RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 COL12A1Q99715 3063 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 LOC107984640A0A0U1RRK4 108 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 NDUFC1O43677 76 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 ZNF73O43830 326 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-250ENST00000568290 SLPIP03973 132 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 HTN3P15516 51 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 Q6ZQT0 140 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 C1orf43Q9BWL3 253 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 CELSR1Q9NYQ6 3014 aa5.19□□□□□ -1.58
ATXN3-250ENST00000568290 NANOS2P60321 138 aaKnown RBP5.18□□□□□ -1.58
ATXN3-250ENST00000568290 UNQ6190/PRO20217Q6UXQ8 127 aa5.18□□□□□ -1.58
ATXN3-250ENST00000568290 MXRA5Q9NR99 2828 aa5.18□□□□□ -1.58
ATXN3-250ENST00000568290 TEX15Q9BXT5 2789 aa5.17□□□□□ -1.58
ATXN3-250ENST00000568290 RELNP78509 3460 aa5.17□□□□□ -1.58
ATXN3-250ENST00000568290 TLN2Q9Y4G6 2542 aa5.17□□□□□ -1.58
ATXN3-250ENST00000568290 TRAV7A0A075B6U4 112 aa5.17□□□□□ -1.58
ATXN3-250ENST00000568290 ATP5EP56381 51 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-250ENST00000568290 ELOF1P60002 83 aaKnown RBP5.17□□□□□ -1.58
ATXN3-250ENST00000568290 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
ATXN3-250ENST00000568290 UPK3BQ9BT76 320 aa5.17□□□□□ -1.58
ATXN3-250ENST00000568290 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
ATXN3-250ENST00000568290 Q6ZQY7 126 aa5.16□□□□□ -1.58
ATXN3-250ENST00000568290 NKAPP1Q8N9T2 125 aa5.16□□□□□ -1.58
ATXN3-250ENST00000568290 DHRS4-AS1Q9P1J3 65 aa5.16□□□□□ -1.58
ATXN3-250ENST00000568290 HIVEP2P31629 2446 aa5.15□□□□□ -1.58
ATXN3-250ENST00000568290 KRTAP10-3P60369 221 aa5.15□□□□□ -1.59
ATXN3-250ENST00000568290 LINC01556Q5JQF7 62 aa5.15□□□□□ -1.59
ATXN3-250ENST00000568290 KPRPQ5T749 579 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-250ENST00000568290 ENHOQ6UWT2 76 aa5.15□□□□□ -1.59
ATXN3-250ENST00000568290 POLQO75417 2590 aa5.15□□□□□ -1.59
ATXN3-250ENST00000568290 CHD6Q8TD26 2715 aa5.15□□□□□ -1.59
ATXN3-250ENST00000568290 WNK1Q9H4A3 2382 aa5.14□□□□□ -1.59
ATXN3-250ENST00000568290 ITPR3Q14573 2671 aa5.14□□□□□ -1.59
ATXN3-250ENST00000568290 HAMPP81172 84 aa5.14□□□□□ -1.59
ATXN3-250ENST00000568290 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-250ENST00000568290 SPATA3Q8NHX4 192 aa5.14□□□□□ -1.59
ATXN3-250ENST00000568290 C6orf48Q9UBA6 75 aa5.14□□□□□ -1.59
ATXN3-250ENST00000568290 ABCA12Q86UK0 2595 aa5.14□□□□□ -1.59
ATXN3-250ENST00000568290 USP24Q9UPU5 2620 aa5.14□□□□□ -1.59
ATXN3-250ENST00000568290 MAP1AP78559 2803 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-250ENST00000568290 CELSR2Q9HCU4 2923 aa5.13□□□□□ -1.59
ATXN3-250ENST00000568290 TRBV7-4A0A0J9YYF1 115 aa5.13□□□□□ -1.59
ATXN3-250ENST00000568290 INAFM1C9JVW0 142 aa5.13□□□□□ -1.59
ATXN3-250ENST00000568290 DEFB4AO15263 64 aa5.13□□□□□ -1.59
ATXN3-250ENST00000568290 FUSP35637 526 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-250ENST00000568290 LINC01547P58512 204 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-250ENST00000568290 PRR3P79522 188 aaKnown RBP5.13□□□□□ -1.59
ATXN3-250ENST00000568290 SYCNQ0VAF6 134 aa5.13□□□□□ -1.59
ATXN3-250ENST00000568290 CELA1Q9UNI1 258 aa5.13□□□□□ -1.59
ATXN3-250ENST00000568290 CSMD1Q96PZ7 3565 aa5.12□□□□□ -1.59
ATXN3-250ENST00000568290 ERC2-IT1O76042 136 aa5.12□□□□□ -1.59
ATXN3-250ENST00000568290 TLX1NBP0CAT3 122 aa5.12□□□□□ -1.59
ATXN3-250ENST00000568290 VPREB1P12018 145 aa5.12□□□□□ -1.59
ATXN3-250ENST00000568290 HIGD2BQ4VC39 106 aa5.12□□□□□ -1.59
ATXN3-250ENST00000568290 Q6ZVQ6 151 aa5.12□□□□□ -1.59
ATXN3-250ENST00000568290 EPG5Q9HCE0 2579 aa5.12□□□□□ -1.59
ATXN3-250ENST00000568290 APCP25054 2843 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 PRYO14603 147 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 NREPQ16612 68 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 C9orf129Q5T035 196 aaKnown RBP5.11□□□□□ -1.59
ATXN3-250ENST00000568290 C10orf25Q5T742 122 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 C11orf45Q8TAV5 145 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 CENPEQ02224 2701 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 ZANQ9Y493 2812 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 FBN2P35556 2912 aa5.11□□□□□ -1.59
ATXN3-250ENST00000568290 FLNAP21333 2647 aaKnown RBP5.1□□□□□ -1.59
ATXN3-250ENST00000568290 IGKV2D-24A0A075B6R9 120 aa5.1□□□□□ -1.59
ATXN3-250ENST00000568290 DEFB131BA0A096LNP1 70 aa5.1□□□□□ -1.59
ATXN3-250ENST00000568290 TRAV10A0A0B4J240 114 aa5.1□□□□□ -1.59
ATXN3-250ENST00000568290 MRAPQ8TCY5 172 aa5.1□□□□□ -1.59
ATXN3-250ENST00000568290 KCNQ1DNQ9H478 68 aa5.1□□□□□ -1.59
ATXN3-250ENST00000568290 A0A087WVE0 104 aa5.09□□□□□ -1.59
ATXN3-250ENST00000568290 ETDCA0A1B0GVM5 59 aa5.09□□□□□ -1.59
ATXN3-250ENST00000568290 DNAH10OSP0CZ25 163 aa5.09□□□□□ -1.59
ATXN3-250ENST00000568290 KLKP1Q107X0 134 aa5.09□□□□□ -1.59
ATXN3-250ENST00000568290 XAGE1AQ9HD64 81 aa5.09□□□□□ -1.59
ATXN3-250ENST00000568290 C2CD3Q4AC94 2353 aa5.09□□□□□ -1.59
ATXN3-250ENST00000568290 NOTCH3Q9UM47 2321 aa5.09□□□□□ -1.59
ATXN3-250ENST00000568290 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 Q6ZRU5 148 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 DPH3Q96FX2 82 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 SMR3AQ99954 134 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 SERP1Q9Y6X1 66 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 SONP18583 2426 aaKnown RBP5.08□□□□□ -1.6
ATXN3-250ENST00000568290 CRYBG3Q68DQ2 2970 aa5.08□□□□□ -1.6
ATXN3-250ENST00000568290 F8WEM9 126 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 BPY2O14599 106 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 C5orf47Q569G3 176 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 WFDC10BQ8IUB3 73 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 C20orf197Q8N268 126 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 C3orf56Q8N813 242 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 CCDC168Q8NDH2 2452 aa5.07□□□□□ -1.6
ATXN3-250ENST00000568290 RPL37AP8A6NKH3 93 aa5.06□□□□□ -1.6
ATXN3-250ENST00000568290 C14orf177Q52M58 125 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms