST00000587502 LINC00158P58513 81 aa14.01□□□□□ -0.17
LSM7-204ENST00000587502 KRTDAPP60985 99 aa14.01□□□□□ -0.17
LSM7-204ENST00000587502 S100A6P06703 90 aa14□□□□□ -0.17
LSM7-204ENST00000587502 LRP2P98164 4655 aa13.99□□□□□ -0.17
LSM7-204ENST00000587502 GAGE10A6NGK3 116 aa13.99□□□□□ -0.17
LSM7-204ENST00000587502 E9PLD3 99 aa13.99□□□□□ -0.17
LSM7-204ENST00000587502 RPL24P83731 157 aaKnown RBP13.99□□□□□ -0.17
LSM7-204ENST00000587502 HIST3H2BBQ8N257 126 aa13.99□□□□□ -0.17
LSM7-204ENST00000587502 A0A0U1RRA0 63 aa13.98□□□□□ -0.17
LSM7-204ENST00000587502 SMIM13P0DJ93 91 aa13.98□□□□□ -0.17
LSM7-204ENST00000587502 MEIG1Q5JSS6 88 aa13.97□□□□□ -0.17
LSM7-204ENST00000587502 LGALS3P17931 250 aaKnown RBP13.96□□□□□ -0.17
LSM7-204ENST00000587502 NMUP48645 174 aa13.96□□□□□ -0.17
LSM7-204ENST00000587502 LINC00587B1AMM8 73 aa13.95□□□□□ -0.18
LSM7-204ENST00000587502 S100A2P29034 98 aa13.95□□□□□ -0.18
LSM7-204ENST00000587502 VPREB1P12018 145 aa13.94□□□□□ -0.18
LSM7-204ENST00000587502 HIST1H2BLQ99880 126 aa13.94□□□□□ -0.18
LSM7-204ENST00000587502 MIR7-3HGQ8N6C7 128 aa13.93□□□□□ -0.18
LSM7-204ENST00000587502 Q8NDZ9 215 aa13.93□□□□□ -0.18
LSM7-204ENST00000587502 UBE2AP49459 152 aa13.92□□□□□ -0.18
LSM7-204ENST00000587502 IGKV2-28A0A075B6P5 120 aa13.91□□□□□ -0.18
LSM7-204ENST00000587502 C20orf202A1L168 122 aa13.91□□□□□ -0.18
LSM7-204ENST00000587502 IGKV2D-28P01615 120 aa13.91□□□□□ -0.18
LSM7-204ENST00000587502 SNRPEP62304 92 aaKnown RBP13.9□□□□□ -0.18
LSM7-204ENST00000587502 IGKV2D-26A0A0A0MRZ7 120 aa13.88□□□□□ -0.19
LSM7-204ENST00000587502 KRTAP13-1Q8IUC0 172 aa13.88□□□□□ -0.19
LSM7-204ENST00000587502 A0A0J9YXY3 114 aa13.87□□□□□ -0.19
LSM7-204ENST00000587502 C5orf52A6NGY3 159 aa13.87□□□□□ -0.19
LSM7-204ENST00000587502 CRYGAP11844 174 aa13.87□□□□□ -0.19
LSM7-204ENST00000587502 DAND5Q8N907 189 aa13.86□□□□□ -0.19
LSM7-204ENST00000587502 AKR1D1P51857 326 aa13.85□□□□□ -0.19
LSM7-204ENST00000587502 ATOH7Q8N100 152 aa13.85□□□□□ -0.19
LSM7-204ENST00000587502 LOC107984156A0A0G2JMH3 177 aa13.84□□□□□ -0.19
LSM7-204ENST00000587502 ARL17AQ8IVW1 177 aa13.84□□□□□ -0.19
LSM7-204ENST00000587502 BOD1L2Q8IYS8 172 aa13.84□□□□□ -0.19
LSM7-204ENST00000587502 TMEM126AQ9H061 195 aa13.84□□□□□ -0.19
LSM7-204ENST00000587502 TTTY13Q9BZ97 58 aa13.83□□□□□ -0.2
LSM7-204ENST00000587502 ANKRD39Q53RE8 183 aa13.82□□□□□ -0.2
LSM7-204ENST00000587502 FAM19A1Q7Z5A9 133 aa13.82□□□□□ -0.2
LSM7-204ENST00000587502 ADAMTSL4-AS1Q5T5F5 129 aa13.81□□□□□ -0.2
LSM7-204ENST00000587502 A0A087X002 238 aa13.8□□□□□ -0.2
LSM7-204ENST00000587502 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
LSM7-204ENST00000587502 M0R378 163 aa13.8□□□□□ -0.2
LSM7-204ENST00000587502 FAM229BQ4G0N7 80 aa13.8□□□□□ -0.2
LSM7-204ENST00000587502 TYMSOSQ8TAI1 123 aa13.8□□□□□ -0.2
LSM7-204ENST00000587502 ZNF815PA8K554 130 aa13.79□□□□□ -0.2
LSM7-204ENST00000587502 RNF213Q63HN8 5207 aa13.78□□□□□ -0.2
LSM7-204ENST00000587502 PRLHP81277 87 aa13.78□□□□□ -0.2
LSM7-204ENST00000587502 LITAFQ99732 161 aa13.78□□□□□ -0.2
LSM7-204ENST00000587502 TIMM17BO60830 172 aa13.76□□□□□ -0.21
LSM7-204ENST00000587502 SOSTDC1Q6X4U4 206 aa13.76□□□□□ -0.21
LSM7-204ENST00000587502 NCR3O14931 201 aa13.75□□□□□ -0.21
LSM7-204ENST00000587502 EIF4EBP3O60516 100 aaPredicted RBP13.75□□□□□ -0.21
LSM7-204ENST00000587502 MIEN1Q9BRT3 115 aa13.74□□□□□ -0.21
LSM7-204ENST00000587502 ANAPC11Q9NYG5 84 aa13.74□□□□□ -0.21
LSM7-204ENST00000587502 NDUFC2O95298 119 aa13.72□□□□□ -0.21
LSM7-204ENST00000587502 NPC2P61916 151 aa13.72□□□□□ -0.21
LSM7-204ENST00000587502 PRR4Q16378 134 aa13.72□□□□□ -0.21
LSM7-204ENST00000587502 PCP2Q8IVA1 136 aa13.72□□□□□ -0.21
LSM7-204ENST00000587502 PRYO14603 147 aa13.71□□□□□ -0.21
LSM7-204ENST00000587502 TRBV10-2A0A0K0K1G8 114 aa13.7□□□□□ -0.22
LSM7-204ENST00000587502 TSPAN13O95857 204 aa13.7□□□□□ -0.22
LSM7-204ENST00000587502 S100A12P80511 92 aa13.69□□□□□ -0.22
LSM7-204ENST00000587502 KRTAP13-2Q52LG2 175 aa13.69□□□□□ -0.22
LSM7-204ENST00000587502 LINC00308Q8TCZ7 52 aa13.69□□□□□ -0.22
LSM7-204ENST00000587502 LPAP08519 4548 aa13.68□□□□□ -0.22
LSM7-204ENST00000587502 SCGB1D1O95968 90 aa13.68□□□□□ -0.22
LSM7-204ENST00000587502 HIGD2AQ9BW72 106 aa13.68□□□□□ -0.22
LSM7-204ENST00000587502 KCNQ1DNQ9H478 68 aa13.68□□□□□ -0.22
LSM7-204ENST00000587502 SPANXB1Q9NS25 103 aaPredicted RBP13.68□□□□□ -0.22
LSM7-204ENST00000587502 TMA7Q9Y2S6 64 aaKnown RBP13.68□□□□□ -0.22
LSM7-204ENST00000587502 TRBV10-3A0A0K0K1G6 114 aa13.67□□□□□ -0.22
LSM7-204ENST00000587502 SCGB1D4Q6XE38 83 aa13.67□□□□□ -0.22
LSM7-204ENST00000587502 HSBP1L1C9JCN9 74 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms