RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 ANAPC11Q9NYG5 84 aa8.01□□□□□ -1.13
CNOT1-215ENST00000569020 IGKV2-28A0A075B6P5 120 aa8□□□□□ -1.13
CNOT1-215ENST00000569020 IGKV2D-28P01615 120 aa8□□□□□ -1.13
CNOT1-215ENST00000569020 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
CNOT1-215ENST00000569020 CHCHD1Q96BP2 118 aaKnown RBP8□□□□□ -1.13
CNOT1-215ENST00000569020 IGLV5-39A0A0G2JS06 123 aa7.99□□□□□ -1.13
CNOT1-215ENST00000569020 PFN2P35080 140 aa7.99□□□□□ -1.13
CNOT1-215ENST00000569020 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
CNOT1-215ENST00000569020 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
CNOT1-215ENST00000569020 C11orf86A6NJI1 115 aa7.98□□□□□ -1.13
CNOT1-215ENST00000569020 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
CNOT1-215ENST00000569020 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
CNOT1-215ENST00000569020 MUC2Q02817 5179 aa7.98□□□□□ -1.13
CNOT1-215ENST00000569020 IGKV2D-26A0A0A0MRZ7 120 aa7.97□□□□□ -1.13
CNOT1-215ENST00000569020 SCO1O75880 301 aa7.97□□□□□ -1.13
CNOT1-215ENST00000569020 TRGC2P03986 189 aa7.97□□□□□ -1.13
CNOT1-215ENST00000569020 S100A1P23297 94 aa7.97□□□□□ -1.13
CNOT1-215ENST00000569020 FAM19A1Q7Z5A9 133 aa7.97□□□□□ -1.13
CNOT1-215ENST00000569020 PRLHP81277 87 aa7.96□□□□□ -1.14
CNOT1-215ENST00000569020 RPL24P83731 157 aaKnown RBP7.96□□□□□ -1.14
CNOT1-215ENST00000569020 ERG28Q9UKR5 140 aa7.96□□□□□ -1.14
CNOT1-215ENST00000569020 COX17Q14061 63 aa7.95□□□□□ -1.14
CNOT1-215ENST00000569020 TMEM170BQ5T4T1 132 aa7.95□□□□□ -1.14
CNOT1-215ENST00000569020 IFI27L1Q96BM0 104 aa7.95□□□□□ -1.14
CNOT1-215ENST00000569020 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
CNOT1-215ENST00000569020 TMEM126AQ9H061 195 aa7.95□□□□□ -1.14
CNOT1-215ENST00000569020 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
CNOT1-215ENST00000569020 CHTOPQ9Y3Y2 248 aaKnown RBP7.95□□□□□ -1.14
CNOT1-215ENST00000569020 TRAV12-1A0A0B4J245 112 aa7.94□□□□□ -1.14
CNOT1-215ENST00000569020 COLCA2A8K830 154 aa7.94□□□□□ -1.14
CNOT1-215ENST00000569020 HSBP1O75506 76 aa7.94□□□□□ -1.14
CNOT1-215ENST00000569020 VPREB1P12018 145 aa7.94□□□□□ -1.14
CNOT1-215ENST00000569020 LINC00310P59036 64 aa7.94□□□□□ -1.14
CNOT1-215ENST00000569020 FAM19A2Q8N3H0 131 aa7.94□□□□□ -1.14
CNOT1-215ENST00000569020 CTAG1AP78358 180 aa7.93□□□□□ -1.14
CNOT1-215ENST00000569020 SFTA2Q6UW10 78 aa7.93□□□□□ -1.14
CNOT1-215ENST00000569020 TMEM238C9JI98 176 aa7.92□□□□□ -1.14
CNOT1-215ENST00000569020 SERF1AO75920 110 aa7.92□□□□□ -1.14
CNOT1-215ENST00000569020 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-215ENST00000569020 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
CNOT1-215ENST00000569020 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
CNOT1-215ENST00000569020 M0R378 163 aa7.91□□□□□ -1.14
CNOT1-215ENST00000569020 KRTAP9-9Q9BYP9 154 aa7.91□□□□□ -1.14
CNOT1-215ENST00000569020 KRTAP9-4Q9BYQ2 154 aa7.91□□□□□ -1.14
CNOT1-215ENST00000569020 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
CNOT1-215ENST00000569020 PLEKHB2Q96CS7 222 aa7.9□□□□□ -1.14
CNOT1-215ENST00000569020 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
CNOT1-215ENST00000569020 LEPROTL1O95214 131 aa7.88□□□□□ -1.15
CNOT1-215ENST00000569020 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
CNOT1-215ENST00000569020 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
CNOT1-215ENST00000569020 H0Y8G0 127 aa7.87□□□□□ -1.15
CNOT1-215ENST00000569020 LINC00158P58513 81 aa7.87□□□□□ -1.15
CNOT1-215ENST00000569020 C3orf22Q8N5N4 141 aa7.87□□□□□ -1.15
CNOT1-215ENST00000569020 Q8NDZ9 215 aa7.87□□□□□ -1.15
CNOT1-215ENST00000569020 SPAG11AQ6PDA7 123 aa7.86□□□□□ -1.15
CNOT1-215ENST00000569020 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-215ENST00000569020 A0A0U1RRA0 63 aa7.84□□□□□ -1.15
CNOT1-215ENST00000569020 FABP4P15090 132 aa7.84□□□□□ -1.15
CNOT1-215ENST00000569020 SPRR4Q96PI1 79 aa7.84□□□□□ -1.15
CNOT1-215ENST00000569020 PPDPFQ9H3Y8 114 aa7.84□□□□□ -1.15
CNOT1-215ENST00000569020 HSPB8Q9UJY1 196 aa7.84□□□□□ -1.15
CNOT1-215ENST00000569020 PRYO14603 147 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BKO60814 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BJP06899 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BOP23527 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 PLNP26678 52 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BBP33778 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BDP58876 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BCP62807 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST2H2BEQ16778 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 MEIG1Q5JSS6 88 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BHQ93079 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BNQ99877 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 HIST1H2BMQ99879 126 aa7.81□□□□□ -1.16
CNOT1-215ENST00000569020 DPM2O94777 84 aa7.8□□□□□ -1.16
CNOT1-215ENST00000569020 SMIM13P0DJ93 91 aa7.8□□□□□ -1.16
CNOT1-215ENST00000569020 HERV-K104P63124 156 aa7.8□□□□□ -1.16
CNOT1-215ENST00000569020 FP248Q71RG6 208 aaPredicted RBP7.8□□□□□ -1.16
CNOT1-215ENST00000569020 KRTAP19-1Q8IUB9 90 aa7.8□□□□□ -1.16
CNOT1-215ENST00000569020 BOD1L2Q8IYS8 172 aa7.8□□□□□ -1.16
CNOT1-215ENST00000569020 PMCHL2Q9BQD1 86 aa7.8□□□□□ -1.16
CNOT1-215ENST00000569020 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
CNOT1-215ENST00000569020 NCR3O14931 201 aa7.79□□□□□ -1.16
CNOT1-215ENST00000569020 LEPROTO15243 131 aa7.79□□□□□ -1.16
CNOT1-215ENST00000569020 IGKCP01834 107 aa7.79□□□□□ -1.16
CNOT1-215ENST00000569020 LINC00337Q8N6G1 96 aa7.79□□□□□ -1.16
CNOT1-215ENST00000569020 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 MYMXA0A1B0GTQ4 84 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 LINC00587B1AMM8 73 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 S100A12P80511 92 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 MIR7-3HGQ8N6C7 128 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 Q8NBF4 154 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 MAP1LC3CQ9BXW4 147 aa7.78□□□□□ -1.16
CNOT1-215ENST00000569020 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
CNOT1-215ENST00000569020 SPRR1AP35321 89 aa7.77□□□□□ -1.17
CNOT1-215ENST00000569020 HERVK_113P61574 105 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms