RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 LRCOL1A6NCL2 159 aa11.59□□□□□ -0.55
SNX11-212ENST00000583320 PLA2G1BP04054 148 aaKnown RBP11.59□□□□□ -0.55
SNX11-212ENST00000583320 IFITM1P13164 125 aa11.59□□□□□ -0.55
SNX11-212ENST00000583320 PTTG1IPP53801 180 aa11.59□□□□□ -0.55
SNX11-212ENST00000583320 CEND1Q8N111 149 aa11.59□□□□□ -0.55
SNX11-212ENST00000583320 CAMK2N2Q96S95 79 aa11.59□□□□□ -0.55
SNX11-212ENST00000583320 ERG28Q9UKR5 140 aa11.59□□□□□ -0.55
SNX11-212ENST00000583320 BVES-AS1Q5T3Y7 98 aa11.58□□□□□ -0.56
SNX11-212ENST00000583320 ADAMTSL4-AS1Q5T5F5 129 aa11.58□□□□□ -0.56
SNX11-212ENST00000583320 UNQ6190/PRO20217Q6UXQ8 127 aa11.58□□□□□ -0.56
SNX11-212ENST00000583320 COPS9Q8WXC6 57 aa11.58□□□□□ -0.56
SNX11-212ENST00000583320 SMIM13P0DJ93 91 aa11.57□□□□□ -0.56
SNX11-212ENST00000583320 RNF151Q2KHN1 245 aa11.57□□□□□ -0.56
SNX11-212ENST00000583320 LINC00526Q96FQ7 95 aa11.57□□□□□ -0.56
SNX11-212ENST00000583320 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
SNX11-212ENST00000583320 SYCNQ0VAF6 134 aa11.56□□□□□ -0.56
SNX11-212ENST00000583320 C10orf25Q5T742 122 aa11.56□□□□□ -0.56
SNX11-212ENST00000583320 LINC00158P58513 81 aa11.55□□□□□ -0.56
SNX11-212ENST00000583320 KRTAP10-4P60372 401 aaPredicted RBP11.55□□□□□ -0.56
SNX11-212ENST00000583320 SNHG12Q9BXW3 62 aa11.55□□□□□ -0.56
SNX11-212ENST00000583320 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
SNX11-212ENST00000583320 Q6ZRU5 148 aa11.54□□□□□ -0.56
SNX11-212ENST00000583320 PKHD1L1Q86WI1 4243 aa11.54□□□□□ -0.56
SNX11-212ENST00000583320 TMEM238LA0A1B0GVL6 79 aa11.53□□□□□ -0.56
SNX11-212ENST00000583320 A6NJY4 79 aa11.53□□□□□ -0.56
SNX11-212ENST00000583320 RPL24P83731 157 aaKnown RBP11.53□□□□□ -0.56
SNX11-212ENST00000583320 Q6ZSA8 131 aa11.53□□□□□ -0.56
SNX11-212ENST00000583320 MUSTN1Q8IVN3 82 aa11.53□□□□□ -0.56
SNX11-212ENST00000583320 MIR7-3HGQ8N6C7 128 aa11.53□□□□□ -0.56
SNX11-212ENST00000583320 Q8N814 137 aa11.53□□□□□ -0.56
SNX11-212ENST00000583320 PFN2P35080 140 aa11.52□□□□□ -0.57
SNX11-212ENST00000583320 LINC00308Q8TCZ7 52 aa11.52□□□□□ -0.57
SNX11-212ENST00000583320 CARD19Q96LW7 228 aa11.52□□□□□ -0.57
SNX11-212ENST00000583320 LOC107984156A0A0G2JMH3 177 aa11.51□□□□□ -0.57
SNX11-212ENST00000583320 A0A0U1RRA0 63 aa11.51□□□□□ -0.57
SNX11-212ENST00000583320 LECT2O14960 151 aa11.51□□□□□ -0.57
SNX11-212ENST00000583320 FXYD2P54710 66 aa11.51□□□□□ -0.57
SNX11-212ENST00000583320 WFDC2Q14508 124 aa11.51□□□□□ -0.57
SNX11-212ENST00000583320 ARL17AQ8IVW1 177 aa11.51□□□□□ -0.57
SNX11-212ENST00000583320 A6NDN8 102 aa11.5□□□□□ -0.57
SNX11-212ENST00000583320 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
SNX11-212ENST00000583320 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
SNX11-212ENST00000583320 DAND5Q8N907 189 aa11.5□□□□□ -0.57
SNX11-212ENST00000583320 SLPIP03973 132 aa11.49□□□□□ -0.57
SNX11-212ENST00000583320 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
SNX11-212ENST00000583320 LRP2P98164 4655 aa11.49□□□□□ -0.57
SNX11-212ENST00000583320 BATFQ16520 125 aa11.49□□□□□ -0.57
SNX11-212ENST00000583320 C9orf116Q5BN46 136 aaPredicted RBP11.49□□□□□ -0.57
SNX11-212ENST00000583320 OXTP01178 125 aa11.48□□□□□ -0.57
SNX11-212ENST00000583320 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
SNX11-212ENST00000583320 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
SNX11-212ENST00000583320 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
SNX11-212ENST00000583320 A0A1B0GWB2 263 aa11.46□□□□□ -0.57
SNX11-212ENST00000583320 A4D1N5 150 aa11.46□□□□□ -0.57
SNX11-212ENST00000583320 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.57
SNX11-212ENST00000583320 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
SNX11-212ENST00000583320 SND1-IT1Q9HBX3 110 aa11.45□□□□□ -0.58
SNX11-212ENST00000583320 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
SNX11-212ENST00000583320 NPC2P61916 151 aa11.44□□□□□ -0.58
SNX11-212ENST00000583320 NHP2Q9NX24 153 aaKnown RBP11.44□□□□□ -0.58
SNX11-212ENST00000583320 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
SNX11-212ENST00000583320 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
SNX11-212ENST00000583320 LINC01620Q4KN68 170 aa11.43□□□□□ -0.58
SNX11-212ENST00000583320 NDUFC2O95298 119 aa11.42□□□□□ -0.58
SNX11-212ENST00000583320 LOC107984640A0A0U1RRK4 108 aa11.41□□□□□ -0.58
SNX11-212ENST00000583320 CFC1BP0CG36 223 aa11.41□□□□□ -0.58
SNX11-212ENST00000583320 CFC1P0CG37 223 aa11.41□□□□□ -0.58
SNX11-212ENST00000583320 C9orf163Q8N9P6 203 aa11.4□□□□□ -0.58
SNX11-212ENST00000583320 Q6ZRP5 223 aa11.39□□□□□ -0.59
SNX11-212ENST00000583320 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.38□□□□□ -0.59
SNX11-212ENST00000583320 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
SNX11-212ENST00000583320 PRO1854Q9UHT4 67 aa11.37□□□□□ -0.59
SNX11-212ENST00000583320 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
SNX11-212ENST00000583320 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 K7ERJ3 54 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 MT1HL1P0DM35 61 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 XAGE1AQ9HD64 81 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 TNXBP22105 4242 aa11.35□□□□□ -0.59
SNX11-212ENST00000583320 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
SNX11-212ENST00000583320 CIRBP-AS1Q8TBR5 109 aa11.34□□□□□ -0.59
SNX11-212ENST00000583320 IGKV2-28A0A075B6P5 120 aa11.33□□□□□ -0.6
SNX11-212ENST00000583320 IGKV2D-28P01615 120 aa11.33□□□□□ -0.6
SNX11-212ENST00000583320 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
SNX11-212ENST00000583320 C9orf118A6NHY6 69 aa11.32□□□□□ -0.6
SNX11-212ENST00000583320 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
SNX11-212ENST00000583320 VPREB1P12018 145 aa11.3□□□□□ -0.6
SNX11-212ENST00000583320 SDIM1Q6ZPB5 146 aa11.3□□□□□ -0.6
SNX11-212ENST00000583320 LINC00337Q8N6G1 96 aa11.3□□□□□ -0.6
SNX11-212ENST00000583320 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
SNX11-212ENST00000583320 RPL13AP40429 203 aaKnown RBP11.29□□□□□ -0.6
SNX11-212ENST00000583320 Q8NDZ9 215 aa11.29□□□□□ -0.6
SNX11-212ENST00000583320 LINC00474Q9P2X8 69 aa11.29□□□□□ -0.6
SNX11-212ENST00000583320 A0A096LNI7 61 aa11.28□□□□□ -0.6
SNX11-212ENST00000583320 TSPAN13O95857 204 aa11.28□□□□□ -0.6
SNX11-212ENST00000583320 M0R378 163 aa11.27□□□□□ -0.61
SNX11-212ENST00000583320 TMEM126AQ9H061 195 aa11.27□□□□□ -0.61
SNX11-212ENST00000583320 RPL37AP61513 92 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms