RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 C1orf137Q5JT78 98 aa6.27□□□□□ -1.41
GTF3C1-213ENST00000571886 SPINK6Q6UWN8 80 aa6.27□□□□□ -1.41
GTF3C1-213ENST00000571886 ODF1Q14990 250 aa6.26□□□□□ -1.41
GTF3C1-213ENST00000571886 PET117Q6UWS5 81 aa6.26□□□□□ -1.41
GTF3C1-213ENST00000571886 IFI27L1Q96BM0 104 aa6.26□□□□□ -1.41
GTF3C1-213ENST00000571886 C22orf24Q9Y442 160 aa6.26□□□□□ -1.41
GTF3C1-213ENST00000571886 H3BRM9 83 aa6.25□□□□□ -1.41
GTF3C1-213ENST00000571886 LINC01600Q96MT4 127 aa6.25□□□□□ -1.41
GTF3C1-213ENST00000571886 UQCR10Q9UDW1 63 aa6.25□□□□□ -1.41
GTF3C1-213ENST00000571886 HSPB8Q9UJY1 196 aa6.25□□□□□ -1.41
GTF3C1-213ENST00000571886 CHTOPQ9Y3Y2 248 aaKnown RBP6.25□□□□□ -1.41
GTF3C1-213ENST00000571886 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
GTF3C1-213ENST00000571886 IGLV7-43P04211 117 aa6.24□□□□□ -1.41
GTF3C1-213ENST00000571886 TMEM170BQ5T4T1 132 aa6.24□□□□□ -1.41
GTF3C1-213ENST00000571886 TNXBP22105 4242 aa6.24□□□□□ -1.41
GTF3C1-213ENST00000571886 TRAV12-1A0A0B4J245 112 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 SYS1-DBNDD2H3BUS1 97 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 KRTAP10-8P60410 259 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 UBE2BP63146 152 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 SPATA45Q537H7 98 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 MAP1LC3CQ9BXW4 147 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 PAM16Q9Y3D7 125 aa6.23□□□□□ -1.41
GTF3C1-213ENST00000571886 TMEM223A0PJW6 202 aa6.22□□□□□ -1.41
GTF3C1-213ENST00000571886 PFN2P35080 140 aa6.22□□□□□ -1.41
GTF3C1-213ENST00000571886 H0Y8G0 127 aa6.21□□□□□ -1.42
GTF3C1-213ENST00000571886 A0A1B0GV90 55 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 RPL37AP8A6NKH3 93 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 REG3GQ6UW15 175 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 MRPL55Q7Z7F7 128 aaKnown RBP6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 Q8NDZ9 215 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 LINC00167Q96N53 147 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 ERG28Q9UKR5 140 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
GTF3C1-213ENST00000571886 GAGE10A6NGK3 116 aa6.19□□□□□ -1.42
GTF3C1-213ENST00000571886 PMCHL2Q9BQD1 86 aa6.19□□□□□ -1.42
GTF3C1-213ENST00000571886 SND1-IT1Q9HBX3 110 aa6.19□□□□□ -1.42
GTF3C1-213ENST00000571886 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
GTF3C1-213ENST00000571886 IGLV5-37A0A075B6J1 123 aa6.18□□□□□ -1.42
GTF3C1-213ENST00000571886 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
GTF3C1-213ENST00000571886 COL5A1-AS1Q5SY13 56 aa6.18□□□□□ -1.42
GTF3C1-213ENST00000571886 A0A0U1RRA0 63 aa6.17□□□□□ -1.42
GTF3C1-213ENST00000571886 H0Y9J4 135 aa6.17□□□□□ -1.42
GTF3C1-213ENST00000571886 VPREB1P12018 145 aa6.17□□□□□ -1.42
GTF3C1-213ENST00000571886 DIRC1Q969H9 104 aa6.17□□□□□ -1.42
GTF3C1-213ENST00000571886 KRTAP1-4P0C5Y4 121 aa6.16□□□□□ -1.42
GTF3C1-213ENST00000571886 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
GTF3C1-213ENST00000571886 PRR26Q8N8Z3 221 aa6.16□□□□□ -1.42
GTF3C1-213ENST00000571886 UBR4Q5T4S7 5183 aa6.15□□□□□ -1.42
GTF3C1-213ENST00000571886 DLEU1O43261 78 aa6.15□□□□□ -1.42
GTF3C1-213ENST00000571886 ZNF861PO60384 105 aa6.15□□□□□ -1.42
GTF3C1-213ENST00000571886 SMIM13P0DJ93 91 aa6.15□□□□□ -1.42
GTF3C1-213ENST00000571886 LINC00158P58513 81 aa6.15□□□□□ -1.42
GTF3C1-213ENST00000571886 COX17Q14061 63 aa6.15□□□□□ -1.42
GTF3C1-213ENST00000571886 SLC25A34Q6PIV7 304 aa6.15□□□□□ -1.42
GTF3C1-213ENST00000571886 ATOH7Q8N100 152 aa6.14□□□□□ -1.43
GTF3C1-213ENST00000571886 NKAPP1Q8N9T2 125 aa6.14□□□□□ -1.43
GTF3C1-213ENST00000571886 IGLV1-50A0A075B6I6 118 aa6.13□□□□□ -1.43
GTF3C1-213ENST00000571886 IGKV2-28A0A075B6P5 120 aa6.13□□□□□ -1.43
GTF3C1-213ENST00000571886 BCE1O60756 84 aa6.13□□□□□ -1.43
GTF3C1-213ENST00000571886 IGKV2D-28P01615 120 aa6.13□□□□□ -1.43
GTF3C1-213ENST00000571886 COX8AP10176 69 aa6.13□□□□□ -1.43
GTF3C1-213ENST00000571886 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
GTF3C1-213ENST00000571886 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
GTF3C1-213ENST00000571886 LEPROTO15243 131 aa6.12□□□□□ -1.43
GTF3C1-213ENST00000571886 DPM2O94777 84 aa6.12□□□□□ -1.43
GTF3C1-213ENST00000571886 IGKCP01834 107 aa6.12□□□□□ -1.43
GTF3C1-213ENST00000571886 SFTA2Q6UW10 78 aa6.12□□□□□ -1.43
GTF3C1-213ENST00000571886 KRTAP13-1Q8IUC0 172 aa6.12□□□□□ -1.43
GTF3C1-213ENST00000571886 PLNP26678 52 aa6.11□□□□□ -1.43
GTF3C1-213ENST00000571886 MEIG1Q5JSS6 88 aa6.11□□□□□ -1.43
GTF3C1-213ENST00000571886 MIR7-3HGQ8N6C7 128 aa6.11□□□□□ -1.43
GTF3C1-213ENST00000571886 MYMXA0A1B0GTQ4 84 aa6.1□□□□□ -1.43
GTF3C1-213ENST00000571886 J3QQQ9 107 aa6.1□□□□□ -1.43
GTF3C1-213ENST00000571886 HERV-K104P63124 156 aa6.1□□□□□ -1.43
GTF3C1-213ENST00000571886 RPL24P83731 157 aaKnown RBP6.1□□□□□ -1.43
GTF3C1-213ENST00000571886 BOD1L2Q8IYS8 172 aa6.1□□□□□ -1.43
GTF3C1-213ENST00000571886 PLEKHB2Q96CS7 222 aa6.1□□□□□ -1.43
GTF3C1-213ENST00000571886 ANAPC11Q9NYG5 84 aa6.1□□□□□ -1.43
GTF3C1-213ENST00000571886 M0R378 163 aa6.09□□□□□ -1.43
GTF3C1-213ENST00000571886 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
GTF3C1-213ENST00000571886 DAND5Q8N907 189 aa6.09□□□□□ -1.43
GTF3C1-213ENST00000571886 NCR3O14931 201 aa6.08□□□□□ -1.44
GTF3C1-213ENST00000571886 UBE2AP49459 152 aa6.08□□□□□ -1.44
GTF3C1-213ENST00000571886 HINT1P49773 126 aaPredicted RBP6.08□□□□□ -1.44
GTF3C1-213ENST00000571886 PRLHP81277 87 aa6.08□□□□□ -1.44
GTF3C1-213ENST00000571886 BATFQ16520 125 aa6.08□□□□□ -1.44
GTF3C1-213ENST00000571886 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
GTF3C1-213ENST00000571886 TMEM126AQ9H061 195 aa6.08□□□□□ -1.44
GTF3C1-213ENST00000571886 A0A087X002 238 aa6.07□□□□□ -1.44
GTF3C1-213ENST00000571886 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
GTF3C1-213ENST00000571886 LGALS3P17931 250 aaKnown RBP6.07□□□□□ -1.44
GTF3C1-213ENST00000571886 HERVK_113P61574 105 aa6.07□□□□□ -1.44
GTF3C1-213ENST00000571886 FAM19A1Q7Z5A9 133 aa6.07□□□□□ -1.44
GTF3C1-213ENST00000571886 HIGD1BQ9P298 99 aa6.07□□□□□ -1.44
GTF3C1-213ENST00000571886 E9PLD3 99 aa6.06□□□□□ -1.44
GTF3C1-213ENST00000571886 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
GTF3C1-213ENST00000571886 ADAMTSL4-AS1Q5T5F5 129 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms