RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 SERF1AO75920 110 aa4.29□□□□□ -1.72
SMPD3-210ENST00000567811 VPREB1P12018 145 aa4.29□□□□□ -1.72
SMPD3-210ENST00000567811 IGKV2-28A0A075B6P5 120 aa4.28□□□□□ -1.72
SMPD3-210ENST00000567811 H0Y8G0 127 aa4.28□□□□□ -1.72
SMPD3-210ENST00000567811 IGKV2D-28P01615 120 aa4.28□□□□□ -1.72
SMPD3-210ENST00000567811 FABP4P15090 132 aa4.28□□□□□ -1.72
SMPD3-210ENST00000567811 UBE2AP49459 152 aa4.28□□□□□ -1.72
SMPD3-210ENST00000567811 HERV-K104P63124 156 aa4.28□□□□□ -1.72
SMPD3-210ENST00000567811 HSPB8Q9UJY1 196 aa4.28□□□□□ -1.72
SMPD3-210ENST00000567811 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
SMPD3-210ENST00000567811 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
SMPD3-210ENST00000567811 M0R378 163 aa4.27□□□□□ -1.73
SMPD3-210ENST00000567811 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
SMPD3-210ENST00000567811 CRYGAP11844 174 aa4.27□□□□□ -1.73
SMPD3-210ENST00000567811 MEIG1Q5JSS6 88 aa4.27□□□□□ -1.73
SMPD3-210ENST00000567811 NDUFA12Q9UI09 145 aa4.27□□□□□ -1.73
SMPD3-210ENST00000567811 TMEM238C9JI98 176 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 LEPROTO15243 131 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 LINC00310P59036 64 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 FAM19A1Q7Z5A9 133 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 KRTAP13-1Q8IUC0 172 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 Q8NDZ9 215 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 TYMSOSQ8TAI1 123 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 PLEKHB2Q96CS7 222 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 MAP1LC3CQ9BXW4 147 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 TMEM126AQ9H061 195 aa4.26□□□□□ -1.73
SMPD3-210ENST00000567811 DPM2O94777 84 aa4.25□□□□□ -1.73
SMPD3-210ENST00000567811 IGKCP01834 107 aa4.25□□□□□ -1.73
SMPD3-210ENST00000567811 PLNP26678 52 aa4.25□□□□□ -1.73
SMPD3-210ENST00000567811 BOD1L2Q8IYS8 172 aa4.25□□□□□ -1.73
SMPD3-210ENST00000567811 MIR7-3HGQ8N6C7 128 aa4.25□□□□□ -1.73
SMPD3-210ENST00000567811 ANAPC11Q9NYG5 84 aa4.25□□□□□ -1.73
SMPD3-210ENST00000567811 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 A0A087X002 238 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 J3QQQ9 107 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 TSPAN13O95857 204 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 HERVK_113P61574 105 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 PRLHP81277 87 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 PMCHL2Q9BQD1 86 aa4.24□□□□□ -1.73
SMPD3-210ENST00000567811 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
SMPD3-210ENST00000567811 LOC107984156A0A0G2JMH3 177 aa4.23□□□□□ -1.73
SMPD3-210ENST00000567811 LGALS3P17931 250 aaKnown RBP4.23□□□□□ -1.73
SMPD3-210ENST00000567811 NMUP48645 174 aa4.23□□□□□ -1.73
SMPD3-210ENST00000567811 ARL17AQ8IVW1 177 aa4.23□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BKO60814 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BJP06899 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BOP23527 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BBP33778 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BDP58876 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 TSPEAR-AS2P59090 65 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BCP62807 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 S100A12P80511 92 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 PRR4Q16378 134 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST2H2BEQ16778 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BHQ93079 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BNQ99877 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIST1H2BMQ99879 126 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 HIGD2AQ9BW72 106 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 KCNQ1DNQ9H478 68 aa4.22□□□□□ -1.73
SMPD3-210ENST00000567811 SYS1-DBNDD2H3BUS1 97 aa4.21□□□□□ -1.74
SMPD3-210ENST00000567811 PRYO14603 147 aa4.21□□□□□ -1.74
SMPD3-210ENST00000567811 NCR3O14931 201 aa4.21□□□□□ -1.74
SMPD3-210ENST00000567811 KRTAP13-2Q52LG2 175 aa4.21□□□□□ -1.74
SMPD3-210ENST00000567811 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
SMPD3-210ENST00000567811 DAND5Q8N907 189 aa4.21□□□□□ -1.74
SMPD3-210ENST00000567811 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
SMPD3-210ENST00000567811 TRBV10-3A0A0K0K1G6 114 aa4.2□□□□□ -1.74
SMPD3-210ENST00000567811 TRBV10-2A0A0K0K1G8 114 aa4.2□□□□□ -1.74
SMPD3-210ENST00000567811 E9PLD3 99 aa4.2□□□□□ -1.74
SMPD3-210ENST00000567811 SPRR1AP35321 89 aa4.2□□□□□ -1.74
SMPD3-210ENST00000567811 PET117Q6UWS5 81 aa4.2□□□□□ -1.74
SMPD3-210ENST00000567811 MIEN1Q9BRT3 115 aa4.2□□□□□ -1.74
SMPD3-210ENST00000567811 LRP2P98164 4655 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 ETDCA0A1B0GVM5 59 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 KRTAP4-16G5E9R7 235 aaPredicted RBP4.19□□□□□ -1.74
SMPD3-210ENST00000567811 NDUFC2O95298 119 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 DDTP30046 118 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 CTAG1AP78358 180 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 C4orf48Q5BLP8 95 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 ADAMTSL4-AS1Q5T5F5 129 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 LINC00304Q8N9R0 145 aa4.19□□□□□ -1.74
SMPD3-210ENST00000567811 ZNF706Q9Y5V0 76 aaPredicted RBP4.19□□□□□ -1.74
SMPD3-210ENST00000567811 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
SMPD3-210ENST00000567811 LINC01545Q5VT33 79 aa4.18□□□□□ -1.74
SMPD3-210ENST00000567811 SPRR4Q96PI1 79 aa4.18□□□□□ -1.74
SMPD3-210ENST00000567811 LPAP08519 4548 aa4.17□□□□□ -1.74
SMPD3-210ENST00000567811 B5MCH6 92 aa4.17□□□□□ -1.74
SMPD3-210ENST00000567811 C3orf79P0CE67 100 aa4.17□□□□□ -1.74
SMPD3-210ENST00000567811 NPC2P61916 151 aa4.17□□□□□ -1.74
SMPD3-210ENST00000567811 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
SMPD3-210ENST00000567811 SPAG11AQ6PDA7 123 aa4.17□□□□□ -1.74
SMPD3-210ENST00000567811 C3orf22Q8N5N4 141 aa4.17□□□□□ -1.74
SMPD3-210ENST00000567811 SPANXB1Q9NS25 103 aaPredicted RBP4.17□□□□□ -1.74
SMPD3-210ENST00000567811 EIF4EBP3O60516 100 aaPredicted RBP4.16□□□□□ -1.74
SMPD3-210ENST00000567811 IGLV6-57P01721 117 aa4.16□□□□□ -1.74
SMPD3-210ENST00000567811 SOSTDC1Q6X4U4 206 aa4.16□□□□□ -1.74
SMPD3-210ENST00000567811 PPDPFQ9H3Y8 114 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms