RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 MTURNQ8N3F0 131 aa9.73□□□□□ -0.85
CDK5RAP3-218ENST00000580391 PRR3P79522 188 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-218ENST00000580391 WFDC2Q14508 124 aa9.72□□□□□ -0.85
CDK5RAP3-218ENST00000580391 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
CDK5RAP3-218ENST00000580391 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
CDK5RAP3-218ENST00000580391 SLPIP03973 132 aa9.72□□□□□ -0.85
CDK5RAP3-218ENST00000580391 F8WDY8 70 aa9.71□□□□□ -0.86
CDK5RAP3-218ENST00000580391 NDUFC2O95298 119 aa9.71□□□□□ -0.86
CDK5RAP3-218ENST00000580391 CARD19Q96LW7 228 aa9.71□□□□□ -0.86
CDK5RAP3-218ENST00000580391 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
CDK5RAP3-218ENST00000580391 NCR3O14931 201 aa9.7□□□□□ -0.86
CDK5RAP3-218ENST00000580391 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
CDK5RAP3-218ENST00000580391 TTC32Q5I0X7 151 aa9.7□□□□□ -0.86
CDK5RAP3-218ENST00000580391 OR13C6PQ8NH95 151 aa9.7□□□□□ -0.86
CDK5RAP3-218ENST00000580391 CLEC2BQ92478 149 aa9.69□□□□□ -0.86
CDK5RAP3-218ENST00000580391 PSCAO43653 123 aa9.68□□□□□ -0.86
CDK5RAP3-218ENST00000580391 COX6CP09669 75 aa9.68□□□□□ -0.86
CDK5RAP3-218ENST00000580391 Q6ZRP5 223 aa9.68□□□□□ -0.86
CDK5RAP3-218ENST00000580391 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
CDK5RAP3-218ENST00000580391 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
CDK5RAP3-218ENST00000580391 SMIM11BQ8TCY0 68 aa9.68□□□□□ -0.86
CDK5RAP3-218ENST00000580391 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
CDK5RAP3-218ENST00000580391 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
CDK5RAP3-218ENST00000580391 RPL28P46779 137 aaKnown RBP9.66□□□□□ -0.86
CDK5RAP3-218ENST00000580391 KMT2AQ03164 3969 aa9.66□□□□□ -0.86
CDK5RAP3-218ENST00000580391 ATXN8Q156A1 80 aa9.66□□□□□ -0.86
CDK5RAP3-218ENST00000580391 DNAH2Q9P225 4427 aa9.65□□□□□ -0.86
CDK5RAP3-218ENST00000580391 M0R2N4 97 aa9.65□□□□□ -0.86
CDK5RAP3-218ENST00000580391 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
CDK5RAP3-218ENST00000580391 VPS25Q9BRG1 176 aa9.64□□□□□ -0.87
CDK5RAP3-218ENST00000580391 LST1O00453 97 aa9.64□□□□□ -0.87
CDK5RAP3-218ENST00000580391 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
CDK5RAP3-218ENST00000580391 F8W1H4 67 aa9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 LINC01620Q4KN68 170 aa9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 C9orf129Q5T035 196 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 Q6ZRN7 208 aaPredicted RBP9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 WWC2-AS2Q96NR7 200 aa9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 C9JAW5 83 aa9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 TLX1NBP0CAT3 122 aa9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 VPREB1P12018 145 aa9.63□□□□□ -0.87
CDK5RAP3-218ENST00000580391 DNAH6Q9C0G6 4158 aa9.62□□□□□ -0.87
CDK5RAP3-218ENST00000580391 FAM218AQ96MZ4 157 aa9.62□□□□□ -0.87
CDK5RAP3-218ENST00000580391 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
CDK5RAP3-218ENST00000580391 ALMS1Q8TCU4 4167 aa9.62□□□□□ -0.87
CDK5RAP3-218ENST00000580391 OCIAD2Q56VL3 154 aa9.61□□□□□ -0.87
CDK5RAP3-218ENST00000580391 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
CDK5RAP3-218ENST00000580391 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
CDK5RAP3-218ENST00000580391 K7ERU9 68 aa9.61□□□□□ -0.87
CDK5RAP3-218ENST00000580391 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-218ENST00000580391 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
CDK5RAP3-218ENST00000580391 SLC25A20O43772 301 aa9.59□□□□□ -0.87
CDK5RAP3-218ENST00000580391 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
CDK5RAP3-218ENST00000580391 TRBV10-3A0A0K0K1G6 114 aa9.58□□□□□ -0.88
CDK5RAP3-218ENST00000580391 CNBPP62633 177 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-218ENST00000580391 ETDBQ3ZM63 59 aa9.58□□□□□ -0.88
CDK5RAP3-218ENST00000580391 GAGE2BQ13066 116 aa9.57□□□□□ -0.88
CDK5RAP3-218ENST00000580391 C14orf177Q52M58 125 aa9.57□□□□□ -0.88
CDK5RAP3-218ENST00000580391 SERTAD4-AS1Q5TG53 156 aa9.57□□□□□ -0.88
CDK5RAP3-218ENST00000580391 Q6ZR54 194 aa9.57□□□□□ -0.88
CDK5RAP3-218ENST00000580391 DNAH17Q9UFH2 4485 aa9.57□□□□□ -0.88
CDK5RAP3-218ENST00000580391 LOC107984640A0A0U1RRK4 108 aa9.57□□□□□ -0.88
CDK5RAP3-218ENST00000580391 A0A087WYN8 130 aa9.56□□□□□ -0.88
CDK5RAP3-218ENST00000580391 LY6G6CO95867 125 aa9.56□□□□□ -0.88
CDK5RAP3-218ENST00000580391 C6orf99Q4VX62 202 aa9.56□□□□□ -0.88
CDK5RAP3-218ENST00000580391 FAM168BA1KXE4 195 aa9.55□□□□□ -0.88
CDK5RAP3-218ENST00000580391 M0R378 163 aa9.55□□□□□ -0.88
CDK5RAP3-218ENST00000580391 LINC00476Q8WZB0 136 aa9.55□□□□□ -0.88
CDK5RAP3-218ENST00000580391 H0YGX0 51 aa9.54□□□□□ -0.88
CDK5RAP3-218ENST00000580391 TRACP01848 142 aa9.54□□□□□ -0.88
CDK5RAP3-218ENST00000580391 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
CDK5RAP3-218ENST00000580391 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
CDK5RAP3-218ENST00000580391 NKAPP1Q8N9T2 125 aa9.53□□□□□ -0.88
CDK5RAP3-218ENST00000580391 A0A096LNI7 61 aa9.52□□□□□ -0.89
CDK5RAP3-218ENST00000580391 KRTAP7-1Q8IUC3 87 aa9.52□□□□□ -0.89
CDK5RAP3-218ENST00000580391 PLA2G2DQ9UNK4 145 aa9.52□□□□□ -0.89
CDK5RAP3-218ENST00000580391 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.89
CDK5RAP3-218ENST00000580391 H3BT86 120 aa9.52□□□□□ -0.89
CDK5RAP3-218ENST00000580391 M0QXV9 152 aa9.51□□□□□ -0.89
CDK5RAP3-218ENST00000580391 TEN1Q86WV5 123 aa9.51□□□□□ -0.89
CDK5RAP3-218ENST00000580391 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
CDK5RAP3-218ENST00000580391 IGKV2-24A0A0C4DH68 120 aa9.5□□□□□ -0.89
CDK5RAP3-218ENST00000580391 FAM19A5Q7Z5A7 132 aaPredicted RBP9.5□□□□□ -0.89
CDK5RAP3-218ENST00000580391 Q8N814 137 aa9.5□□□□□ -0.89
CDK5RAP3-218ENST00000580391 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
CDK5RAP3-218ENST00000580391 LINC01600Q96MT4 127 aa9.5□□□□□ -0.89
CDK5RAP3-218ENST00000580391 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
CDK5RAP3-218ENST00000580391 A0A087WTM6 91 aa9.49□□□□□ -0.89
CDK5RAP3-218ENST00000580391 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
CDK5RAP3-218ENST00000580391 C3orf84H3BNL1 204 aa9.49□□□□□ -0.89
CDK5RAP3-218ENST00000580391 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
CDK5RAP3-218ENST00000580391 FRAS1Q86XX4 4008 aa9.48□□□□□ -0.89
CDK5RAP3-218ENST00000580391 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-218ENST00000580391 DNAL4O96015 105 aa9.48□□□□□ -0.89
CDK5RAP3-218ENST00000580391 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
CDK5RAP3-218ENST00000580391 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
CDK5RAP3-218ENST00000580391 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
CDK5RAP3-218ENST00000580391 C22orf24Q9Y442 160 aa9.46□□□□□ -0.89
CDK5RAP3-218ENST00000580391 SACSQ9NZJ4 4579 aa9.45□□□□□ -0.9
CDK5RAP3-218ENST00000580391 BAALC-AS2P0C853 105 aa9.45□□□□□ -0.9
CDK5RAP3-218ENST00000580391 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms