RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 C9orf163Q8N9P6 203 aa8.07□□□□□ -1.12
TSEN54-204ENST00000577197 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
TSEN54-204ENST00000577197 LECT2O14960 151 aa8.06□□□□□ -1.12
TSEN54-204ENST00000577197 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
TSEN54-204ENST00000577197 TAX1BP3O14907 124 aa8.05□□□□□ -1.12
TSEN54-204ENST00000577197 Q6ZRP5 223 aa8.05□□□□□ -1.12
TSEN54-204ENST00000577197 LINC00474Q9P2X8 69 aa8.05□□□□□ -1.12
TSEN54-204ENST00000577197 CBY1Q9Y3M2 126 aa8.05□□□□□ -1.12
TSEN54-204ENST00000577197 RYR3Q15413 4870 aa8.05□□□□□ -1.12
TSEN54-204ENST00000577197 IGLV5-37A0A075B6J1 123 aa8.04□□□□□ -1.12
TSEN54-204ENST00000577197 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
TSEN54-204ENST00000577197 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
TSEN54-204ENST00000577197 TNP2Q05952 138 aa8.04□□□□□ -1.12
TSEN54-204ENST00000577197 DNAH2Q9P225 4427 aa8.04□□□□□ -1.12
TSEN54-204ENST00000577197 IGKV2-28A0A075B6P5 120 aa8.03□□□□□ -1.12
TSEN54-204ENST00000577197 IGKV2D-28P01615 120 aa8.03□□□□□ -1.12
TSEN54-204ENST00000577197 NPC2P61916 151 aa8.03□□□□□ -1.12
TSEN54-204ENST00000577197 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
TSEN54-204ENST00000577197 TMEM126AQ9H061 195 aa8.02□□□□□ -1.13
TSEN54-204ENST00000577197 K7ERJ3 54 aa8.01□□□□□ -1.13
TSEN54-204ENST00000577197 VPREB1P12018 145 aa8.01□□□□□ -1.13
TSEN54-204ENST00000577197 RPL18AQ02543 176 aaKnown RBP8.01□□□□□ -1.13
TSEN54-204ENST00000577197 PGPEP1Q9NXJ5 209 aa8.01□□□□□ -1.13
TSEN54-204ENST00000577197 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
TSEN54-204ENST00000577197 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
TSEN54-204ENST00000577197 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
TSEN54-204ENST00000577197 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
TSEN54-204ENST00000577197 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.99□□□□□ -1.13
TSEN54-204ENST00000577197 M0R378 163 aa7.99□□□□□ -1.13
TSEN54-204ENST00000577197 TSPAN13O95857 204 aa7.99□□□□□ -1.13
TSEN54-204ENST00000577197 RPL13AP40429 203 aaKnown RBP7.99□□□□□ -1.13
TSEN54-204ENST00000577197 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
TSEN54-204ENST00000577197 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
TSEN54-204ENST00000577197 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
TSEN54-204ENST00000577197 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
TSEN54-204ENST00000577197 IGLV6-57P01721 117 aa7.98□□□□□ -1.13
TSEN54-204ENST00000577197 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
TSEN54-204ENST00000577197 A0A1W2PPM0 123 aa7.97□□□□□ -1.13
TSEN54-204ENST00000577197 EPM2AB3EWF7 344 aa7.97□□□□□ -1.13
TSEN54-204ENST00000577197 COX6CP09669 75 aa7.97□□□□□ -1.13
TSEN54-204ENST00000577197 FABP2P12104 132 aa7.97□□□□□ -1.13
TSEN54-204ENST00000577197 FRAS1Q86XX4 4008 aa7.96□□□□□ -1.14
TSEN54-204ENST00000577197 TRBV20-1A0A075B6N2 111 aa7.96□□□□□ -1.14
TSEN54-204ENST00000577197 A0A096LNI7 61 aa7.96□□□□□ -1.14
TSEN54-204ENST00000577197 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
TSEN54-204ENST00000577197 H3BUT2 72 aa7.96□□□□□ -1.14
TSEN54-204ENST00000577197 GAGE2BQ13066 116 aa7.96□□□□□ -1.14
TSEN54-204ENST00000577197 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
TSEN54-204ENST00000577197 Q1RN00 199 aa7.95□□□□□ -1.14
TSEN54-204ENST00000577197 S100A7L2Q5SY68 101 aa7.95□□□□□ -1.14
TSEN54-204ENST00000577197 NKAPP1Q8N9T2 125 aa7.95□□□□□ -1.14
TSEN54-204ENST00000577197 Q8NDZ9 215 aa7.95□□□□□ -1.14
TSEN54-204ENST00000577197 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
TSEN54-204ENST00000577197 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
TSEN54-204ENST00000577197 H0YGX0 51 aa7.93□□□□□ -1.14
TSEN54-204ENST00000577197 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
TSEN54-204ENST00000577197 NCR3O14931 201 aa7.92□□□□□ -1.14
TSEN54-204ENST00000577197 TRIAP1O43715 76 aa7.92□□□□□ -1.14
TSEN54-204ENST00000577197 PSMB2P49721 201 aa7.92□□□□□ -1.14
TSEN54-204ENST00000577197 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
TSEN54-204ENST00000577197 GTF2H5Q6ZYL4 71 aa7.92□□□□□ -1.14
TSEN54-204ENST00000577197 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
TSEN54-204ENST00000577197 KCNQ1DNQ9H478 68 aa7.92□□□□□ -1.14
TSEN54-204ENST00000577197 A0A1B0GX51 115 aa7.91□□□□□ -1.14
TSEN54-204ENST00000577197 SERTAD4-AS1Q5TG53 156 aa7.91□□□□□ -1.14
TSEN54-204ENST00000577197 MRPL55Q7Z7F7 128 aaKnown RBP7.91□□□□□ -1.14
TSEN54-204ENST00000577197 SMIM11BQ8TCY0 68 aa7.91□□□□□ -1.14
TSEN54-204ENST00000577197 TRAV23DV6A0A075B6W5 121 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 TRBV10-3A0A0K0K1G6 114 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 A0A1B0GV90 55 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 H7C2G1 150 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 K7EP34 96 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 PRYO14603 147 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 PRR3P79522 188 aaKnown RBP7.9□□□□□ -1.14
TSEN54-204ENST00000577197 VAMP3Q15836 100 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 C22orf24Q9Y442 160 aa7.9□□□□□ -1.14
TSEN54-204ENST00000577197 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
TSEN54-204ENST00000577197 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
TSEN54-204ENST00000577197 IGLV1-50A0A075B6I6 118 aa7.88□□□□□ -1.15
TSEN54-204ENST00000577197 IGKV2-24A0A0C4DH68 120 aa7.88□□□□□ -1.15
TSEN54-204ENST00000577197 GAGE10A6NGK3 116 aa7.88□□□□□ -1.15
TSEN54-204ENST00000577197 M0QXV9 152 aa7.88□□□□□ -1.15
TSEN54-204ENST00000577197 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
TSEN54-204ENST00000577197 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
TSEN54-204ENST00000577197 DNAH11Q96DT5 4516 aa7.88□□□□□ -1.15
TSEN54-204ENST00000577197 FAM168BA1KXE4 195 aa7.87□□□□□ -1.15
TSEN54-204ENST00000577197 ZNF73O43830 326 aaPredicted RBP7.87□□□□□ -1.15
TSEN54-204ENST00000577197 SPRR1AP35321 89 aa7.87□□□□□ -1.15
TSEN54-204ENST00000577197 ATXN8Q156A1 80 aa7.87□□□□□ -1.15
TSEN54-204ENST00000577197 Q6ZSA8 131 aa7.87□□□□□ -1.15
TSEN54-204ENST00000577197 DIRC1Q969H9 104 aa7.87□□□□□ -1.15
TSEN54-204ENST00000577197 HECTD4Q9Y4D8 3996 aa7.87□□□□□ -1.15
TSEN54-204ENST00000577197 PKD1P98161 4303 aa7.86□□□□□ -1.15
TSEN54-204ENST00000577197 A0A1W2PNN7 141 aa7.86□□□□□ -1.15
TSEN54-204ENST00000577197 LST1O00453 97 aa7.86□□□□□ -1.15
TSEN54-204ENST00000577197 SNCGO76070 127 aa7.86□□□□□ -1.15
TSEN54-204ENST00000577197 TRACP01848 142 aa7.86□□□□□ -1.15
TSEN54-204ENST00000577197 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
TSEN54-204ENST00000577197 UBE2V1Q13404 147 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms