RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
VAPA-209ENST00000585042 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
VAPA-209ENST00000585042 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
VAPA-209ENST00000585042 H0Y8G0 127 aa8.87□□□□□ -0.99
VAPA-209ENST00000585042 CRYGAP11844 174 aa8.87□□□□□ -0.99
VAPA-209ENST00000585042 FABP4P15090 132 aa8.87□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 LINC00310P59036 64 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
VAPA-209ENST00000585042 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
VAPA-209ENST00000585042 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
VAPA-209ENST00000585042 MAP1LC3CQ9BXW4 147 aa8.85□□□□□ -0.99
VAPA-209ENST00000585042 IGLV5-37A0A075B6J1 123 aa8.84□□□□□ -0.99
VAPA-209ENST00000585042 A0A087X002 238 aa8.84□□□□□ -0.99
VAPA-209ENST00000585042 TSPAN13O95857 204 aa8.84□□□□□ -0.99
VAPA-209ENST00000585042 PLNP26678 52 aa8.84□□□□□ -0.99
VAPA-209ENST00000585042 TMEM223A0PJW6 202 aa8.83□□□□□ -1
VAPA-209ENST00000585042 CTAG1AP78358 180 aa8.83□□□□□ -1
VAPA-209ENST00000585042 COX17Q14061 63 aa8.82□□□□□ -1
VAPA-209ENST00000585042 RPL37AP8A6NKH3 93 aa8.81□□□□□ -1
VAPA-209ENST00000585042 DPM2O94777 84 aa8.81□□□□□ -1
VAPA-209ENST00000585042 HERVK_113P61574 105 aa8.81□□□□□ -1
VAPA-209ENST00000585042 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
VAPA-209ENST00000585042 MUC2Q02817 5179 aa8.81□□□□□ -1
VAPA-209ENST00000585042 PFN2P35080 140 aa8.8□□□□□ -1
VAPA-209ENST00000585042 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
VAPA-209ENST00000585042 ERG28Q9UKR5 140 aa8.8□□□□□ -1
VAPA-209ENST00000585042 IGKCP01834 107 aa8.79□□□□□ -1
VAPA-209ENST00000585042 NKAPP1Q8N9T2 125 aa8.79□□□□□ -1
VAPA-209ENST00000585042 ZNF625Q96I27 306 aaPredicted RBP8.79□□□□□ -1
VAPA-209ENST00000585042 LINC00587B1AMM8 73 aa8.78□□□□□ -1
VAPA-209ENST00000585042 UBE2AP49459 152 aa8.78□□□□□ -1
VAPA-209ENST00000585042 HERV-K104P63124 156 aa8.78□□□□□ -1
VAPA-209ENST00000585042 ANKRD39Q53RE8 183 aa8.78□□□□□ -1
VAPA-209ENST00000585042 PLEKHB2Q96CS7 222 aa8.78□□□□□ -1
VAPA-209ENST00000585042 GAGE10A6NGK3 116 aa8.77□□□□□ -1.01
VAPA-209ENST00000585042 LINC00158P58513 81 aa8.77□□□□□ -1.01
VAPA-209ENST00000585042 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
VAPA-209ENST00000585042 MYMXA0A1B0GTQ4 84 aa8.76□□□□□ -1.01
VAPA-209ENST00000585042 SYS1-DBNDD2H3BUS1 97 aa8.76□□□□□ -1.01
VAPA-209ENST00000585042 LEPROTO15243 131 aa8.76□□□□□ -1.01
VAPA-209ENST00000585042 S100A6P06703 90 aa8.76□□□□□ -1.01
VAPA-209ENST00000585042 KRTAP13-2Q52LG2 175 aa8.76□□□□□ -1.01
VAPA-209ENST00000585042 TMA7Q9Y2S6 64 aaKnown RBP8.76□□□□□ -1.01
VAPA-209ENST00000585042 RPL24P83731 157 aaKnown RBP8.75□□□□□ -1.01
VAPA-209ENST00000585042 MEIG1Q5JSS6 88 aa8.75□□□□□ -1.01
VAPA-209ENST00000585042 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
VAPA-209ENST00000585042 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
VAPA-209ENST00000585042 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
VAPA-209ENST00000585042 PMCHL2Q9BQD1 86 aa8.74□□□□□ -1.01
VAPA-209ENST00000585042 SND1-IT1Q9HBX3 110 aa8.74□□□□□ -1.01
VAPA-209ENST00000585042 ANAPC11Q9NYG5 84 aa8.74□□□□□ -1.01
VAPA-209ENST00000585042 IGKV2D-26A0A0A0MRZ7 120 aa8.73□□□□□ -1.01
VAPA-209ENST00000585042 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
VAPA-209ENST00000585042 NMUP48645 174 aa8.73□□□□□ -1.01
VAPA-209ENST00000585042 H3BS24 57 aa8.72□□□□□ -1.01
VAPA-209ENST00000585042 J3QQQ9 107 aa8.72□□□□□ -1.01
VAPA-209ENST00000585042 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
VAPA-209ENST00000585042 C20orf202A1L168 122 aa8.71□□□□□ -1.02
VAPA-209ENST00000585042 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
VAPA-209ENST00000585042 TPRXLQ17RH7 258 aa8.71□□□□□ -1.02
VAPA-209ENST00000585042 A0A0U1RRA0 63 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 C5orf52A6NGY3 159 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 SMIM13P0DJ93 91 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 VPREB1P12018 145 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 AKR1D1P51857 326 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 KRTDAPP60985 99 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 TMEM126AQ9H061 195 aa8.7□□□□□ -1.02
VAPA-209ENST00000585042 C3orf79P0CE67 100 aa8.69□□□□□ -1.02
VAPA-209ENST00000585042 SNRPEP62304 92 aaKnown RBP8.69□□□□□ -1.02
VAPA-209ENST00000585042 E9PLD3 99 aa8.68□□□□□ -1.02
VAPA-209ENST00000585042 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
VAPA-209ENST00000585042 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
VAPA-209ENST00000585042 IGLV7-46A0A075B6I9 117 aa8.67□□□□□ -1.02
VAPA-209ENST00000585042 S100A2P29034 98 aa8.67□□□□□ -1.02
VAPA-209ENST00000585042 TSPEAR-AS2P59090 65 aa8.67□□□□□ -1.02
VAPA-209ENST00000585042 SPAG11AQ6PDA7 123 aa8.67□□□□□ -1.02
VAPA-209ENST00000585042 MIR7-3HGQ8N6C7 128 aa8.67□□□□□ -1.02
VAPA-209ENST00000585042 KRTAP9-2Q9BYQ4 174 aa8.67□□□□□ -1.02
VAPA-209ENST00000585042 M0R378 163 aa8.66□□□□□ -1.02
VAPA-209ENST00000585042 PRLHP81277 87 aa8.66□□□□□ -1.02
VAPA-209ENST00000585042 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
VAPA-209ENST00000585042 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
VAPA-209ENST00000585042 BOD1L2Q8IYS8 172 aa8.65□□□□□ -1.02
VAPA-209ENST00000585042 MIEN1Q9BRT3 115 aa8.65□□□□□ -1.02
VAPA-209ENST00000585042 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
VAPA-209ENST00000585042 S100A12P80511 92 aa8.62□□□□□ -1.03
VAPA-209ENST00000585042 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
VAPA-209ENST00000585042 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
VAPA-209ENST00000585042 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms