RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 FAM236AA0A1B0GUQ0 79 aa7.75□□□□□ -1.17
TOP3A-217ENST00000584582 FAM236BA0A1B0GV22 79 aa7.75□□□□□ -1.17
TOP3A-217ENST00000584582 A0A1B0GUV1 79 aa7.75□□□□□ -1.17
TOP3A-217ENST00000584582 SDIM1Q6ZPB5 146 aa7.74□□□□□ -1.17
TOP3A-217ENST00000584582 KRTAP10-11P60412 298 aa7.74□□□□□ -1.17
TOP3A-217ENST00000584582 IGKV2-24A0A0C4DH68 120 aa7.74□□□□□ -1.17
TOP3A-217ENST00000584582 SHISA2Q6UWI4 295 aa7.73□□□□□ -1.17
TOP3A-217ENST00000584582 SMIM20Q8N5G0 67 aa7.73□□□□□ -1.17
TOP3A-217ENST00000584582 TRACP01848 142 aa7.73□□□□□ -1.17
TOP3A-217ENST00000584582 CXCL5P42830 114 aa7.73□□□□□ -1.17
TOP3A-217ENST00000584582 ESRGQ1W209 222 aa7.72□□□□□ -1.17
TOP3A-217ENST00000584582 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-217ENST00000584582 Q6ZQY7 126 aa7.72□□□□□ -1.17
TOP3A-217ENST00000584582 RPL28P46779 137 aaKnown RBP7.71□□□□□ -1.18
TOP3A-217ENST00000584582 RPL37AP8A6NKH3 93 aa7.71□□□□□ -1.18
TOP3A-217ENST00000584582 WFDC9Q8NEX5 89 aa7.71□□□□□ -1.18
TOP3A-217ENST00000584582 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
TOP3A-217ENST00000584582 ENHOQ6UWT2 76 aa7.69□□□□□ -1.18
TOP3A-217ENST00000584582 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
TOP3A-217ENST00000584582 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
TOP3A-217ENST00000584582 CCDC179H3BU77 68 aa7.68□□□□□ -1.18
TOP3A-217ENST00000584582 Q6ZRU5 148 aa7.68□□□□□ -1.18
TOP3A-217ENST00000584582 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
TOP3A-217ENST00000584582 DSCR8Q96T75 97 aa7.68□□□□□ -1.18
TOP3A-217ENST00000584582 NDUFV3P56181 108 aaKnown RBP7.68□□□□□ -1.18
TOP3A-217ENST00000584582 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
TOP3A-217ENST00000584582 A0A087WVE0 104 aa7.66□□□□□ -1.18
TOP3A-217ENST00000584582 C9orf129Q5T035 196 aaKnown RBP7.66□□□□□ -1.18
TOP3A-217ENST00000584582 FAM19A5Q7Z5A7 132 aaPredicted RBP7.66□□□□□ -1.18
TOP3A-217ENST00000584582 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
TOP3A-217ENST00000584582 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
TOP3A-217ENST00000584582 RBM3P98179 157 aaKnown RBP7.65□□□□□ -1.18
TOP3A-217ENST00000584582 TRAV23DV6A0A075B6W5 121 aa7.65□□□□□ -1.19
TOP3A-217ENST00000584582 UBE2BP63146 152 aa7.65□□□□□ -1.19
TOP3A-217ENST00000584582 M0R2N4 97 aa7.64□□□□□ -1.19
TOP3A-217ENST00000584582 TMEM256-PLSCR3K7ERE1 68 aa7.64□□□□□ -1.19
TOP3A-217ENST00000584582 COX7BP24311 80 aa7.64□□□□□ -1.19
TOP3A-217ENST00000584582 C9orf153Q5TBE3 101 aa7.64□□□□□ -1.19
TOP3A-217ENST00000584582 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
TOP3A-217ENST00000584582 LINC00612Q8N6U2 182 aa7.64□□□□□ -1.19
TOP3A-217ENST00000584582 Q8N814 137 aa7.64□□□□□ -1.19
TOP3A-217ENST00000584582 LINC00643Q86TS7 51 aa7.63□□□□□ -1.19
TOP3A-217ENST00000584582 TENM2Q9NT68 2774 aa7.63□□□□□ -1.19
TOP3A-217ENST00000584582 ACYP1P07311 99 aa7.63□□□□□ -1.19
TOP3A-217ENST00000584582 TRAV10A0A0B4J240 114 aa7.62□□□□□ -1.19
TOP3A-217ENST00000584582 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
TOP3A-217ENST00000584582 ZNF73O43830 326 aaPredicted RBP7.62□□□□□ -1.19
TOP3A-217ENST00000584582 LINC00846Q9NV44 126 aa7.62□□□□□ -1.19
TOP3A-217ENST00000584582 A0A096LNI7 61 aa7.62□□□□□ -1.19
TOP3A-217ENST00000584582 A0A1B0GX51 115 aa7.62□□□□□ -1.19
TOP3A-217ENST00000584582 KLK5Q9Y337 293 aaPredicted RBP7.61□□□□□ -1.19
TOP3A-217ENST00000584582 COX17Q14061 63 aa7.61□□□□□ -1.19
TOP3A-217ENST00000584582 USP17L23D6RBM5 183 aa7.6□□□□□ -1.19
TOP3A-217ENST00000584582 FAM19A3Q7Z5A8 133 aa7.6□□□□□ -1.19
TOP3A-217ENST00000584582 JMJD7-PLA2G4BH0Y9G9 81 aa7.59□□□□□ -1.19
TOP3A-217ENST00000584582 C3orf84H3BNL1 204 aa7.59□□□□□ -1.19
TOP3A-217ENST00000584582 HIGD2AQ9BW72 106 aa7.59□□□□□ -1.19
TOP3A-217ENST00000584582 Q8NDZ9 215 aa7.58□□□□□ -1.2
TOP3A-217ENST00000584582 SMCR5Q8TEV8 140 aa7.58□□□□□ -1.2
TOP3A-217ENST00000584582 RMI2Q96E14 147 aa7.57□□□□□ -1.2
TOP3A-217ENST00000584582 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
TOP3A-217ENST00000584582 AKAP9Q99996 3911 aa7.56□□□□□ -1.2
TOP3A-217ENST00000584582 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
TOP3A-217ENST00000584582 C3orf22Q8N5N4 141 aa7.56□□□□□ -1.2
TOP3A-217ENST00000584582 EGFEM1PQ0D2K5 195 aa7.56□□□□□ -1.2
TOP3A-217ENST00000584582 LINC00575Q6W349 94 aa7.55□□□□□ -1.2
TOP3A-217ENST00000584582 LINC00588Q9Y4M8 146 aa7.55□□□□□ -1.2
TOP3A-217ENST00000584582 ANK3Q12955 4377 aaKnown RBP7.55□□□□□ -1.2
TOP3A-217ENST00000584582 M0R378 163 aa7.55□□□□□ -1.2
TOP3A-217ENST00000584582 Q6ZRP5 223 aa7.55□□□□□ -1.2
TOP3A-217ENST00000584582 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
TOP3A-217ENST00000584582 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
TOP3A-217ENST00000584582 PPDPFQ9H3Y8 114 aa7.54□□□□□ -1.2
TOP3A-217ENST00000584582 NDUFC2O95298 119 aa7.54□□□□□ -1.2
TOP3A-217ENST00000584582 CCKP06307 115 aa7.54□□□□□ -1.2
TOP3A-217ENST00000584582 GHRHP01286 108 aa7.54□□□□□ -1.2
TOP3A-217ENST00000584582 K7EIL1 84 aa7.53□□□□□ -1.2
TOP3A-217ENST00000584582 PRR34Q9NV39 138 aa7.53□□□□□ -1.2
TOP3A-217ENST00000584582 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
TOP3A-217ENST00000584582 NHLRC4P0CG21 123 aaPredicted RBP7.52□□□□□ -1.21
TOP3A-217ENST00000584582 UPK3BQ9BT76 320 aa7.52□□□□□ -1.21
TOP3A-217ENST00000584582 M0QXV9 152 aa7.52□□□□□ -1.21
TOP3A-217ENST00000584582 F8WEM9 126 aa7.51□□□□□ -1.21
TOP3A-217ENST00000584582 LINC01556Q5JQF7 62 aa7.51□□□□□ -1.21
TOP3A-217ENST00000584582 C15orf56Q8N910 161 aa7.51□□□□□ -1.21
TOP3A-217ENST00000584582 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
TOP3A-217ENST00000584582 NREPQ16612 68 aa7.5□□□□□ -1.21
TOP3A-217ENST00000584582 Q8N9L7 120 aa7.5□□□□□ -1.21
TOP3A-217ENST00000584582 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
TOP3A-217ENST00000584582 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
TOP3A-217ENST00000584582 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.49□□□□□ -1.21
TOP3A-217ENST00000584582 LINC01561Q8N1V8 128 aa7.49□□□□□ -1.21
TOP3A-217ENST00000584582 C20orf197Q8N268 126 aa7.48□□□□□ -1.21
TOP3A-217ENST00000584582 PRLHP81277 87 aa7.47□□□□□ -1.21
TOP3A-217ENST00000584582 MDFIQ99750 246 aa7.47□□□□□ -1.21
TOP3A-217ENST00000584582 ATOX1O00244 68 aa7.47□□□□□ -1.21
TOP3A-217ENST00000584582 CHTF8P0CG12 524 aa7.46□□□□□ -1.21
TOP3A-217ENST00000584582 VPREB1P12018 145 aa7.46□□□□□ -1.21
TOP3A-217ENST00000584582 DEFB116Q30KQ4 102 aa7.45□□□□□ -1.22
TOP3A-217ENST00000584582 A0A0G2JQZ4 141 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms