RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 COL12A1Q99715 3063 aa5.4□□□□□ -1.55
TOM1L1-220ENST00000575333 UBR5O95071 2799 aaPredicted RBP5.4□□□□□ -1.55
TOM1L1-220ENST00000575333 TENM4Q6N022 2769 aa5.4□□□□□ -1.55
TOM1L1-220ENST00000575333 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 IGHV4-30-2A0A087WSY4 118 aa5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 H0Y9J4 135 aa5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 ATP6V0E1O15342 81 aa5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 PLA2G2AP14555 144 aa5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 SMIM29Q86T20 159 aa5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 GCN1Q92616 2671 aaKnown RBP5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 CCL24O00175 119 aa5.39□□□□□ -1.55
TOM1L1-220ENST00000575333 IGHV3-73A0A0B4J1V6 119 aa5.38□□□□□ -1.55
TOM1L1-220ENST00000575333 J3QKU1 62 aa5.38□□□□□ -1.55
TOM1L1-220ENST00000575333 DEFB1P60022 68 aa5.38□□□□□ -1.55
TOM1L1-220ENST00000575333 Q6ZQY7 126 aa5.38□□□□□ -1.55
TOM1L1-220ENST00000575333 KCNQ1DNQ9H478 68 aa5.38□□□□□ -1.55
TOM1L1-220ENST00000575333 H3BUA1 57 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 PRB3Q04118 309 aaPredicted RBP5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 BSPH1Q075Z2 132 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 HELZ2Q9BYK8 2649 aaKnown RBP5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 SEM1Q6ZVN7 128 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 Q8IZM0 81 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 USMG5Q96IX5 58 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 KRTAP4-12Q9BQ66 201 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 RHPN1-AS1Q9BWJ2 59 aa5.37□□□□□ -1.55
TOM1L1-220ENST00000575333 UTP20O75691 2785 aaKnown RBP5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 HIVEP3Q5T1R4 2406 aa5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 PROK1P58294 105 aa5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 C18orf65Q6ZTR6 163 aa5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 LINC00612Q8N6U2 182 aa5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 Q8N9L7 120 aa5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 WFDC10AQ9H1F0 79 aa5.36□□□□□ -1.55
TOM1L1-220ENST00000575333 IGHV4-59P01825 116 aa5.35□□□□□ -1.55
TOM1L1-220ENST00000575333 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
TOM1L1-220ENST00000575333 FAM215AQ9Y5M1 114 aa5.35□□□□□ -1.55
TOM1L1-220ENST00000575333 IGHV4-30-4P0DP06 118 aa5.34□□□□□ -1.55
TOM1L1-220ENST00000575333 PLAC8Q9NZF1 115 aa5.34□□□□□ -1.55
TOM1L1-220ENST00000575333 PCNX1Q96RV3 2341 aa5.34□□□□□ -1.55
TOM1L1-220ENST00000575333 FASNP49327 2511 aaKnown RBP5.34□□□□□ -1.55
TOM1L1-220ENST00000575333 USP9XQ93008 2570 aaPredicted RBP5.34□□□□□ -1.55
TOM1L1-220ENST00000575333 Q6ZSN1 163 aa5.34□□□□□ -1.55
TOM1L1-220ENST00000575333 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
TOM1L1-220ENST00000575333 SPINK13Q1W4C9 94 aa5.33□□□□□ -1.56
TOM1L1-220ENST00000575333 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
TOM1L1-220ENST00000575333 LRRK2Q5S007 2527 aa5.33□□□□□ -1.56
TOM1L1-220ENST00000575333 ADGRG4Q8IZF6 3080 aa5.33□□□□□ -1.56
TOM1L1-220ENST00000575333 WNK2Q9Y3S1 2297 aa5.32□□□□□ -1.56
TOM1L1-220ENST00000575333 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
TOM1L1-220ENST00000575333 IGLV6-57P01721 117 aa5.32□□□□□ -1.56
TOM1L1-220ENST00000575333 PRR4Q16378 134 aa5.32□□□□□ -1.56
TOM1L1-220ENST00000575333 A8MTW9 85 aa5.31□□□□□ -1.56
TOM1L1-220ENST00000575333 G3V318 75 aa5.31□□□□□ -1.56
TOM1L1-220ENST00000575333 CNBPP62633 177 aaKnown RBP5.31□□□□□ -1.56
TOM1L1-220ENST00000575333 ABCA4P78363 2273 aa5.31□□□□□ -1.56
TOM1L1-220ENST00000575333 SPTBN1Q01082 2364 aaKnown RBP5.31□□□□□ -1.56
TOM1L1-220ENST00000575333 IGHV4-28A0A0C4DH34 117 aa5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 ZFP36P26651 326 aaKnown RBP5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 SPAG11BQ08648 103 aa5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 CRYBG3Q68DQ2 2970 aa5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 DOPEY1Q5JWR5 2465 aa5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 IGHV4-61A0A0C4DH41 118 aa5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 IGHV3-11P01762 117 aa5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 C10orf25Q5T742 122 aa5.3□□□□□ -1.56
TOM1L1-220ENST00000575333 SPTAN1Q13813 2472 aaKnown RBP5.29□□□□□ -1.56
TOM1L1-220ENST00000575333 USP9YO00507 2555 aaPredicted RBP5.29□□□□□ -1.56
TOM1L1-220ENST00000575333 IGKV3-7A0A075B6H7 116 aa5.29□□□□□ -1.56
TOM1L1-220ENST00000575333 COA5Q86WW8 74 aa5.29□□□□□ -1.56
TOM1L1-220ENST00000575333 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
TOM1L1-220ENST00000575333 DOPEY2Q9Y3R5 2298 aa5.29□□□□□ -1.56
TOM1L1-220ENST00000575333 FBXL19-AS1Q494R0 122 aa5.28□□□□□ -1.56
TOM1L1-220ENST00000575333 ST20-AS1Q8NBB2 130 aa5.28□□□□□ -1.56
TOM1L1-220ENST00000575333 CENPEQ02224 2701 aa5.28□□□□□ -1.56
TOM1L1-220ENST00000575333 FSHBP01225 129 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 C5orf56Q8N8D9 126 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 DCHS2Q6V1P9 2916 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 BAHCC1Q9P281 2608 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 ICE1Q9Y2F5 2266 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 CELSR2Q9HCU4 2923 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 IGKV3-20P01619 116 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 GYPEP15421 78 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 DSCR9P59020 149 aa5.27□□□□□ -1.57
TOM1L1-220ENST00000575333 HECTD1Q9ULT8 2610 aa5.26□□□□□ -1.57
TOM1L1-220ENST00000575333 PTPN13Q12923 2485 aa5.26□□□□□ -1.57
TOM1L1-220ENST00000575333 NBPF19A0A087WUL8 3843 aa5.26□□□□□ -1.57
TOM1L1-220ENST00000575333 PRR3P79522 188 aaKnown RBP5.26□□□□□ -1.57
TOM1L1-220ENST00000575333 ODF3L2Q3SX64 289 aa5.26□□□□□ -1.57
TOM1L1-220ENST00000575333 KLK12Q9UKR0 248 aa5.25□□□□□ -1.57
TOM1L1-220ENST00000575333 ZNF706Q9Y5V0 76 aaPredicted RBP5.25□□□□□ -1.57
TOM1L1-220ENST00000575333 TACC2O95359 2948 aa5.25□□□□□ -1.57
TOM1L1-220ENST00000575333 LRBAP50851 2863 aa5.25□□□□□ -1.57
TOM1L1-220ENST00000575333 IGLV7-46A0A075B6I9 117 aa5.25□□□□□ -1.57
TOM1L1-220ENST00000575333 TRGV4A0A0C4DH28 118 aa5.25□□□□□ -1.57
TOM1L1-220ENST00000575333 C9orf163Q8N9P6 203 aa5.25□□□□□ -1.57
TOM1L1-220ENST00000575333 IGLV5-48A0A075B6I7 105 aa5.24□□□□□ -1.57
TOM1L1-220ENST00000575333 IGHV6-1A0A0B4J1U7 121 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms