RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
CDK5RAP3-206ENST00000578018 SYS1-DBNDD2H3BUS1 97 aa9.9□□□□□ -0.82
CDK5RAP3-206ENST00000578018 PLNP26678 52 aa9.9□□□□□ -0.82
CDK5RAP3-206ENST00000578018 H0Y8G0 127 aa9.89□□□□□ -0.83
CDK5RAP3-206ENST00000578018 BCE1O60756 84 aa9.88□□□□□ -0.83
CDK5RAP3-206ENST00000578018 DPM2O94777 84 aa9.88□□□□□ -0.83
CDK5RAP3-206ENST00000578018 PET117Q6UWS5 81 aa9.88□□□□□ -0.83
CDK5RAP3-206ENST00000578018 IGKCP01834 107 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 C3orf79P0CE67 100 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 RPL28P46779 137 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 SFTA2Q6UW10 78 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 HIST3H2BBQ8N257 126 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
CDK5RAP3-206ENST00000578018 A0A087X002 238 aa9.85□□□□□ -0.83
CDK5RAP3-206ENST00000578018 S100A6P06703 90 aa9.85□□□□□ -0.83
CDK5RAP3-206ENST00000578018 PRR4Q16378 134 aa9.85□□□□□ -0.83
CDK5RAP3-206ENST00000578018 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
CDK5RAP3-206ENST00000578018 RPL37AP8A6NKH3 93 aa9.84□□□□□ -0.83
CDK5RAP3-206ENST00000578018 PMCHL2Q9BQD1 86 aa9.84□□□□□ -0.83
CDK5RAP3-206ENST00000578018 GAGE10A6NGK3 116 aa9.83□□□□□ -0.84
CDK5RAP3-206ENST00000578018 ZNF625Q96I27 306 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-206ENST00000578018 HIST1H2BLQ99880 126 aa9.82□□□□□ -0.84
CDK5RAP3-206ENST00000578018 C5orf52A6NGY3 159 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 LEPROTO15243 131 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 S100A2P29034 98 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 KRTDAPP60985 99 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 KRTAP13-1Q8IUC0 172 aa9.81□□□□□ -0.84
CDK5RAP3-206ENST00000578018 TSPAN13O95857 204 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 CRYGAP11844 174 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 HERVK_113P61574 105 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 SNRPEP62304 92 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 COX17Q14061 63 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 PLEKHB2Q96CS7 222 aa9.8□□□□□ -0.84
CDK5RAP3-206ENST00000578018 MUC2Q02817 5179 aa9.79□□□□□ -0.84
CDK5RAP3-206ENST00000578018 AKR1D1P51857 326 aa9.79□□□□□ -0.84
CDK5RAP3-206ENST00000578018 C20orf202A1L168 122 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 E9PLD3 99 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 TYMSOSQ8TAI1 123 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 ERG28Q9UKR5 140 aa9.78□□□□□ -0.84
CDK5RAP3-206ENST00000578018 UBE2AP49459 152 aa9.77□□□□□ -0.85
CDK5RAP3-206ENST00000578018 HERV-K104P63124 156 aa9.77□□□□□ -0.85
CDK5RAP3-206ENST00000578018 ANAPC11Q9NYG5 84 aa9.77□□□□□ -0.85
CDK5RAP3-206ENST00000578018 IGKV2-28A0A075B6P5 120 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 J3QQQ9 107 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 IGKV2D-28P01615 120 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 PFN2P35080 140 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 TSPEAR-AS2P59090 65 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
CDK5RAP3-206ENST00000578018 MYMXA0A1B0GTQ4 84 aa9.75□□□□□ -0.85
CDK5RAP3-206ENST00000578018 NMUP48645 174 aa9.75□□□□□ -0.85
CDK5RAP3-206ENST00000578018 KRTAP13-2Q52LG2 175 aa9.75□□□□□ -0.85
CDK5RAP3-206ENST00000578018 LINC00587B1AMM8 73 aa9.74□□□□□ -0.85
CDK5RAP3-206ENST00000578018 VPREB1P12018 145 aa9.74□□□□□ -0.85
CDK5RAP3-206ENST00000578018 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
CDK5RAP3-206ENST00000578018 FAM229BQ4G0N7 80 aa9.73□□□□□ -0.85
CDK5RAP3-206ENST00000578018 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-206ENST00000578018 PRLHP81277 87 aa9.72□□□□□ -0.85
CDK5RAP3-206ENST00000578018 Q8NDZ9 215 aa9.71□□□□□ -0.86
CDK5RAP3-206ENST00000578018 TMEM126AQ9H061 195 aa9.71□□□□□ -0.86
CDK5RAP3-206ENST00000578018 TMEM238C9JI98 176 aa9.7□□□□□ -0.86
CDK5RAP3-206ENST00000578018 LINC00158P58513 81 aa9.69□□□□□ -0.86
CDK5RAP3-206ENST00000578018 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-206ENST00000578018 FAM19A1Q7Z5A9 133 aa9.69□□□□□ -0.86
CDK5RAP3-206ENST00000578018 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 M0R378 163 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 LINC00304Q8N9R0 145 aa9.68□□□□□ -0.86
CDK5RAP3-206ENST00000578018 ATOH7Q8N100 152 aa9.67□□□□□ -0.86
CDK5RAP3-206ENST00000578018 LOC107984156A0A0G2JMH3 177 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 A0A0J9YXY3 114 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 ARL17AQ8IVW1 177 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 RETNLBQ9BQ08 111 aa9.65□□□□□ -0.86
CDK5RAP3-206ENST00000578018 A0A0U1RRA0 63 aa9.64□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TIMM17BO60830 172 aa9.63□□□□□ -0.87
CDK5RAP3-206ENST00000578018 ZNF815PA8K554 130 aa9.62□□□□□ -0.87
CDK5RAP3-206ENST00000578018 SCGB1D1O95968 90 aa9.62□□□□□ -0.87
CDK5RAP3-206ENST00000578018 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
CDK5RAP3-206ENST00000578018 HSBP1L1C9JCN9 74 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 CTAG1AP78358 180 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 ADAMTSL4-AS1Q5T5F5 129 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 C3orf22Q8N5N4 141 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 LITAFQ99732 161 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 HIGD2AQ9BW72 106 aa9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
CDK5RAP3-206ENST00000578018 JOSD1Q15040 202 aaPredicted RBP9.59□□□□□ -0.87
CDK5RAP3-206ENST00000578018 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
CDK5RAP3-206ENST00000578018 PCP2Q8IVA1 136 aa9.58□□□□□ -0.88
CDK5RAP3-206ENST00000578018 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
CDK5RAP3-206ENST00000578018 DAND5Q8N907 189 aa9.57□□□□□ -0.88
CDK5RAP3-206ENST00000578018 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
CDK5RAP3-206ENST00000578018 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
CDK5RAP3-206ENST00000578018 IGLV7-46A0A075B6I9 117 aa9.56□□□□□ -0.88
CDK5RAP3-206ENST00000578018 NDUFC2O95298 119 aa9.55□□□□□ -0.88
CDK5RAP3-206ENST00000578018 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms