RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 HIST1H2BHQ93079 126 aa15.94■□□□□ 0.14
PPP4R1-204ENST00000577393 HIST1H2BNQ99877 126 aa15.94■□□□□ 0.14
PPP4R1-204ENST00000577393 HIST1H2BMQ99879 126 aa15.94■□□□□ 0.14
PPP4R1-204ENST00000577393 A0A0U1RRA0 63 aa15.92■□□□□ 0.14
PPP4R1-204ENST00000577393 BCE1O60756 84 aa15.92■□□□□ 0.14
PPP4R1-204ENST00000577393 PLNP26678 52 aa15.92■□□□□ 0.14
PPP4R1-204ENST00000577393 PMCHL2Q9BQD1 86 aa15.91■□□□□ 0.14
PPP4R1-204ENST00000577393 DPM2O94777 84 aa15.9■□□□□ 0.14
PPP4R1-204ENST00000577393 RPL24P83731 157 aaKnown RBP15.9■□□□□ 0.14
PPP4R1-204ENST00000577393 Q8NDZ9 215 aa15.9■□□□□ 0.14
PPP4R1-204ENST00000577393 NDUFA12Q9UI09 145 aa15.9■□□□□ 0.14
PPP4R1-204ENST00000577393 KRTAP1-4P0C5Y4 121 aa15.89■□□□□ 0.13
PPP4R1-204ENST00000577393 MAP1LC3CQ9BXW4 147 aa15.89■□□□□ 0.13
PPP4R1-204ENST00000577393 SMIM13P0DJ93 91 aa15.88■□□□□ 0.13
PPP4R1-204ENST00000577393 HERV-K104P63124 156 aa15.88■□□□□ 0.13
PPP4R1-204ENST00000577393 PRR26Q8N8Z3 221 aa15.88■□□□□ 0.13
PPP4R1-204ENST00000577393 IGKV2-28A0A075B6P5 120 aa15.87■□□□□ 0.13
PPP4R1-204ENST00000577393 IGKV2D-28P01615 120 aa15.87■□□□□ 0.13
PPP4R1-204ENST00000577393 MEIG1Q5JSS6 88 aa15.87■□□□□ 0.13
PPP4R1-204ENST00000577393 MYMXA0A1B0GTQ4 84 aa15.86■□□□□ 0.13
PPP4R1-204ENST00000577393 LEPROTO15243 131 aa15.86■□□□□ 0.13
PPP4R1-204ENST00000577393 IGKCP01834 107 aa15.86■□□□□ 0.13
PPP4R1-204ENST00000577393 RPL28P46779 137 aaKnown RBP15.86■□□□□ 0.13
PPP4R1-204ENST00000577393 TSPEAR-AS2P59090 65 aa15.86■□□□□ 0.13
PPP4R1-204ENST00000577393 ATP6V1G1O75348 118 aa15.85■□□□□ 0.13
PPP4R1-204ENST00000577393 PLEKHB2Q96CS7 222 aa15.85■□□□□ 0.13
PPP4R1-204ENST00000577393 IGLV1-50A0A075B6I6 118 aa15.84■□□□□ 0.13
PPP4R1-204ENST00000577393 HERVK_113P61574 105 aa15.83■□□□□ 0.12
PPP4R1-204ENST00000577393 LINC00587B1AMM8 73 aa15.82■□□□□ 0.12
PPP4R1-204ENST00000577393 MIR7-3HGQ8N6C7 128 aa15.82■□□□□ 0.12
PPP4R1-204ENST00000577393 J3QQQ9 107 aa15.81■□□□□ 0.12
PPP4R1-204ENST00000577393 SYS1-DBNDD2H3BUS1 97 aa15.79■□□□□ 0.12
PPP4R1-204ENST00000577393 UBE2AP49459 152 aa15.79■□□□□ 0.12
PPP4R1-204ENST00000577393 KRTAP13-1Q8IUC0 172 aa15.79■□□□□ 0.12
PPP4R1-204ENST00000577393 TMEM238C9JI98 176 aa15.78■□□□□ 0.12
PPP4R1-204ENST00000577393 BOD1L2Q8IYS8 172 aa15.77■□□□□ 0.12
PPP4R1-204ENST00000577393 TMEM126AQ9H061 195 aa15.77■□□□□ 0.12
PPP4R1-204ENST00000577393 LGALS3P17931 250 aaKnown RBP15.76■□□□□ 0.11
PPP4R1-204ENST00000577393 M0R378 163 aa15.75■□□□□ 0.11
PPP4R1-204ENST00000577393 NMUP48645 174 aa15.75■□□□□ 0.11
PPP4R1-204ENST00000577393 COA6Q5JTJ3 125 aaKnown RBP15.74■□□□□ 0.11
PPP4R1-204ENST00000577393 FAM19A1Q7Z5A9 133 aa15.73■□□□□ 0.11
PPP4R1-204ENST00000577393 RPL13AP40429 203 aaKnown RBP15.72■□□□□ 0.11
PPP4R1-204ENST00000577393 DAND5Q8N907 189 aa15.72■□□□□ 0.11
PPP4R1-204ENST00000577393 E9PLD3 99 aa15.71■□□□□ 0.11
PPP4R1-204ENST00000577393 PRLHP81277 87 aa15.71■□□□□ 0.11
PPP4R1-204ENST00000577393 LINC01545Q5VT33 79 aa15.71■□□□□ 0.11
PPP4R1-204ENST00000577393 PET117Q6UWS5 81 aa15.71■□□□□ 0.11
PPP4R1-204ENST00000577393 NCR3O14931 201 aa15.7■□□□□ 0.1
PPP4R1-204ENST00000577393 IGKV2D-26A0A0A0MRZ7 120 aa15.67■□□□□ 0.1
PPP4R1-204ENST00000577393 LOC107984156A0A0G2JMH3 177 aa15.67■□□□□ 0.1
PPP4R1-204ENST00000577393 C3orf79P0CE67 100 aa15.67■□□□□ 0.1
PPP4R1-204ENST00000577393 ARL17AQ8IVW1 177 aa15.67■□□□□ 0.1
PPP4R1-204ENST00000577393 UBR4Q5T4S7 5183 aa15.67■□□□□ 0.1
PPP4R1-204ENST00000577393 ANAPC11Q9NYG5 84 aa15.65■□□□□ 0.1
PPP4R1-204ENST00000577393 A0A087X002 238 aa15.64■□□□□ 0.09
PPP4R1-204ENST00000577393 A0A0J9YXY3 114 aa15.63■□□□□ 0.09
PPP4R1-204ENST00000577393 KRTDAPP60985 99 aa15.63■□□□□ 0.09
PPP4R1-204ENST00000577393 LRP2P98164 4655 aa15.62■□□□□ 0.09
PPP4R1-204ENST00000577393 PRYO14603 147 aa15.62■□□□□ 0.09
PPP4R1-204ENST00000577393 CRYGAP11844 174 aa15.62■□□□□ 0.09
PPP4R1-204ENST00000577393 S100A1P23297 94 aa15.61■□□□□ 0.09
PPP4R1-204ENST00000577393 KCNQ1DNQ9H478 68 aa15.61■□□□□ 0.09
PPP4R1-204ENST00000577393 TRBV10-3A0A0K0K1G6 114 aa15.6■□□□□ 0.09
PPP4R1-204ENST00000577393 MIEN1Q9BRT3 115 aa15.6■□□□□ 0.09
PPP4R1-204ENST00000577393 ADAMTSL4-AS1Q5T5F5 129 aa15.59■□□□□ 0.09
PPP4R1-204ENST00000577393 HIGD2AQ9BW72 106 aa15.58■□□□□ 0.08
PPP4R1-204ENST00000577393 TRBV10-2A0A0K0K1G8 114 aa15.57■□□□□ 0.08
PPP4R1-204ENST00000577393 SPRR1AP35321 89 aa15.57■□□□□ 0.08
PPP4R1-204ENST00000577393 FAM229BQ4G0N7 80 aa15.56■□□□□ 0.08
PPP4R1-204ENST00000577393 SOSTDC1Q6X4U4 206 aa15.56■□□□□ 0.08
PPP4R1-204ENST00000577393 TYMSOSQ8TAI1 123 aa15.56■□□□□ 0.08
PPP4R1-204ENST00000577393 NPC2P61916 151 aa15.55■□□□□ 0.08
PPP4R1-204ENST00000577393 LINC00337Q8N6G1 96 aa15.55■□□□□ 0.08
PPP4R1-204ENST00000577393 SPANXB1Q9NS25 103 aaPredicted RBP15.55■□□□□ 0.08
PPP4R1-204ENST00000577393 EIF4EBP3O60516 100 aaPredicted RBP15.54■□□□□ 0.08
PPP4R1-204ENST00000577393 NDUFC2O95298 119 aa15.54■□□□□ 0.08
PPP4R1-204ENST00000577393 KRTAP13-2Q52LG2 175 aa15.54■□□□□ 0.08
PPP4R1-204ENST00000577393 KRTAP4-16G5E9R7 235 aaPredicted RBP15.53■□□□□ 0.08
PPP4R1-204ENST00000577393 DDTP30046 118 aa15.53■□□□□ 0.08
PPP4R1-204ENST00000577393 ETDCA0A1B0GVM5 59 aa15.52■□□□□ 0.08
PPP4R1-204ENST00000577393 C20orf202A1L168 122 aa15.52■□□□□ 0.08
PPP4R1-204ENST00000577393 ZNF815PA8K554 130 aa15.52■□□□□ 0.08
PPP4R1-204ENST00000577393 S100A12P80511 92 aa15.52■□□□□ 0.08
PPP4R1-204ENST00000577393 LITAFQ99732 161 aa15.52■□□□□ 0.08
PPP4R1-204ENST00000577393 TTTY13Q9BZ97 58 aa15.52■□□□□ 0.08
PPP4R1-204ENST00000577393 TIMM17BO60830 172 aa15.5■□□□□ 0.07
PPP4R1-204ENST00000577393 S100A7L2Q5SY68 101 aa15.48■□□□□ 0.07
PPP4R1-204ENST00000577393 TSPAN13O95857 204 aa15.46■□□□□ 0.07
PPP4R1-204ENST00000577393 IGLV6-57P01721 117 aa15.46■□□□□ 0.07
PPP4R1-204ENST00000577393 ATOH7Q8N100 152 aa15.46■□□□□ 0.07
PPP4R1-204ENST00000577393 LINC00308Q8TCZ7 52 aa15.46■□□□□ 0.07
PPP4R1-204ENST00000577393 SPRR4Q96PI1 79 aa15.46■□□□□ 0.07
PPP4R1-204ENST00000577393 ANKRD39Q53RE8 183 aa15.45■□□□□ 0.06
PPP4R1-204ENST00000577393 SMCR5Q8TEV8 140 aa15.45■□□□□ 0.06
PPP4R1-204ENST00000577393 B5MCH6 92 aa15.44■□□□□ 0.06
PPP4R1-204ENST00000577393 HIST3H2BBQ8N257 126 aa15.44■□□□□ 0.06
PPP4R1-204ENST00000577393 ZNF706Q9Y5V0 76 aaPredicted RBP15.43■□□□□ 0.06
PPP4R1-204ENST00000577393 SPANXCQ9NY87 97 aa15.41■□□□□ 0.06
PPP4R1-204ENST00000577393 LPAP08519 4548 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms