RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
TOP3A-219ENST00000584887 M0R378 163 aa11.91□□□□□ -0.5
TOP3A-219ENST00000584887 SFTA2Q6UW10 78 aa11.91□□□□□ -0.5
TOP3A-219ENST00000584887 A0A0U1RRA0 63 aa11.9□□□□□ -0.5
TOP3A-219ENST00000584887 APOC3P02656 99 aa11.9□□□□□ -0.5
TOP3A-219ENST00000584887 CBLN2Q8IUK8 224 aa11.89□□□□□ -0.51
TOP3A-219ENST00000584887 HIGD2AQ9BW72 106 aa11.89□□□□□ -0.51
TOP3A-219ENST00000584887 ATP6V1G1O75348 118 aa11.86□□□□□ -0.51
TOP3A-219ENST00000584887 NDUFA5Q16718 116 aa11.86□□□□□ -0.51
TOP3A-219ENST00000584887 A0A0U1RQV1 116 aa11.85□□□□□ -0.51
TOP3A-219ENST00000584887 SNAPINO95295 136 aa11.85□□□□□ -0.51
TOP3A-219ENST00000584887 PLEKHB2Q96CS7 222 aa11.85□□□□□ -0.51
TOP3A-219ENST00000584887 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
TOP3A-219ENST00000584887 SVBPQ8N300 66 aa11.84□□□□□ -0.51
TOP3A-219ENST00000584887 C3orf22Q8N5N4 141 aa11.84□□□□□ -0.51
TOP3A-219ENST00000584887 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
TOP3A-219ENST00000584887 SMIM13P0DJ93 91 aa11.82□□□□□ -0.52
TOP3A-219ENST00000584887 MEIG1Q5JSS6 88 aa11.82□□□□□ -0.52
TOP3A-219ENST00000584887 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
TOP3A-219ENST00000584887 NCR3O14931 201 aa11.81□□□□□ -0.52
TOP3A-219ENST00000584887 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
TOP3A-219ENST00000584887 CHCHD1Q96BP2 118 aaKnown RBP11.81□□□□□ -0.52
TOP3A-219ENST00000584887 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
TOP3A-219ENST00000584887 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
TOP3A-219ENST00000584887 MIR7-3HGQ8N6C7 128 aa11.78□□□□□ -0.52
TOP3A-219ENST00000584887 SPRR4Q96PI1 79 aa11.78□□□□□ -0.52
TOP3A-219ENST00000584887 H0Y8G0 127 aa11.77□□□□□ -0.53
TOP3A-219ENST00000584887 PRYO14603 147 aa11.77□□□□□ -0.53
TOP3A-219ENST00000584887 HSBP1O75506 76 aa11.76□□□□□ -0.53
TOP3A-219ENST00000584887 FAM19A2Q8N3H0 131 aa11.76□□□□□ -0.53
TOP3A-219ENST00000584887 ZNF706Q9Y5V0 76 aaPredicted RBP11.76□□□□□ -0.53
TOP3A-219ENST00000584887 HERV-K104P63124 156 aa11.75□□□□□ -0.53
TOP3A-219ENST00000584887 YPEL4Q96NS1 127 aa11.75□□□□□ -0.53
TOP3A-219ENST00000584887 NDUFA12Q9UI09 145 aa11.75□□□□□ -0.53
TOP3A-219ENST00000584887 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
TOP3A-219ENST00000584887 ETDCA0A1B0GVM5 59 aa11.73□□□□□ -0.53
TOP3A-219ENST00000584887 MUC2Q02817 5179 aa11.73□□□□□ -0.53
TOP3A-219ENST00000584887 C4orf48Q5BLP8 95 aa11.73□□□□□ -0.53
TOP3A-219ENST00000584887 PPDPFQ9H3Y8 114 aa11.73□□□□□ -0.53
TOP3A-219ENST00000584887 MYMXA0A1B0GTQ4 84 aa11.72□□□□□ -0.53
TOP3A-219ENST00000584887 CTAG1AP78358 180 aa11.72□□□□□ -0.53
TOP3A-219ENST00000584887 SPAG11AQ6PDA7 123 aa11.72□□□□□ -0.53
TOP3A-219ENST00000584887 LINC00587B1AMM8 73 aa11.71□□□□□ -0.53
TOP3A-219ENST00000584887 SMCR5Q8TEV8 140 aa11.71□□□□□ -0.53
TOP3A-219ENST00000584887 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
TOP3A-219ENST00000584887 TRBV10-3A0A0K0K1G6 114 aa11.7□□□□□ -0.54
TOP3A-219ENST00000584887 LINC00337Q8N6G1 96 aa11.7□□□□□ -0.54
TOP3A-219ENST00000584887 DAND5Q8N907 189 aa11.7□□□□□ -0.54
TOP3A-219ENST00000584887 KCNQ1DNQ9H478 68 aa11.7□□□□□ -0.54
TOP3A-219ENST00000584887 Q8NBF4 154 aa11.69□□□□□ -0.54
TOP3A-219ENST00000584887 SPRR1AP35321 89 aa11.68□□□□□ -0.54
TOP3A-219ENST00000584887 TSPEAR-AS2P59090 65 aa11.68□□□□□ -0.54
TOP3A-219ENST00000584887 S100A12P80511 92 aa11.68□□□□□ -0.54
TOP3A-219ENST00000584887 LEPROTO15243 131 aa11.65□□□□□ -0.54
TOP3A-219ENST00000584887 LEPROTL1O95214 131 aa11.65□□□□□ -0.54
TOP3A-219ENST00000584887 GAGE2AQ6NT46 116 aa11.65□□□□□ -0.54
TOP3A-219ENST00000584887 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-219ENST00000584887 SERF1AO75920 110 aa11.64□□□□□ -0.55
TOP3A-219ENST00000584887 TRGC2P03986 189 aa11.64□□□□□ -0.55
TOP3A-219ENST00000584887 PLNP26678 52 aa11.63□□□□□ -0.55
TOP3A-219ENST00000584887 DDTP30046 118 aa11.62□□□□□ -0.55
TOP3A-219ENST00000584887 HERVK_113P61574 105 aa11.62□□□□□ -0.55
TOP3A-219ENST00000584887 FP248Q71RG6 208 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-219ENST00000584887 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
TOP3A-219ENST00000584887 B5MCH6 92 aa11.61□□□□□ -0.55
TOP3A-219ENST00000584887 J3QQQ9 107 aa11.61□□□□□ -0.55
TOP3A-219ENST00000584887 FABP4P15090 132 aa11.61□□□□□ -0.55
TOP3A-219ENST00000584887 MIEN1Q9BRT3 115 aa11.61□□□□□ -0.55
TOP3A-219ENST00000584887 IGLV9-49A0A0B4J1Y8 123 aa11.6□□□□□ -0.55
TOP3A-219ENST00000584887 DPM2O94777 84 aa11.6□□□□□ -0.55
TOP3A-219ENST00000584887 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
TOP3A-219ENST00000584887 LINC00310P59036 64 aa11.6□□□□□ -0.55
TOP3A-219ENST00000584887 MOBPQ13875 183 aa11.6□□□□□ -0.55
TOP3A-219ENST00000584887 HSPB8Q9UJY1 196 aa11.6□□□□□ -0.55
TOP3A-219ENST00000584887 ERC2-IT1O76042 136 aa11.59□□□□□ -0.55
TOP3A-219ENST00000584887 LINC00483Q53H64 154 aa11.59□□□□□ -0.55
TOP3A-219ENST00000584887 TRBV10-2A0A0K0K1G8 114 aa11.58□□□□□ -0.56
TOP3A-219ENST00000584887 S100A7L2Q5SY68 101 aa11.58□□□□□ -0.56
TOP3A-219ENST00000584887 SPANXB1Q9NS25 103 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-219ENST00000584887 SPINK1P00995 79 aa11.57□□□□□ -0.56
TOP3A-219ENST00000584887 LOC107984156A0A0G2JMH3 177 aa11.56□□□□□ -0.56
TOP3A-219ENST00000584887 IGKCP01834 107 aa11.56□□□□□ -0.56
TOP3A-219ENST00000584887 NMUP48645 174 aa11.56□□□□□ -0.56
TOP3A-219ENST00000584887 LCE2AQ5TA79 106 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-219ENST00000584887 ARL17AQ8IVW1 177 aa11.56□□□□□ -0.56
TOP3A-219ENST00000584887 Q6ZRX8 168 aa11.55□□□□□ -0.56
TOP3A-219ENST00000584887 Q9BRP9 147 aa11.55□□□□□ -0.56
TOP3A-219ENST00000584887 FAT4Q6V0I7 4981 aa11.54□□□□□ -0.56
TOP3A-219ENST00000584887 NPC2P61916 151 aa11.54□□□□□ -0.56
TOP3A-219ENST00000584887 KRTAP13-3Q3SY46 172 aa11.54□□□□□ -0.56
TOP3A-219ENST00000584887 KRTAP9-2Q9BYQ4 174 aa11.52□□□□□ -0.57
TOP3A-219ENST00000584887 TRAV23DV6A0A075B6W5 121 aa11.51□□□□□ -0.57
TOP3A-219ENST00000584887 NDUFC2O95298 119 aa11.5□□□□□ -0.57
TOP3A-219ENST00000584887 IGLV6-57P01721 117 aa11.5□□□□□ -0.57
TOP3A-219ENST00000584887 C9orf153Q5TBE3 101 aa11.5□□□□□ -0.57
TOP3A-219ENST00000584887 SSBP3-AS1Q7Z2R9 100 aa11.5□□□□□ -0.57
TOP3A-219ENST00000584887 JOSD1Q15040 202 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-219ENST00000584887 SOSTDC1Q6X4U4 206 aa11.49□□□□□ -0.57
TOP3A-219ENST00000584887 MUC17Q685J3 4493 aa11.49□□□□□ -0.57
TOP3A-219ENST00000584887 A0A0J9YXY3 114 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms