RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 LINC00310P59036 64 aa4.92□□□□□ -1.62
CTC1-213ENST00000584842 ZNF625Q96I27 306 aaPredicted RBP4.92□□□□□ -1.62
CTC1-213ENST00000584842 PLA2G2DQ9UNK4 145 aa4.92□□□□□ -1.62
CTC1-213ENST00000584842 LINC00587B1AMM8 73 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BKO60814 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BJP06899 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BOP23527 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BBP33778 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 LINC00158P58513 81 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BDP58876 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BCP62807 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HERV-K104P63124 156 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 RPL24P83731 157 aaKnown RBP4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST2H2BEQ16778 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 MEIG1Q5JSS6 88 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.91□□□□□ -1.62
CTC1-213ENST00000584842 KRTAP7-1Q8IUC3 87 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BHQ93079 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 PLEKHB2Q96CS7 222 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BNQ99877 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 HIST1H2BMQ99879 126 aa4.91□□□□□ -1.62
CTC1-213ENST00000584842 IGLV5-37A0A075B6J1 123 aa4.9□□□□□ -1.63
CTC1-213ENST00000584842 MYMXA0A1B0GTQ4 84 aa4.9□□□□□ -1.63
CTC1-213ENST00000584842 PCP4L1A6NKN8 68 aa4.9□□□□□ -1.63
CTC1-213ENST00000584842 IGKCP01834 107 aa4.9□□□□□ -1.63
CTC1-213ENST00000584842 SRSF9Q13242 221 aaKnown RBP eCLIP4.9□□□□□ -1.63
CTC1-213ENST00000584842 LINC01600Q96MT4 127 aa4.9□□□□□ -1.63
CTC1-213ENST00000584842 SND1-IT1Q9HBX3 110 aa4.9□□□□□ -1.63
CTC1-213ENST00000584842 H0Y9J4 135 aa4.89□□□□□ -1.63
CTC1-213ENST00000584842 LEPROTO15243 131 aa4.89□□□□□ -1.63
CTC1-213ENST00000584842 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
CTC1-213ENST00000584842 SEC61GP60059 68 aa4.89□□□□□ -1.63
CTC1-213ENST00000584842 NDUFA12Q9UI09 145 aa4.89□□□□□ -1.63
CTC1-213ENST00000584842 RPL37AP8A6NKH3 93 aa4.88□□□□□ -1.63
CTC1-213ENST00000584842 BCE1O60756 84 aa4.88□□□□□ -1.63
CTC1-213ENST00000584842 RPL28P46779 137 aaKnown RBP4.88□□□□□ -1.63
CTC1-213ENST00000584842 NMUP48645 174 aa4.88□□□□□ -1.63
CTC1-213ENST00000584842 KRTAP11-1Q8IUC1 163 aa4.88□□□□□ -1.63
CTC1-213ENST00000584842 LINC00167Q96N53 147 aa4.88□□□□□ -1.63
CTC1-213ENST00000584842 C12orf57Q99622 126 aa4.88□□□□□ -1.63
CTC1-213ENST00000584842 PMCHL2Q9BQD1 86 aa4.88□□□□□ -1.63
CTC1-213ENST00000584842 B5MCH6 92 aa4.87□□□□□ -1.63
CTC1-213ENST00000584842 SYS1-DBNDD2H3BUS1 97 aa4.87□□□□□ -1.63
CTC1-213ENST00000584842 J3QQQ9 107 aa4.87□□□□□ -1.63
CTC1-213ENST00000584842 SMIM13P0DJ93 91 aa4.87□□□□□ -1.63
CTC1-213ENST00000584842 MT1HL1P0DM35 61 aa4.87□□□□□ -1.63
CTC1-213ENST00000584842 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 IGKV2-28A0A075B6P5 120 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 C20orf202A1L168 122 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 ZNF861PO60384 105 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 IGKV2D-28P01615 120 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 UBE2AP49459 152 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 MIEN1Q9BRT3 115 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 HERC1Q15751 4861 aa4.86□□□□□ -1.63
CTC1-213ENST00000584842 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
CTC1-213ENST00000584842 SMIM6P0DI80 62 aa4.85□□□□□ -1.63
CTC1-213ENST00000584842 KRTDAPP60985 99 aa4.85□□□□□ -1.63
CTC1-213ENST00000584842 COA6Q5JTJ3 125 aaKnown RBP4.85□□□□□ -1.63
CTC1-213ENST00000584842 BOD1L2Q8IYS8 172 aa4.85□□□□□ -1.63
CTC1-213ENST00000584842 MIR7-3HGQ8N6C7 128 aa4.85□□□□□ -1.63
CTC1-213ENST00000584842 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
CTC1-213ENST00000584842 KRTAP3-2Q9BYR7 98 aa4.85□□□□□ -1.63
CTC1-213ENST00000584842 IGLV1-50A0A075B6I6 118 aa4.84□□□□□ -1.63
CTC1-213ENST00000584842 E9PLD3 99 aa4.84□□□□□ -1.63
CTC1-213ENST00000584842 M0R378 163 aa4.84□□□□□ -1.63
CTC1-213ENST00000584842 RPL13AP40429 203 aaKnown RBP4.84□□□□□ -1.63
CTC1-213ENST00000584842 AKR1D1P51857 326 aa4.84□□□□□ -1.63
CTC1-213ENST00000584842 TSPEAR-AS2P59090 65 aa4.84□□□□□ -1.63
CTC1-213ENST00000584842 LINC01545Q5VT33 79 aa4.84□□□□□ -1.63
CTC1-213ENST00000584842 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
CTC1-213ENST00000584842 NCR3O14931 201 aa4.83□□□□□ -1.64
CTC1-213ENST00000584842 FAM19A1Q7Z5A9 133 aa4.83□□□□□ -1.64
CTC1-213ENST00000584842 TMEM126AQ9H061 195 aa4.83□□□□□ -1.64
CTC1-213ENST00000584842 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
CTC1-213ENST00000584842 C3orf79P0CE67 100 aa4.82□□□□□ -1.64
CTC1-213ENST00000584842 SMCPP49901 116 aaPredicted RBP4.82□□□□□ -1.64
CTC1-213ENST00000584842 KRTAP10-8P60410 259 aa4.82□□□□□ -1.64
CTC1-213ENST00000584842 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
CTC1-213ENST00000584842 TMEM238C9JI98 176 aa4.81□□□□□ -1.64
CTC1-213ENST00000584842 PRYO14603 147 aa4.81□□□□□ -1.64
CTC1-213ENST00000584842 S100A2P29034 98 aa4.81□□□□□ -1.64
CTC1-213ENST00000584842 SNRPEP62304 92 aaKnown RBP4.81□□□□□ -1.64
CTC1-213ENST00000584842 PRR26Q8N8Z3 221 aa4.81□□□□□ -1.64
CTC1-213ENST00000584842 DAND5Q8N907 189 aa4.81□□□□□ -1.64
CTC1-213ENST00000584842 A0A0J9YXY3 114 aa4.8□□□□□ -1.64
CTC1-213ENST00000584842 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
CTC1-213ENST00000584842 KRTAP1-4P0C5Y4 121 aa4.8□□□□□ -1.64
CTC1-213ENST00000584842 PRLHP81277 87 aa4.8□□□□□ -1.64
CTC1-213ENST00000584842 Q8NDZ9 215 aa4.8□□□□□ -1.64
CTC1-213ENST00000584842 SPANXB1Q9NS25 103 aaPredicted RBP4.8□□□□□ -1.64
CTC1-213ENST00000584842 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 TRBV10-2A0A0K0K1G8 114 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 ETDCA0A1B0GVM5 59 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 TRIAP1O43715 76 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 TIMM17BO60830 172 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 CRYGAP11844 174 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 S100A7L2Q5SY68 101 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 KRTAP13-1Q8IUC0 172 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
CTC1-213ENST00000584842 TRBV10-3A0A0K0K1G6 114 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms