RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 IGKV2D-28P01615 120 aa9.08□□□□□ -0.96
UBBP4-202ENST00000584755 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
UBBP4-202ENST00000584755 Q6ZRP5 223 aa9.08□□□□□ -0.96
UBBP4-202ENST00000584755 H3BUT2 72 aa9.07□□□□□ -0.96
UBBP4-202ENST00000584755 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
UBBP4-202ENST00000584755 LINC00337Q8N6G1 96 aa9.06□□□□□ -0.96
UBBP4-202ENST00000584755 Q8NDZ9 215 aa9.06□□□□□ -0.96
UBBP4-202ENST00000584755 A0A087WTM6 91 aa9.05□□□□□ -0.96
UBBP4-202ENST00000584755 TRAV13-2A0A0B4J235 113 aa9.05□□□□□ -0.96
UBBP4-202ENST00000584755 A0A1W2PPM0 123 aa9.05□□□□□ -0.96
UBBP4-202ENST00000584755 NAA38Q9BRA0 125 aaKnown RBP9.05□□□□□ -0.96
UBBP4-202ENST00000584755 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
UBBP4-202ENST00000584755 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
UBBP4-202ENST00000584755 RPL13AP40429 203 aaKnown RBP9.04□□□□□ -0.96
UBBP4-202ENST00000584755 Q8N814 137 aa9.04□□□□□ -0.96
UBBP4-202ENST00000584755 LOC107984640A0A0U1RRK4 108 aa9.03□□□□□ -0.96
UBBP4-202ENST00000584755 GAGE2EQ4V326 116 aa9.02□□□□□ -0.96
UBBP4-202ENST00000584755 C9orf129Q5T035 196 aaKnown RBP9.02□□□□□ -0.96
UBBP4-202ENST00000584755 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.96
UBBP4-202ENST00000584755 TRBV10-2A0A0K0K1G8 114 aa9.02□□□□□ -0.97
UBBP4-202ENST00000584755 FABP2P12104 132 aa9.02□□□□□ -0.97
UBBP4-202ENST00000584755 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
UBBP4-202ENST00000584755 SACSQ9NZJ4 4579 aa9.01□□□□□ -0.97
UBBP4-202ENST00000584755 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.01□□□□□ -0.97
UBBP4-202ENST00000584755 H7C2G1 150 aa9.01□□□□□ -0.97
UBBP4-202ENST00000584755 VPREB1P12018 145 aa9.01□□□□□ -0.97
UBBP4-202ENST00000584755 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
UBBP4-202ENST00000584755 RPL18AQ02543 176 aaKnown RBP9.01□□□□□ -0.97
UBBP4-202ENST00000584755 UBE2V1Q13404 147 aa9.01□□□□□ -0.97
UBBP4-202ENST00000584755 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
UBBP4-202ENST00000584755 Q1RN00 199 aa9□□□□□ -0.97
UBBP4-202ENST00000584755 FRAS1Q86XX4 4008 aa9□□□□□ -0.97
UBBP4-202ENST00000584755 VAMP3Q15836 100 aa8.99□□□□□ -0.97
UBBP4-202ENST00000584755 HECTD4Q9Y4D8 3996 aa8.98□□□□□ -0.97
UBBP4-202ENST00000584755 TRIAP1O43715 76 aa8.98□□□□□ -0.97
UBBP4-202ENST00000584755 RPL28P46779 137 aaKnown RBP8.98□□□□□ -0.97
UBBP4-202ENST00000584755 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 LCE6AA0A183 80 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 C16orf90A8MZG2 172 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 K7EP34 96 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 NCR3O14931 201 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 RTL8CO15255 209 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 IGLV6-57P01721 117 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 LYRM7Q5U5X0 104 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
UBBP4-202ENST00000584755 PSMB2P49721 201 aa8.96□□□□□ -0.97
UBBP4-202ENST00000584755 GAGE2BQ13066 116 aa8.96□□□□□ -0.97
UBBP4-202ENST00000584755 OR13C6PQ8NH95 151 aa8.96□□□□□ -0.97
UBBP4-202ENST00000584755 HYDINQ4G0P3 5121 aa8.96□□□□□ -0.97
UBBP4-202ENST00000584755 A0A096LNI7 61 aa8.96□□□□□ -0.98
UBBP4-202ENST00000584755 M0R378 163 aa8.96□□□□□ -0.98
UBBP4-202ENST00000584755 SMIM11BQ8TCY0 68 aa8.96□□□□□ -0.98
UBBP4-202ENST00000584755 GAGE10A6NGK3 116 aa8.95□□□□□ -0.98
UBBP4-202ENST00000584755 TNP2Q05952 138 aa8.95□□□□□ -0.98
UBBP4-202ENST00000584755 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
UBBP4-202ENST00000584755 SDIM1Q6ZPB5 146 aa8.95□□□□□ -0.98
UBBP4-202ENST00000584755 GTF2H5Q6ZYL4 71 aa8.95□□□□□ -0.98
UBBP4-202ENST00000584755 K7ERU9 68 aa8.94□□□□□ -0.98
UBBP4-202ENST00000584755 COX6CP09669 75 aa8.94□□□□□ -0.98
UBBP4-202ENST00000584755 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
UBBP4-202ENST00000584755 VPS25Q9BRG1 176 aa8.94□□□□□ -0.98
UBBP4-202ENST00000584755 DNAH11Q96DT5 4516 aa8.93□□□□□ -0.98
UBBP4-202ENST00000584755 FAT2Q9NYQ8 4349 aa8.93□□□□□ -0.98
UBBP4-202ENST00000584755 TRBV20-1A0A075B6N2 111 aa8.93□□□□□ -0.98
UBBP4-202ENST00000584755 SCGB1C2P0DMR2 95 aa8.93□□□□□ -0.98
UBBP4-202ENST00000584755 S100A7L2Q5SY68 101 aa8.93□□□□□ -0.98
UBBP4-202ENST00000584755 TRBV10-3A0A0K0K1G6 114 aa8.92□□□□□ -0.98
UBBP4-202ENST00000584755 FAM168BA1KXE4 195 aa8.92□□□□□ -0.98
UBBP4-202ENST00000584755 TCL1BO95988 128 aa8.92□□□□□ -0.98
UBBP4-202ENST00000584755 SCGB1A1P11684 91 aa8.91□□□□□ -0.98
UBBP4-202ENST00000584755 NKAPP1Q8N9T2 125 aa8.9□□□□□ -0.98
UBBP4-202ENST00000584755 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.98
UBBP4-202ENST00000584755 IGKV2-24A0A0C4DH68 120 aa8.89□□□□□ -0.99
UBBP4-202ENST00000584755 LINC01620Q4KN68 170 aa8.89□□□□□ -0.99
UBBP4-202ENST00000584755 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
UBBP4-202ENST00000584755 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
UBBP4-202ENST00000584755 TRAV23DV6A0A075B6W5 121 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 A0A1W2PNN7 141 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 H0YGX0 51 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 H3BMG7 143 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 LST1O00453 97 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 CHTF8P0CG12 524 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 ATXN8Q156A1 80 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 OCIAD2Q56VL3 154 aa8.88□□□□□ -0.99
UBBP4-202ENST00000584755 DNAH5Q8TE73 4624 aa8.87□□□□□ -0.99
UBBP4-202ENST00000584755 IGLV5-52A0A0A0MRZ9 124 aa8.87□□□□□ -0.99
UBBP4-202ENST00000584755 EPM2AB3EWF7 344 aa8.87□□□□□ -0.99
UBBP4-202ENST00000584755 FAM19A5Q7Z5A7 132 aaPredicted RBP8.87□□□□□ -0.99
UBBP4-202ENST00000584755 CLEC2BQ92478 149 aa8.87□□□□□ -0.99
UBBP4-202ENST00000584755 C6orf99Q4VX62 202 aa8.86□□□□□ -0.99
UBBP4-202ENST00000584755 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
UBBP4-202ENST00000584755 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
UBBP4-202ENST00000584755 KCNQ1DNQ9H478 68 aa8.86□□□□□ -0.99
UBBP4-202ENST00000584755 PKD1P98161 4303 aa8.85□□□□□ -0.99
UBBP4-202ENST00000584755 IGLV1-50A0A075B6I6 118 aa8.85□□□□□ -0.99
UBBP4-202ENST00000584755 PANO1I0J062 215 aa8.85□□□□□ -0.99
UBBP4-202ENST00000584755 FUSP35637 526 aaKnown RBP eCLIP8.85□□□□□ -0.99
UBBP4-202ENST00000584755 FAM218AQ96MZ4 157 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms