RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 TSPAN13O95857 204 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 PMVKQ15126 192 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 PYY3Q5JQD4 70 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 NKAPP1Q8N9T2 125 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 URB1-AS1Q96HZ7 61 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 LINC00167Q96N53 147 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 C12orf57Q99622 126 aa5.49□□□□□ -1.53
CDK5RAP3-211ENST00000578996 IGLV5-45A0A087WSX0 123 aa5.48□□□□□ -1.53
CDK5RAP3-211ENST00000578996 H3BRM9 83 aa5.48□□□□□ -1.53
CDK5RAP3-211ENST00000578996 ATP5LO75964 103 aa5.48□□□□□ -1.53
CDK5RAP3-211ENST00000578996 IGKV2-28A0A075B6P5 120 aa5.47□□□□□ -1.53
CDK5RAP3-211ENST00000578996 A0A087X002 238 aa5.47□□□□□ -1.53
CDK5RAP3-211ENST00000578996 IGKV2D-28P01615 120 aa5.47□□□□□ -1.53
CDK5RAP3-211ENST00000578996 PFN2P35080 140 aa5.47□□□□□ -1.53
CDK5RAP3-211ENST00000578996 UBE2AP49459 152 aa5.47□□□□□ -1.53
CDK5RAP3-211ENST00000578996 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
CDK5RAP3-211ENST00000578996 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.54
CDK5RAP3-211ENST00000578996 CRYGAP11844 174 aa5.45□□□□□ -1.54
CDK5RAP3-211ENST00000578996 PMCHL1Q16048 86 aa5.45□□□□□ -1.54
CDK5RAP3-211ENST00000578996 HSPB8Q9UJY1 196 aa5.45□□□□□ -1.54
CDK5RAP3-211ENST00000578996 IGLV5-37A0A075B6J1 123 aa5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 LEPROTL1O95214 131 aa5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 HBDP02042 147 aa5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 IGLC3P0DOY3 106 aa5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 ZNF22P17026 224 aaPredicted RBP5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 S100A12P80511 92 aa5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 FAM19A2Q8N3H0 131 aa5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 ZNF625Q96I27 306 aaPredicted RBP5.44□□□□□ -1.54
CDK5RAP3-211ENST00000578996 A0A096LNJ9 63 aa5.43□□□□□ -1.54
CDK5RAP3-211ENST00000578996 C3orf79P0CE67 100 aa5.43□□□□□ -1.54
CDK5RAP3-211ENST00000578996 PRLHP81277 87 aa5.43□□□□□ -1.54
CDK5RAP3-211ENST00000578996 TMEM170BQ5T4T1 132 aa5.43□□□□□ -1.54
CDK5RAP3-211ENST00000578996 PET117Q6UWS5 81 aa5.43□□□□□ -1.54
CDK5RAP3-211ENST00000578996 FAM19A1Q7Z5A9 133 aa5.43□□□□□ -1.54
CDK5RAP3-211ENST00000578996 ERG28Q9UKR5 140 aa5.43□□□□□ -1.54
CDK5RAP3-211ENST00000578996 IGLV5-39A0A0G2JS06 123 aa5.42□□□□□ -1.54
CDK5RAP3-211ENST00000578996 MAP1LC3CQ9BXW4 147 aa5.42□□□□□ -1.54
CDK5RAP3-211ENST00000578996 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
CDK5RAP3-211ENST00000578996 C20orf202A1L168 122 aa5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 TMEM238C9JI98 176 aa5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 SYS1-DBNDD2H3BUS1 97 aa5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 VPREB1P12018 145 aa5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 KRTDAPP60985 99 aa5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 RPL24P83731 157 aaKnown RBP5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 KRTAP13-1Q8IUC0 172 aa5.41□□□□□ -1.54
CDK5RAP3-211ENST00000578996 MUC2Q02817 5179 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 IGKV2D-26A0A0A0MRZ7 120 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 A0A0U1RRA0 63 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 C11orf86A6NJI1 115 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 COX17Q14061 63 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 LINC01545Q5VT33 79 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 TMEM126AQ9H061 195 aa5.4□□□□□ -1.54
CDK5RAP3-211ENST00000578996 LINC00158P58513 81 aa5.39□□□□□ -1.55
CDK5RAP3-211ENST00000578996 LINC00304Q8N9R0 145 aa5.39□□□□□ -1.55
CDK5RAP3-211ENST00000578996 IFI27L1Q96BM0 104 aa5.39□□□□□ -1.55
CDK5RAP3-211ENST00000578996 CHTOPQ9Y3Y2 248 aaKnown RBP5.39□□□□□ -1.55
CDK5RAP3-211ENST00000578996 TSTD3H0UI37 97 aa5.38□□□□□ -1.55
CDK5RAP3-211ENST00000578996 FAM229BQ4G0N7 80 aa5.38□□□□□ -1.55
CDK5RAP3-211ENST00000578996 SFTA2Q6UW10 78 aa5.38□□□□□ -1.55
CDK5RAP3-211ENST00000578996 Q8NDZ9 215 aa5.38□□□□□ -1.55
CDK5RAP3-211ENST00000578996 HIGD2AQ9BW72 106 aa5.38□□□□□ -1.55
CDK5RAP3-211ENST00000578996 TRAV12-1A0A0B4J245 112 aa5.37□□□□□ -1.55
CDK5RAP3-211ENST00000578996 M0R378 163 aa5.37□□□□□ -1.55
CDK5RAP3-211ENST00000578996 VAMP8Q9BV40 100 aa5.37□□□□□ -1.55
CDK5RAP3-211ENST00000578996 MEIG1Q5JSS6 88 aa5.36□□□□□ -1.55
CDK5RAP3-211ENST00000578996 A0A0U1RQV1 116 aa5.35□□□□□ -1.55
CDK5RAP3-211ENST00000578996 TMEM223A0PJW6 202 aa5.35□□□□□ -1.55
CDK5RAP3-211ENST00000578996 H0Y8G0 127 aa5.35□□□□□ -1.55
CDK5RAP3-211ENST00000578996 NCR3O14931 201 aa5.35□□□□□ -1.55
CDK5RAP3-211ENST00000578996 SMIM13P0DJ93 91 aa5.35□□□□□ -1.55
CDK5RAP3-211ENST00000578996 C3orf22Q8N5N4 141 aa5.35□□□□□ -1.55
CDK5RAP3-211ENST00000578996 PLEKHB2Q96CS7 222 aa5.35□□□□□ -1.55
CDK5RAP3-211ENST00000578996 CDIP1Q9H305 208 aa5.34□□□□□ -1.55
CDK5RAP3-211ENST00000578996 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
CDK5RAP3-211ENST00000578996 PLNP26678 52 aa5.33□□□□□ -1.56
CDK5RAP3-211ENST00000578996 DDTP30046 118 aa5.33□□□□□ -1.56
CDK5RAP3-211ENST00000578996 SPATA45Q537H7 98 aa5.33□□□□□ -1.56
CDK5RAP3-211ENST00000578996 BOD1L2Q8IYS8 172 aa5.33□□□□□ -1.56
CDK5RAP3-211ENST00000578996 MIR7-3HGQ8N6C7 128 aa5.33□□□□□ -1.56
CDK5RAP3-211ENST00000578996 MIEN1Q9BRT3 115 aa5.33□□□□□ -1.56
CDK5RAP3-211ENST00000578996 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
CDK5RAP3-211ENST00000578996 DPM2O94777 84 aa5.32□□□□□ -1.56
CDK5RAP3-211ENST00000578996 PAM16Q9Y3D7 125 aa5.32□□□□□ -1.56
CDK5RAP3-211ENST00000578996 ETDCA0A1B0GVM5 59 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 PCP4L1A6NKN8 68 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 PRYO14603 147 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 IGKCP01834 107 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 HERV-K104P63124 156 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 PPDPFQ9H3Y8 114 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 UQCR10Q9UDW1 63 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 NDUFA12Q9UI09 145 aa5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 ZNF706Q9Y5V0 76 aaPredicted RBP5.31□□□□□ -1.56
CDK5RAP3-211ENST00000578996 DLEU1O43261 78 aa5.3□□□□□ -1.56
CDK5RAP3-211ENST00000578996 C4orf48Q5BLP8 95 aa5.3□□□□□ -1.56
CDK5RAP3-211ENST00000578996 ATOH7Q8N100 152 aa5.3□□□□□ -1.56
CDK5RAP3-211ENST00000578996 PMCHL2Q9BQD1 86 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms