RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 COPS9Q8WXC6 57 aa3.38□□□□□ -1.87
SNX11-204ENST00000577310 MRPL35Q9NZE8 188 aaKnown RBP3.38□□□□□ -1.87
SNX11-204ENST00000577310 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 MYMXA0A1B0GTQ4 84 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 A0A1W2PPM0 123 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 SDHAF1A6NFY7 115 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 C11orf86A6NJI1 115 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 I3L3M4 83 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 GNRH2O43555 120 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 TSHBP01222 138 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 RNASE3P12724 160 aaKnown RBP3.37□□□□□ -1.87
SNX11-204ENST00000577310 SUMO4Q6EEV6 95 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 FP248Q71RG6 208 aaPredicted RBP3.37□□□□□ -1.87
SNX11-204ENST00000577310 CEND1Q8N111 149 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 C15orf56Q8N910 161 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 NEXN-AS1Q8NBZ9 246 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 PLEKHB2Q96CS7 222 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 HIST1H4GQ99525 98 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 SPANXA1Q9NS26 97 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 SPCS1Q9Y6A9 102 aa3.37□□□□□ -1.87
SNX11-204ENST00000577310 TRBV6-8A0A0A6YYG3 113 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 TMEM238C9JI98 176 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 CCL25O15444 150 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 LGALS3P17931 250 aaKnown RBP3.36□□□□□ -1.87
SNX11-204ENST00000577310 POLR2KP53803 58 aaKnown RBP3.36□□□□□ -1.87
SNX11-204ENST00000577310 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 AMMECR1LQ6DCA0 310 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 VCX2Q9H322 139 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 PYGO1Q9Y3Y4 419 aa3.36□□□□□ -1.87
SNX11-204ENST00000577310 TRBV20-1A0A075B6N2 111 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 A0A087X002 238 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 ZNF815PA8K554 130 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 F8W1H4 67 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 H3BUT2 72 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 REG3AQ06141 175 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 OCIAD2Q56VL3 154 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 FAM74A4Q5TZK3 123 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 Q6ZVH6 145 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
SNX11-204ENST00000577310 PCP2Q8IVA1 136 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 RPL39LQ96EH5 51 aaKnown RBP3.35□□□□□ -1.87
SNX11-204ENST00000577310 VPS25Q9BRG1 176 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 CST9LQ9H4G1 147 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 SPANXB1Q9NS25 103 aaPredicted RBP3.35□□□□□ -1.87
SNX11-204ENST00000577310 NHP2Q9NX24 153 aaKnown RBP3.35□□□□□ -1.87
SNX11-204ENST00000577310 TP73-AS1Q9UF72 201 aa3.35□□□□□ -1.87
SNX11-204ENST00000577310 A0A087WZ39 114 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 M0QY20 66 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 RBX1P62877 108 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 RPL24P83731 157 aaKnown RBP3.34□□□□□ -1.87
SNX11-204ENST00000577310 COTL1Q14019 142 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 UFSP1Q6NVU6 142 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 C20orf203Q8NBC4 194 aa3.34□□□□□ -1.87
SNX11-204ENST00000577310 TRBV7-3A0A075B6L6 115 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 GVQW2A0A096LPI5 108 aaPredicted RBP3.33□□□□□ -1.88
SNX11-204ENST00000577310 IGKV2D-26A0A0A0MRZ7 120 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 IGIPA6NJ69 53 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 LEPROTO15243 131 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 UBE2D3P61077 147 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 UBE2D2P62837 147 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 C9orf116Q5BN46 136 aaPredicted RBP3.33□□□□□ -1.88
SNX11-204ENST00000577310 TMEM170BQ5T4T1 132 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 SFTA2Q6UW10 78 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 CHCHD5Q9BSY4 110 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 TIMM21Q9BVV7 248 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
SNX11-204ENST00000577310 A0A0J9YXY3 114 aa3.32□□□□□ -1.88
SNX11-204ENST00000577310 J3QQQ9 107 aa3.32□□□□□ -1.88
SNX11-204ENST00000577310 FXYD2P54710 66 aa3.32□□□□□ -1.88
SNX11-204ENST00000577310 MRPS36P82909 103 aaKnown RBP3.32□□□□□ -1.88
SNX11-204ENST00000577310 RPL36AP83881 106 aaKnown RBP3.32□□□□□ -1.88
SNX11-204ENST00000577310 RPL36ALQ969Q0 106 aaKnown RBP3.32□□□□□ -1.88
SNX11-204ENST00000577310 RAB37Q96AX2 223 aa3.32□□□□□ -1.88
SNX11-204ENST00000577310 IGLV4-69A0A075B6H9 119 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 A0A0B4J2C4 111 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 TINCRA0A1B0GVN0 87 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 H7C423 109 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 M0QXV9 152 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 TIMM17BO60830 172 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 COX6CP09669 75 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 SCGB1A1P11684 91 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 IFITM1P13164 125 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 HERVK_113P63121 156 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 GAGE2BQ13066 116 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 COX6B2Q6YFQ2 88 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
SNX11-204ENST00000577310 GEMIN7Q9H840 131 aaKnown RBP3.31□□□□□ -1.88
SNX11-204ENST00000577310 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
SNX11-204ENST00000577310 LOC107984640A0A0U1RRK4 108 aa3.3□□□□□ -1.88
SNX11-204ENST00000577310 TMEM223A0PJW6 202 aa3.3□□□□□ -1.88
SNX11-204ENST00000577310 ZNF861PO60384 105 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms