RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 C20orf202A1L168 122 aa8.63□□□□□ -1.03
TVP23A-208ENST00000573857 IGKCP01834 107 aa8.63□□□□□ -1.03
TVP23A-208ENST00000573857 HERVK_113P61574 105 aa8.63□□□□□ -1.03
TVP23A-208ENST00000573857 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
TVP23A-208ENST00000573857 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
TVP23A-208ENST00000573857 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
TVP23A-208ENST00000573857 LINC01545Q5VT33 79 aa8.61□□□□□ -1.03
TVP23A-208ENST00000573857 KRTDAPP60985 99 aa8.6□□□□□ -1.03
TVP23A-208ENST00000573857 HIST3H2BBQ8N257 126 aa8.6□□□□□ -1.03
TVP23A-208ENST00000573857 LINC00587B1AMM8 73 aa8.59□□□□□ -1.03
TVP23A-208ENST00000573857 C3orf79P0CE67 100 aa8.59□□□□□ -1.03
TVP23A-208ENST00000573857 COX17Q14061 63 aa8.59□□□□□ -1.03
TVP23A-208ENST00000573857 PLEKHB2Q96CS7 222 aa8.59□□□□□ -1.03
TVP23A-208ENST00000573857 HIST1H2BLQ99880 126 aa8.58□□□□□ -1.04
TVP23A-208ENST00000573857 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
TVP23A-208ENST00000573857 SNRPEP62304 92 aaKnown RBP8.57□□□□□ -1.04
TVP23A-208ENST00000573857 HERV-K104P63124 156 aa8.57□□□□□ -1.04
TVP23A-208ENST00000573857 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
TVP23A-208ENST00000573857 LEPROTO15243 131 aa8.56□□□□□ -1.04
TVP23A-208ENST00000573857 RPL13AP40429 203 aaKnown RBP8.56□□□□□ -1.04
TVP23A-208ENST00000573857 NMUP48645 174 aa8.56□□□□□ -1.04
TVP23A-208ENST00000573857 PMCHL2Q9BQD1 86 aa8.56□□□□□ -1.04
TVP23A-208ENST00000573857 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
TVP23A-208ENST00000573857 C22orf24Q9Y442 160 aa8.56□□□□□ -1.04
TVP23A-208ENST00000573857 ZNF861PO60384 105 aa8.55□□□□□ -1.04
TVP23A-208ENST00000573857 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
TVP23A-208ENST00000573857 ZNF625Q96I27 306 aaPredicted RBP8.54□□□□□ -1.04
TVP23A-208ENST00000573857 E9PLD3 99 aa8.53□□□□□ -1.04
TVP23A-208ENST00000573857 J3QQQ9 107 aa8.53□□□□□ -1.04
TVP23A-208ENST00000573857 LGALS3P17931 250 aaKnown RBP8.53□□□□□ -1.04
TVP23A-208ENST00000573857 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
TVP23A-208ENST00000573857 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
TVP23A-208ENST00000573857 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
TVP23A-208ENST00000573857 MRPL55Q7Z7F7 128 aaKnown RBP8.51□□□□□ -1.05
TVP23A-208ENST00000573857 HSBP1L1C9JCN9 74 aa8.49□□□□□ -1.05
TVP23A-208ENST00000573857 PFN2P35080 140 aa8.49□□□□□ -1.05
TVP23A-208ENST00000573857 PRR4Q16378 134 aa8.49□□□□□ -1.05
TVP23A-208ENST00000573857 MEIG1Q5JSS6 88 aa8.49□□□□□ -1.05
TVP23A-208ENST00000573857 BCE1O60756 84 aa8.48□□□□□ -1.05
TVP23A-208ENST00000573857 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
TVP23A-208ENST00000573857 LINC00158P58513 81 aa8.48□□□□□ -1.05
TVP23A-208ENST00000573857 LINC00167Q96N53 147 aa8.47□□□□□ -1.05
TVP23A-208ENST00000573857 MUC2Q02817 5179 aa8.47□□□□□ -1.05
TVP23A-208ENST00000573857 A0A087X002 238 aa8.46□□□□□ -1.06
TVP23A-208ENST00000573857 RPL37AP8A6NKH3 93 aa8.46□□□□□ -1.06
TVP23A-208ENST00000573857 SCGB1D1O95968 90 aa8.46□□□□□ -1.06
TVP23A-208ENST00000573857 RPL24P83731 157 aaKnown RBP8.46□□□□□ -1.06
TVP23A-208ENST00000573857 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
TVP23A-208ENST00000573857 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
TVP23A-208ENST00000573857 IGLV5-37A0A075B6J1 123 aa8.44□□□□□ -1.06
TVP23A-208ENST00000573857 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
TVP23A-208ENST00000573857 TSPAN13O95857 204 aa8.43□□□□□ -1.06
TVP23A-208ENST00000573857 SMIM13P0DJ93 91 aa8.43□□□□□ -1.06
TVP23A-208ENST00000573857 CRYGAP11844 174 aa8.43□□□□□ -1.06
TVP23A-208ENST00000573857 ATOH7Q8N100 152 aa8.43□□□□□ -1.06
TVP23A-208ENST00000573857 TMA7Q9Y2S6 64 aaKnown RBP8.43□□□□□ -1.06
TVP23A-208ENST00000573857 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
TVP23A-208ENST00000573857 TIMM17BO60830 172 aa8.42□□□□□ -1.06
TVP23A-208ENST00000573857 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
TVP23A-208ENST00000573857 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
TVP23A-208ENST00000573857 MIEN1Q9BRT3 115 aa8.42□□□□□ -1.06
TVP23A-208ENST00000573857 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
TVP23A-208ENST00000573857 MIR7-3HGQ8N6C7 128 aa8.41□□□□□ -1.06
TVP23A-208ENST00000573857 TYMSOSQ8TAI1 123 aa8.41□□□□□ -1.06
TVP23A-208ENST00000573857 COPS9Q8WXC6 57 aa8.41□□□□□ -1.06
TVP23A-208ENST00000573857 IGKV2D-26A0A0A0MRZ7 120 aa8.4□□□□□ -1.06
TVP23A-208ENST00000573857 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
TVP23A-208ENST00000573857 UBE2AP49459 152 aa8.4□□□□□ -1.06
TVP23A-208ENST00000573857 JOSD1Q15040 202 aaPredicted RBP8.4□□□□□ -1.06
TVP23A-208ENST00000573857 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
TVP23A-208ENST00000573857 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.06
TVP23A-208ENST00000573857 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
TVP23A-208ENST00000573857 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
TVP23A-208ENST00000573857 SCGB1D4Q6XE38 83 aa8.39□□□□□ -1.07
TVP23A-208ENST00000573857 IGKV2-28A0A075B6P5 120 aa8.38□□□□□ -1.07
TVP23A-208ENST00000573857 TMEM238C9JI98 176 aa8.38□□□□□ -1.07
TVP23A-208ENST00000573857 IGKV2D-28P01615 120 aa8.38□□□□□ -1.07
TVP23A-208ENST00000573857 Q6ZVH6 145 aa8.38□□□□□ -1.07
TVP23A-208ENST00000573857 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
TVP23A-208ENST00000573857 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
TVP23A-208ENST00000573857 VPREB1P12018 145 aa8.36□□□□□ -1.07
TVP23A-208ENST00000573857 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
TVP23A-208ENST00000573857 NDUFC2O95298 119 aa8.35□□□□□ -1.07
TVP23A-208ENST00000573857 S100A12P80511 92 aa8.35□□□□□ -1.07
TVP23A-208ENST00000573857 VAMP8Q9BV40 100 aa8.35□□□□□ -1.07
TVP23A-208ENST00000573857 PPDPFQ9H3Y8 114 aa8.35□□□□□ -1.07
TVP23A-208ENST00000573857 M0R378 163 aa8.34□□□□□ -1.07
TVP23A-208ENST00000573857 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 IFITM1P13164 125 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 PRLHP81277 87 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 DAND5Q8N907 189 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 TMEM126AQ9H061 195 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 SPANXCQ9NY87 97 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
TVP23A-208ENST00000573857 DLEU1O43261 78 aa8.32□□□□□ -1.08
TVP23A-208ENST00000573857 ADAMTSL4-AS1Q5T5F5 129 aa8.32□□□□□ -1.08
TVP23A-208ENST00000573857 FAM19A1Q7Z5A9 133 aa8.32□□□□□ -1.08
TVP23A-208ENST00000573857 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms