RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 HERC1Q15751 4861 aa5.31□□□□□ -1.56
TVP23C-208ENST00000581273 TRAV23DV6A0A075B6W5 121 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 IGHV3OR16-12A0A075B7B8 117 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 A0A087WVE0 104 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 A8MZ25 164 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 H7BZZ5 65 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 K7EIL1 84 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 UBE2L6O14933 153 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 LINC00158P58513 81 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 CXCL6P80162 114 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 SPINK13Q1W4C9 94 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 DYNLRB2Q8TF09 96 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
TVP23C-208ENST00000581273 IGKV3-7A0A075B6H7 116 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 LOC110117498A0A087WWA1 95 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 A0A087WYN8 130 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 A8MTW9 85 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 RBM3P98179 157 aaKnown RBP5.29□□□□□ -1.56
TVP23C-208ENST00000581273 CFHR3Q02985 330 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 RNASE13Q5GAN3 156 aaKnown RBP5.29□□□□□ -1.56
TVP23C-208ENST00000581273 ENHOQ6UWT2 76 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 LINC00336Q6ZUF6 198 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 MUC7Q8TAX7 377 aa5.29□□□□□ -1.56
TVP23C-208ENST00000581273 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 TRBV6-4A0A1B0GX49 114 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 K7EQD1 137 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 NCR3O14931 201 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 PAX4O43316 350 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 HOXD3P31249 432 aaPredicted RBP5.28□□□□□ -1.56
TVP23C-208ENST00000581273 DEFB1P60022 68 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 SEC61GP60059 68 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 LINC00337Q8N6G1 96 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 LINC00482Q8N8I6 264 aa5.28□□□□□ -1.56
TVP23C-208ENST00000581273 C11orf68Q9H3H3 251 aaKnown RBP5.28□□□□□ -1.56
TVP23C-208ENST00000581273 INSP01308 110 aa5.27□□□□□ -1.57
TVP23C-208ENST00000581273 IGHV3-11P01762 117 aa5.27□□□□□ -1.57
TVP23C-208ENST00000581273 RPL35AP18077 110 aaKnown RBP5.27□□□□□ -1.57
TVP23C-208ENST00000581273 COX6A2Q02221 97 aa5.27□□□□□ -1.57
TVP23C-208ENST00000581273 CDC42SE2Q9NRR3 84 aa5.27□□□□□ -1.57
TVP23C-208ENST00000581273 IGKV2-28A0A075B6P5 120 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 IGHV3-73A0A0B4J1V6 119 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 TRBV7-6A0A0J9YX20 115 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 A6NDX4 124 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 IGKV2D-28P01615 120 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 CCL18P55774 89 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 KRTAP10-11P60412 298 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 Q8N814 137 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 ZNF702PQ9H963 129 aa5.26□□□□□ -1.57
TVP23C-208ENST00000581273 IGKV3-20P01619 116 aa5.25□□□□□ -1.57
TVP23C-208ENST00000581273 MIFP14174 115 aa5.25□□□□□ -1.57
TVP23C-208ENST00000581273 KHDC1LQ5JSQ8 128 aa5.25□□□□□ -1.57
TVP23C-208ENST00000581273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
TVP23C-208ENST00000581273 MUC4Q99102 2169 aa5.25□□□□□ -1.57
TVP23C-208ENST00000581273 SORL1Q92673 2214 aa5.24□□□□□ -1.57
TVP23C-208ENST00000581273 F8WEM9 126 aa5.24□□□□□ -1.57
TVP23C-208ENST00000581273 COX17Q14061 63 aa5.24□□□□□ -1.57
TVP23C-208ENST00000581273 FAM19A1Q7Z5A9 133 aa5.24□□□□□ -1.57
TVP23C-208ENST00000581273 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
TVP23C-208ENST00000581273 A0A087WZ39 114 aa5.23□□□□□ -1.57
TVP23C-208ENST00000581273 C9orf66Q5T8R8 295 aa5.23□□□□□ -1.57
TVP23C-208ENST00000581273 C6orf223Q8N319 242 aa5.23□□□□□ -1.57
TVP23C-208ENST00000581273 WFDC9Q8NEX5 89 aa5.23□□□□□ -1.57
TVP23C-208ENST00000581273 B9D2Q9BPU9 175 aa5.23□□□□□ -1.57
TVP23C-208ENST00000581273 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
TVP23C-208ENST00000581273 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
TVP23C-208ENST00000581273 IGHV3-38A0A0C4DH36 116 aa5.22□□□□□ -1.57
TVP23C-208ENST00000581273 PLAC8L1A1L4L8 177 aa5.22□□□□□ -1.57
TVP23C-208ENST00000581273 CMC4P56277 68 aaPredicted RBP5.22□□□□□ -1.57
TVP23C-208ENST00000581273 LINC01547P58512 204 aaPredicted RBP5.22□□□□□ -1.57
TVP23C-208ENST00000581273 Q6ZQT0 140 aa5.22□□□□□ -1.57
TVP23C-208ENST00000581273 FP248Q71RG6 208 aaPredicted RBP5.22□□□□□ -1.57
TVP23C-208ENST00000581273 C1orf158Q8N1D5 194 aa5.22□□□□□ -1.57
TVP23C-208ENST00000581273 TOMM7Q9P0U1 55 aa5.22□□□□□ -1.57
TVP23C-208ENST00000581273 PLA2G2DQ9UNK4 145 aa5.22□□□□□ -1.57
TVP23C-208ENST00000581273 HTN1P15515 57 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 HAMPP81172 84 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 ESRGQ1W209 222 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 C6orf226Q5I0X4 101 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 C10orf99Q6UWK7 81 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 Q8IZM0 81 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 C11orf72Q8NBR9 251 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.58
TVP23C-208ENST00000581273 FUSP35637 526 aaKnown RBP eCLIP5.2□□□□□ -1.588e-7■■□□□ 12.2
TVP23C-208ENST00000581273 DEFB131AP59861 70 aa5.2□□□□□ -1.58
TVP23C-208ENST00000581273 SS18Q15532 418 aa5.2□□□□□ -1.58
TVP23C-208ENST00000581273 C9orf129Q5T035 196 aaKnown RBP5.2□□□□□ -1.58
TVP23C-208ENST00000581273 NTM-AS1Q6ZSK4 140 aa5.2□□□□□ -1.58
TVP23C-208ENST00000581273 Q6ZSN1 163 aa5.2□□□□□ -1.58
TVP23C-208ENST00000581273 Q6ZVQ6 151 aa5.2□□□□□ -1.58
TVP23C-208ENST00000581273 PRR15Q8IV56 129 aa5.2□□□□□ -1.58
TVP23C-208ENST00000581273 HUWE1Q7Z6Z7 4374 aaKnown RBP5.19□□□□□ -1.58
TVP23C-208ENST00000581273 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
TVP23C-208ENST00000581273 LYRM9A8MSI8 78 aa5.19□□□□□ -1.58
TVP23C-208ENST00000581273 SLPIP03973 132 aa5.19□□□□□ -1.58
TVP23C-208ENST00000581273 EGFEM1PQ0D2K5 195 aa5.19□□□□□ -1.58
TVP23C-208ENST00000581273 NREPQ16612 68 aa5.19□□□□□ -1.58
TVP23C-208ENST00000581273 LINC00575Q6W349 94 aa5.19□□□□□ -1.58
TVP23C-208ENST00000581273 TMEM254Q8TBM7 123 aa5.19□□□□□ -1.58
TVP23C-208ENST00000581273 IGHV3OR16-9A0A0B4J2B5 98 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms