RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 KCNIP2Q9NS61 270 aa2.77□□□□□ -1.97
TRIM25-208ENST00000574234 GSKIPQ9P0R6 139 aa2.77□□□□□ -1.97
TRIM25-208ENST00000574234 LSM5Q9Y4Y9 91 aaKnown RBP2.77□□□□□ -1.97
TRIM25-208ENST00000574234 FXYD6-FXYD2A0A087WZ82 144 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 IGKV2D-26A0A0A0MRZ7 120 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 HMGB3O15347 200 aaKnown RBP2.76□□□□□ -1.97
TRIM25-208ENST00000574234 ARPC5O15511 151 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 CST7O76096 145 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 LTAP01374 205 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 TCRAP04437 139 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 DDTP30046 118 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 RPL35P42766 123 aaKnown RBP2.76□□□□□ -1.97
TRIM25-208ENST00000574234 XCL1P47992 114 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 TAS2R45P59539 299 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 PEA15Q15121 130 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 COX6B2Q6YFQ2 88 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 IMMP2LQ96T52 175 aa2.76□□□□□ -1.97
TRIM25-208ENST00000574234 MRPL35Q9NZE8 188 aaKnown RBP2.76□□□□□ -1.97
TRIM25-208ENST00000574234 LINC00959A0A1B0GUT2 108 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 CCL25O15444 150 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 S100A2P29034 98 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 ATP5L2Q7Z4Y8 100 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 C5orf17Q8NAS9 161 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 OR2D3Q8NGH3 330 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 C14orf144Q96I85 54 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 EIF5A2Q9GZV4 153 aaKnown RBP2.75□□□□□ -1.97
TRIM25-208ENST00000574234 ANAPC11Q9NYG5 84 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
TRIM25-208ENST00000574234 GRIFINA4D1Z8 144 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 COLCA2A8K830 154 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 M0QY20 66 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 BCE1O60756 84 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 ZNF25P17030 456 aaPredicted RBP2.74□□□□□ -1.97
TRIM25-208ENST00000574234 RPS20P60866 119 aaKnown RBP2.74□□□□□ -1.97
TRIM25-208ENST00000574234 PCOTHQ58A44 107 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 BTF3L4Q96K17 158 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 ZNF471Q9BX82 626 aaPredicted RBP2.74□□□□□ -1.97
TRIM25-208ENST00000574234 TMEM242Q9NWH2 141 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 NDUFA12Q9UI09 145 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 UBE2D4Q9Y2X8 147 aa2.74□□□□□ -1.97
TRIM25-208ENST00000574234 BORCS7-ASMTA0A0B4J1R7 106 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 UMAD1C9J7I0 102 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 SMIM17P0DL12 118 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 CRIP1P50238 77 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 LINC00313P59037 77 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 FABP9Q0Z7S8 132 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 JOSD1Q15040 202 aaPredicted RBP2.73□□□□□ -1.97
TRIM25-208ENST00000574234 AMMECR1LQ6DCA0 310 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 FAM19A2Q8N3H0 131 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 PPP1R1CQ8WVI7 109 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 HIST1H2BAQ96A08 127 aa2.73□□□□□ -1.97
TRIM25-208ENST00000574234 IGSF23A1L1A6 192 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 TMEM238C9JI98 176 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 C17orf112F2Z3M2 114 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 SIX6O95475 246 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 PPBPP02775 128 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 CXCL1P09341 107 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 ADCYAP1P18509 176 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 G0S2P27469 103 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 HERVK_113P63121 156 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 SMIM15Q7Z3B0 74 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 AMN1Q8IY45 258 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 OR10AG1Q8NH19 301 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 AP1S3Q96PC3 154 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 WDR61Q9GZS3 305 aaKnown RBP2.72□□□□□ -1.97
TRIM25-208ENST00000574234 EPDR1Q9UM22 224 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 ARL2-SNX15V9GYD0 113 aa2.72□□□□□ -1.97
TRIM25-208ENST00000574234 M0R143 59 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 COX7A2LO14548 114 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 DLEU1O43261 78 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 SH2D1AO60880 128 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 NCR2O95944 276 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 SPINK1P00995 79 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 SPAG11BQ08648 103 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 IL15RAQ13261 267 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 BATFQ16520 125 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 PYY3Q5JQD4 70 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 RASL11AQ6T310 242 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 KRTAP13-1Q8IUC0 172 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 OR10D4PQ8NGN7 298 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 CYTL1Q9NRR1 136 aa2.71□□□□□ -1.98
TRIM25-208ENST00000574234 TMSB15BA0A087X1C1 80 aa2.7□□□□□ -1.98
TRIM25-208ENST00000574234 A0A1B0GV90 55 aa2.7□□□□□ -1.98
TRIM25-208ENST00000574234 C7orf77A4D0Y5 90 aa2.7□□□□□ -1.98
TRIM25-208ENST00000574234 K7ERS5 55 aa2.7□□□□□ -1.98
TRIM25-208ENST00000574234 NDUFA1O15239 70 aa2.7□□□□□ -1.98
TRIM25-208ENST00000574234 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
TRIM25-208ENST00000574234 SPANXN1Q5VSR9 72 aa2.7□□□□□ -1.98
TRIM25-208ENST00000574234 Q86TA4 180 aa2.7□□□□□ -1.98
TRIM25-208ENST00000574234 TRBV24-1A0A075B6N3 115 aa2.69□□□□□ -1.98
TRIM25-208ENST00000574234 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.69□□□□□ -1.98
TRIM25-208ENST00000574234 IGKV2-29A2NJV5 120 aaPredicted RBP2.69□□□□□ -1.98
TRIM25-208ENST00000574234 MT2AP02795 61 aa2.69□□□□□ -1.98
TRIM25-208ENST00000574234 PMAIP1Q13794 54 aa2.69□□□□□ -1.98
TRIM25-208ENST00000574234 LINC00483Q53H64 154 aa2.69□□□□□ -1.98
TRIM25-208ENST00000574234 C3orf22Q8N5N4 141 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms