RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.91
NF1-218ENST00000577967 IGHV6-1A0A0B4J1U7 121 aa3.09□□□□□ -1.91
NF1-218ENST00000577967 PRO0461Q9UI25 63 aa3.09□□□□□ -1.91
NF1-218ENST00000577967 UQCRQO14949 82 aa3.09□□□□□ -1.92
NF1-218ENST00000577967 FAM240AA0A1B0GVK7 77 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 SPEGQ15772 3267 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 TRIOO75962 3097 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 WWC2-AS2Q96NR7 200 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 SPG11Q96JI7 2443 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 A0A087WSZ3 146 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 APLNQ9ULZ1 77 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 ANKRD11Q6UB99 2663 aaPredicted RBP3.08□□□□□ -1.92
NF1-218ENST00000577967 EPM2AB3EWF7 344 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 Q6ZVQ6 151 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 IMUPQ9GZP8 106 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 CDIP1Q9H305 208 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 PRR34Q9NV39 138 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 TLN1Q9Y490 2541 aaKnown RBP3.08□□□□□ -1.92
NF1-218ENST00000577967 VPREB1P12018 145 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 TMEM258P61165 79 aa3.08□□□□□ -1.92
NF1-218ENST00000577967 C9orf129Q5T035 196 aaKnown RBP3.08□□□□□ -1.92
NF1-218ENST00000577967 ACACBO00763 2458 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 CSPG4Q6UVK1 2322 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 Q6ZRX8 168 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 ZNF462Q96JM2 2506 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 IGLV6-57P01721 117 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 Q8N9L7 120 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 TRBV7-6A0A0J9YX20 115 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 C5orf47Q569G3 176 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 SERP2Q8N6R1 65 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 FAM104AQ969W3 186 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 NAV2Q8IVL1 2488 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 ANKRD17O75179 2603 aaKnown RBP3.07□□□□□ -1.92
NF1-218ENST00000577967 WDFY4Q6ZS81 3184 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 LINC01547P58512 204 aaPredicted RBP3.07□□□□□ -1.92
NF1-218ENST00000577967 DMDP11532 3685 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 PTPN13Q12923 2485 aa3.07□□□□□ -1.92
NF1-218ENST00000577967 J3KT08 172 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 IGLV1-50A0A075B6I6 118 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 MOBPQ13875 183 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 FAM236DA0A1B0GTK5 79 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 FAM236CP0DP71 79 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 Q6Q795 121 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 COX7CP15954 63 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 PRR4Q16378 134 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 Q6ZQT0 140 aa3.06□□□□□ -1.92
NF1-218ENST00000577967 VPS13AQ96RL7 3174 aa3.05□□□□□ -1.92
NF1-218ENST00000577967 MPLKIPQ8TAP9 179 aa3.05□□□□□ -1.92
NF1-218ENST00000577967 CASC2Q6XLA1 102 aa3.05□□□□□ -1.92
NF1-218ENST00000577967 LINC00476Q8WZB0 136 aa3.05□□□□□ -1.92
NF1-218ENST00000577967 CEP295Q9C0D2 2601 aa3.05□□□□□ -1.92
NF1-218ENST00000577967 SORL1Q92673 2214 aa3.04□□□□□ -1.92
NF1-218ENST00000577967 BCE1O60756 84 aa3.04□□□□□ -1.92
NF1-218ENST00000577967 PKD1L2Q7Z442 2459 aa3.04□□□□□ -1.92
NF1-218ENST00000577967 HCG22E2RYF7 251 aa3.04□□□□□ -1.92
NF1-218ENST00000577967 RPL37AP61513 92 aaKnown RBP3.04□□□□□ -1.92
NF1-218ENST00000577967 LOC110117498A0A087WWA1 95 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 SMIM29Q86T20 159 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 SPTBN4Q9H254 2564 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 TRAV7A0A075B6U4 112 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 A0A087WTM6 91 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 A0A1W2PNN7 141 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 ABCA2Q9BZC7 2435 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 A0A0C4DFX4 3053 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 CXCL6P80162 114 aa3.03□□□□□ -1.92
NF1-218ENST00000577967 KCNQ1DNQ9H478 68 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 A0A0G2JQZ4 141 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 ASPMQ8IZT6 3477 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 SPACA4Q8TDM5 124 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 CHD8Q9HCK8 2581 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 MGAQ8IWI9 3026 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 TRBV7-7A0A0K0K1E9 115 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 WIPF1O43516 503 aa3.02□□□□□ -1.93
NF1-218ENST00000577967 TLX1NBP0CAT3 122 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 LINC00208Q96KT6 92 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 H0Y9P7 68 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 PCOTHQ58A44 107 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 LIMD2Q9BT23 127 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 CREBBPQ92793 2442 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 Q8NBF4 154 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 LINC00528Q8N1L1 170 aa3.01□□□□□ -1.93
NF1-218ENST00000577967 PLA2G2DQ9UNK4 145 aa3□□□□□ -1.93
NF1-218ENST00000577967 DOPEY1Q5JWR5 2465 aa3□□□□□ -1.93
NF1-218ENST00000577967 NDUFC1O43677 76 aa3□□□□□ -1.93
NF1-218ENST00000577967 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
NF1-218ENST00000577967 TYMSOSQ8TAI1 123 aa3□□□□□ -1.93
NF1-218ENST00000577967 CFAP54Q96N23 3096 aa3□□□□□ -1.93
NF1-218ENST00000577967 SEC61GP60059 68 aa3□□□□□ -1.93
NF1-218ENST00000577967 FAM229AH3BQW9 127 aa2.99□□□□□ -1.93
NF1-218ENST00000577967 SMR3BP02814 79 aaPredicted RBP2.99□□□□□ -1.93
NF1-218ENST00000577967 IGFL1Q6UW32 110 aa2.99□□□□□ -1.93
NF1-218ENST00000577967 Q8N377 158 aa2.99□□□□□ -1.93
NF1-218ENST00000577967 SONP18583 2426 aaKnown RBP2.99□□□□□ -1.93
NF1-218ENST00000577967 ERC2-IT1O76042 136 aa2.98□□□□□ -1.93
NF1-218ENST00000577967 ATP5EP56381 51 aaPredicted RBP2.98□□□□□ -1.93
NF1-218ENST00000577967 CNBPP62633 177 aaKnown RBP2.98□□□□□ -1.93
NF1-218ENST00000577967 NOTCH3Q9UM47 2321 aa2.98□□□□□ -1.93
NF1-218ENST00000577967 C9orf163Q8N9P6 203 aa2.98□□□□□ -1.93
NF1-218ENST00000577967 PIEZO1Q92508 2521 aa2.98□□□□□ -1.93
NF1-218ENST00000577967 hDV103S1A0JD37 113 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms