RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 C9orf116Q5BN46 136 aaPredicted RBP3.07□□□□□ -1.92
NDE1-204ENST00000572503 CFAP161Q6P656 301 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 UNQ6190/PRO20217Q6UXQ8 127 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 C2orf48Q96LS8 159 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 KRTAP1-5Q9BYS1 174 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 C6orf48Q9UBA6 75 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 TRBV20-1A0A075B6N2 111 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 F8WDY8 70 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 H3BMG7 143 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 M0QXV9 152 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 LST1O00453 97 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 NDUFC2O95298 119 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 MALP21145 153 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 LINC00158P58513 81 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 KMT2AQ03164 3969 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 CASC10Q5T4H9 136 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 LYRM7Q5U5X0 104 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 LINC00526Q96FQ7 95 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 C1orf43Q9BWL3 253 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 SND1-IT1Q9HBX3 110 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 DNAH8Q96JB1 4490 aa3.06□□□□□ -1.92
NDE1-204ENST00000572503 TGP01266 2768 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 TRAV13-2A0A0B4J235 113 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 F8W1H4 67 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 SLPIP03973 132 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 PFN2P35080 140 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 RPL28P46779 137 aaKnown RBP3.05□□□□□ -1.92
NDE1-204ENST00000572503 CKS1BP61024 79 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 WFDC2Q14508 124 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 Q6ZRU5 148 aa3.05□□□□□ -1.92
NDE1-204ENST00000572503 IGKV2D-24A0A075B6R9 120 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 H7C2G1 150 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 TLX1NBP0CAT3 122 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 PSMB2P49721 201 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 RNF151Q2KHN1 245 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 LINC01620Q4KN68 170 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 HIGD2BQ4VC39 106 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 OCIAD2Q56VL3 154 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
NDE1-204ENST00000572503 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 TRBV10-2A0A0K0K1G8 114 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 NUPR2A6NF83 97 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 USP17L23D6RBM5 183 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 IGLV6-57P01721 117 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 VPREB1P12018 145 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 ATXN8Q156A1 80 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 Q1RN00 199 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 Q6ZRN7 208 aaPredicted RBP3.03□□□□□ -1.92
NDE1-204ENST00000572503 MTURNQ8N3F0 131 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 SMIM11BQ8TCY0 68 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 CLEC2BQ92478 149 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 FAM218AQ96MZ4 157 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 Q9HAA7 133 aa3.03□□□□□ -1.92
NDE1-204ENST00000572503 NDUFC2-KCTD14E9PQ53 114 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 H3BT86 120 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 ZNF561-AS1K7EIQ3 104 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 SLC25A20O43772 301 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 TRACP01848 142 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 PRR3P79522 188 aaKnown RBP3.02□□□□□ -1.93
NDE1-204ENST00000572503 SYCNQ0VAF6 134 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 ETDBQ3ZM63 59 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 RMI2Q96E14 147 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 CAMK2N2Q96S95 79 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 PLA2G2DQ9UNK4 145 aa3.02□□□□□ -1.93
NDE1-204ENST00000572503 IGLV5-37A0A075B6J1 123 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 C9JAW5 83 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 COX6CP09669 75 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 C9orf129Q5T035 196 aaKnown RBP3.01□□□□□ -1.93
NDE1-204ENST00000572503 Q6ZRP5 223 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 TEN1Q86WV5 123 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 KRTAP7-1Q8IUC3 87 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 ANKRD29Q8N6D5 301 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
NDE1-204ENST00000572503 A0A087WYN8 130 aa3□□□□□ -1.93
NDE1-204ENST00000572503 NBDYA0A0U1RRE5 68 aa3□□□□□ -1.93
NDE1-204ENST00000572503 A0A1B0GX51 115 aa3□□□□□ -1.93
NDE1-204ENST00000572503 LRCOL1A6NCL2 159 aa3□□□□□ -1.93
NDE1-204ENST00000572503 H0YGX0 51 aa3□□□□□ -1.93
NDE1-204ENST00000572503 NCR3O14931 201 aa3□□□□□ -1.93
NDE1-204ENST00000572503 CNBPP62633 177 aaKnown RBP3□□□□□ -1.93
NDE1-204ENST00000572503 Q6ZR54 194 aa3□□□□□ -1.93
NDE1-204ENST00000572503 TMEM126AQ9H061 195 aa3□□□□□ -1.93
NDE1-204ENST00000572503 XAGE1AQ9HD64 81 aa3□□□□□ -1.93
NDE1-204ENST00000572503 PKD1P98161 4303 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 TRBV10-3A0A0K0K1G6 114 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 K7ERU9 68 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 M0R378 163 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 RPL18AQ02543 176 aaKnown RBP2.99□□□□□ -1.93
NDE1-204ENST00000572503 TTC32Q5I0X7 151 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 SERTAD4-AS1Q5TG53 156 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 UBE2DNLQ8IWF7 75 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 PPDPFLQ8WWR9 84 aa2.99□□□□□ -1.93
NDE1-204ENST00000572503 TRBV7-6A0A0J9YX20 115 aa2.98□□□□□ -1.93
NDE1-204ENST00000572503 KRTAP4-16G5E9R7 235 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms