RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 FABP4P15090 132 aa8.16□□□□□ -1.1
GGA3-208ENST00000579743 PFN2P35080 140 aa8.16□□□□□ -1.1
GGA3-208ENST00000579743 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
GGA3-208ENST00000579743 C12orf57Q99622 126 aa8.16□□□□□ -1.1
GGA3-208ENST00000579743 TSPAN13O95857 204 aa8.15□□□□□ -1.1
GGA3-208ENST00000579743 COX17Q14061 63 aa8.15□□□□□ -1.1
GGA3-208ENST00000579743 LINC00614P0C842 121 aa8.14□□□□□ -1.11
GGA3-208ENST00000579743 IGLC3P0DOY3 106 aa8.14□□□□□ -1.11
GGA3-208ENST00000579743 PYY3Q5JQD4 70 aa8.14□□□□□ -1.11
GGA3-208ENST00000579743 HBDP02042 147 aa8.13□□□□□ -1.11
GGA3-208ENST00000579743 BAGE3Q86Y29 109 aa8.13□□□□□ -1.11
GGA3-208ENST00000579743 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
GGA3-208ENST00000579743 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
GGA3-208ENST00000579743 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
GGA3-208ENST00000579743 IGKV2D-26A0A0A0MRZ7 120 aa8.11□□□□□ -1.11
GGA3-208ENST00000579743 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
GGA3-208ENST00000579743 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
GGA3-208ENST00000579743 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
GGA3-208ENST00000579743 TMEM170BQ5T4T1 132 aa8.11□□□□□ -1.11
GGA3-208ENST00000579743 URB1-AS1Q96HZ7 61 aa8.11□□□□□ -1.11
GGA3-208ENST00000579743 A0A087X002 238 aa8.1□□□□□ -1.11
GGA3-208ENST00000579743 ZNF22P17026 224 aaPredicted RBP8.1□□□□□ -1.11
GGA3-208ENST00000579743 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
GGA3-208ENST00000579743 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
GGA3-208ENST00000579743 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
GGA3-208ENST00000579743 RNF213Q63HN8 5207 aa8.09□□□□□ -1.11
GGA3-208ENST00000579743 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
GGA3-208ENST00000579743 ZNF625Q96I27 306 aaPredicted RBP8.08□□□□□ -1.12
GGA3-208ENST00000579743 HSBP1O75506 76 aa8.07□□□□□ -1.12
GGA3-208ENST00000579743 VPREB1P12018 145 aa8.07□□□□□ -1.12
GGA3-208ENST00000579743 CTAG1AP78358 180 aa8.07□□□□□ -1.12
GGA3-208ENST00000579743 LINC00304Q8N9R0 145 aa8.07□□□□□ -1.12
GGA3-208ENST00000579743 TMEM126AQ9H061 195 aa8.07□□□□□ -1.12
GGA3-208ENST00000579743 A0A096LNJ9 63 aa8.06□□□□□ -1.12
GGA3-208ENST00000579743 LINC00158P58513 81 aa8.06□□□□□ -1.12
GGA3-208ENST00000579743 KRTAP13-1Q8IUC0 172 aa8.06□□□□□ -1.12
GGA3-208ENST00000579743 ANAPC11Q9NYG5 84 aa8.06□□□□□ -1.12
GGA3-208ENST00000579743 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
GGA3-208ENST00000579743 C11orf86A6NJI1 115 aa8.05□□□□□ -1.12
GGA3-208ENST00000579743 PRLHP81277 87 aa8.05□□□□□ -1.12
GGA3-208ENST00000579743 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
GGA3-208ENST00000579743 LINC00587B1AMM8 73 aa8.04□□□□□ -1.12
GGA3-208ENST00000579743 FAM19A2Q8N3H0 131 aa8.04□□□□□ -1.12
GGA3-208ENST00000579743 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
GGA3-208ENST00000579743 S100A12P80511 92 aa8.03□□□□□ -1.12
GGA3-208ENST00000579743 M0R378 163 aa8.02□□□□□ -1.13
GGA3-208ENST00000579743 KRTAP13-2Q52LG2 175 aa8.02□□□□□ -1.13
GGA3-208ENST00000579743 HIGD2AQ9BW72 106 aa8.02□□□□□ -1.13
GGA3-208ENST00000579743 ZNF706Q9Y5V0 76 aaPredicted RBP8.02□□□□□ -1.13
GGA3-208ENST00000579743 TRAV12-1A0A0B4J245 112 aa8.01□□□□□ -1.13
GGA3-208ENST00000579743 C3orf79P0CE67 100 aa8.01□□□□□ -1.13
GGA3-208ENST00000579743 HERV-K104P63124 156 aa8.01□□□□□ -1.13
GGA3-208ENST00000579743 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
GGA3-208ENST00000579743 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
GGA3-208ENST00000579743 KRTDAPP60985 99 aa8□□□□□ -1.13
GGA3-208ENST00000579743 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
GGA3-208ENST00000579743 SPAG11AQ6PDA7 123 aa8□□□□□ -1.13
GGA3-208ENST00000579743 PLEKHB2Q96CS7 222 aa8□□□□□ -1.13
GGA3-208ENST00000579743 MAP1LC3CQ9BXW4 147 aa8□□□□□ -1.13
GGA3-208ENST00000579743 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
GGA3-208ENST00000579743 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
GGA3-208ENST00000579743 CDIP1Q9H305 208 aa7.99□□□□□ -1.13
GGA3-208ENST00000579743 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
GGA3-208ENST00000579743 SCGB1D1O95968 90 aa7.98□□□□□ -1.13
GGA3-208ENST00000579743 BOD1L2Q8IYS8 172 aa7.98□□□□□ -1.13
GGA3-208ENST00000579743 LPAP08519 4548 aa7.97□□□□□ -1.13
GGA3-208ENST00000579743 PRYO14603 147 aa7.97□□□□□ -1.13
GGA3-208ENST00000579743 LEPROTL1O95214 131 aa7.97□□□□□ -1.13
GGA3-208ENST00000579743 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
GGA3-208ENST00000579743 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.14
GGA3-208ENST00000579743 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
GGA3-208ENST00000579743 SMIM13P0DJ93 91 aa7.96□□□□□ -1.14
GGA3-208ENST00000579743 HSPB8Q9UJY1 196 aa7.96□□□□□ -1.14
GGA3-208ENST00000579743 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
GGA3-208ENST00000579743 SYS1-DBNDD2H3BUS1 97 aa7.95□□□□□ -1.14
GGA3-208ENST00000579743 TPRXLQ17RH7 258 aa7.95□□□□□ -1.14
GGA3-208ENST00000579743 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
GGA3-208ENST00000579743 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
GGA3-208ENST00000579743 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
GGA3-208ENST00000579743 SPRR4Q96PI1 79 aa7.94□□□□□ -1.14
GGA3-208ENST00000579743 NDUFA12Q9UI09 145 aa7.94□□□□□ -1.14
GGA3-208ENST00000579743 C20orf202A1L168 122 aa7.93□□□□□ -1.14
GGA3-208ENST00000579743 H0Y8G0 127 aa7.93□□□□□ -1.14
GGA3-208ENST00000579743 NCR3O14931 201 aa7.93□□□□□ -1.14
GGA3-208ENST00000579743 PET117Q6UWS5 81 aa7.93□□□□□ -1.14
GGA3-208ENST00000579743 Q8NDZ9 215 aa7.93□□□□□ -1.14
GGA3-208ENST00000579743 VAMP8Q9BV40 100 aa7.93□□□□□ -1.14
GGA3-208ENST00000579743 KCNQ1DNQ9H478 68 aa7.93□□□□□ -1.14
GGA3-208ENST00000579743 LINC01545Q5VT33 79 aa7.92□□□□□ -1.14
GGA3-208ENST00000579743 C3orf22Q8N5N4 141 aa7.92□□□□□ -1.14
GGA3-208ENST00000579743 MIEN1Q9BRT3 115 aa7.92□□□□□ -1.14
GGA3-208ENST00000579743 PRO1933Q9H354 126 aa7.92□□□□□ -1.14
GGA3-208ENST00000579743 PLNP26678 52 aa7.91□□□□□ -1.14
GGA3-208ENST00000579743 HERVK_113P61574 105 aa7.91□□□□□ -1.14
GGA3-208ENST00000579743 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
GGA3-208ENST00000579743 DDTP30046 118 aa7.9□□□□□ -1.14
GGA3-208ENST00000579743 SMCR5Q8TEV8 140 aa7.9□□□□□ -1.14
GGA3-208ENST00000579743 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
GGA3-208ENST00000579743 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
GGA3-208ENST00000579743 TRBV10-3A0A0K0K1G6 114 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms