RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 PLNP26678 52 aa6.67□□□□□ -1.34
CDH3-206ENST00000567674 ARL17AQ8IVW1 177 aa6.67□□□□□ -1.34
CDH3-206ENST00000567674 MYMXA0A1B0GTQ4 84 aa6.66□□□□□ -1.34
CDH3-206ENST00000567674 RPL37AP8A6NKH3 93 aa6.66□□□□□ -1.34
CDH3-206ENST00000567674 TRGC2P03986 189 aa6.66□□□□□ -1.34
CDH3-206ENST00000567674 UBE2AP49459 152 aa6.66□□□□□ -1.34
CDH3-206ENST00000567674 M0R378 163 aa6.65□□□□□ -1.34
CDH3-206ENST00000567674 ATP6V1G1O75348 118 aa6.65□□□□□ -1.34
CDH3-206ENST00000567674 NMUP48645 174 aa6.65□□□□□ -1.34
CDH3-206ENST00000567674 LINC00158P58513 81 aa6.65□□□□□ -1.34
CDH3-206ENST00000567674 CBLN2Q8IUK8 224 aa6.65□□□□□ -1.34
CDH3-206ENST00000567674 TMEM126AQ9H061 195 aa6.65□□□□□ -1.34
CDH3-206ENST00000567674 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.35
CDH3-206ENST00000567674 S100A12P80511 92 aa6.64□□□□□ -1.35
CDH3-206ENST00000567674 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
CDH3-206ENST00000567674 COLCA2A8K830 154 aa6.63□□□□□ -1.35
CDH3-206ENST00000567674 LEPROTO15243 131 aa6.63□□□□□ -1.35
CDH3-206ENST00000567674 HERVK_113P61574 105 aa6.63□□□□□ -1.35
CDH3-206ENST00000567674 NDUFA12Q9UI09 145 aa6.63□□□□□ -1.35
CDH3-206ENST00000567674 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
CDH3-206ENST00000567674 GAGE10A6NGK3 116 aa6.62□□□□□ -1.35
CDH3-206ENST00000567674 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
CDH3-206ENST00000567674 FAM19A2Q8N3H0 131 aa6.62□□□□□ -1.35
CDH3-206ENST00000567674 TYMSOSQ8TAI1 123 aa6.62□□□□□ -1.35
CDH3-206ENST00000567674 TRBV10-2A0A0K0K1G8 114 aa6.61□□□□□ -1.35
CDH3-206ENST00000567674 A0A0U1RQV1 116 aa6.61□□□□□ -1.35
CDH3-206ENST00000567674 SERF1AO75920 110 aa6.61□□□□□ -1.35
CDH3-206ENST00000567674 DPM2O94777 84 aa6.61□□□□□ -1.35
CDH3-206ENST00000567674 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
CDH3-206ENST00000567674 LINC00337Q8N6G1 96 aa6.61□□□□□ -1.35
CDH3-206ENST00000567674 KCNQ1DNQ9H478 68 aa6.61□□□□□ -1.35
CDH3-206ENST00000567674 ZNF706Q9Y5V0 76 aaPredicted RBP6.61□□□□□ -1.35
CDH3-206ENST00000567674 PRYO14603 147 aa6.6□□□□□ -1.35
CDH3-206ENST00000567674 SPRR1AP35321 89 aa6.6□□□□□ -1.35
CDH3-206ENST00000567674 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
CDH3-206ENST00000567674 CBY1Q9Y3M2 126 aa6.6□□□□□ -1.35
CDH3-206ENST00000567674 MUC2Q02817 5179 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 A0A087X002 238 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 NDUFC2O95298 119 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 IGKCP01834 107 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 LINC00310P59036 64 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 SPAG11AQ6PDA7 123 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 MIR7-3HGQ8N6C7 128 aa6.59□□□□□ -1.35
CDH3-206ENST00000567674 J3QQQ9 107 aa6.58□□□□□ -1.36
CDH3-206ENST00000567674 BOD1L2Q8IYS8 172 aa6.58□□□□□ -1.36
CDH3-206ENST00000567674 SLC7A5P1Q8MH63 180 aa6.57□□□□□ -1.36
CDH3-206ENST00000567674 C5orf52A6NGY3 159 aa6.56□□□□□ -1.36
CDH3-206ENST00000567674 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
CDH3-206ENST00000567674 E9PLD3 99 aa6.56□□□□□ -1.36
CDH3-206ENST00000567674 AKR1D1P51857 326 aa6.56□□□□□ -1.36
CDH3-206ENST00000567674 Q8NDZ9 215 aa6.56□□□□□ -1.36
CDH3-206ENST00000567674 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
CDH3-206ENST00000567674 SCO1O75880 301 aa6.55□□□□□ -1.36
CDH3-206ENST00000567674 LGALS3P17931 250 aaKnown RBP6.55□□□□□ -1.36
CDH3-206ENST00000567674 PRLHP81277 87 aa6.55□□□□□ -1.36
CDH3-206ENST00000567674 KRTAP13-2Q52LG2 175 aa6.55□□□□□ -1.36
CDH3-206ENST00000567674 MIEN1Q9BRT3 115 aa6.55□□□□□ -1.36
CDH3-206ENST00000567674 SPANXB1Q9NS25 103 aaPredicted RBP6.55□□□□□ -1.36
CDH3-206ENST00000567674 FABP4P15090 132 aa6.54□□□□□ -1.36
CDH3-206ENST00000567674 PET117Q6UWS5 81 aa6.54□□□□□ -1.36
CDH3-206ENST00000567674 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
CDH3-206ENST00000567674 LPAP08519 4548 aa6.54□□□□□ -1.36
CDH3-206ENST00000567674 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
CDH3-206ENST00000567674 ETDCA0A1B0GVM5 59 aa6.53□□□□□ -1.36
CDH3-206ENST00000567674 H0Y8G0 127 aa6.53□□□□□ -1.36
CDH3-206ENST00000567674 TIMM17BO60830 172 aa6.53□□□□□ -1.36
CDH3-206ENST00000567674 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
CDH3-206ENST00000567674 PRR4Q16378 134 aa6.53□□□□□ -1.36
CDH3-206ENST00000567674 COA6Q5JTJ3 125 aaKnown RBP6.53□□□□□ -1.36
CDH3-206ENST00000567674 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
CDH3-206ENST00000567674 SYS1-DBNDD2H3BUS1 97 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BKO60814 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BJP06899 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BOP23527 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 DDTP30046 118 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BBP33778 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BDP58876 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BCP62807 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST2H2BEQ16778 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.52□□□□□ -1.37
CDH3-206ENST00000567674 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BHQ93079 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BNQ99877 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIST1H2BMQ99879 126 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
CDH3-206ENST00000567674 TRBV10-3A0A0K0K1G6 114 aa6.51□□□□□ -1.37
CDH3-206ENST00000567674 IGLV6-57P01721 117 aa6.51□□□□□ -1.37
CDH3-206ENST00000567674 TSPEAR-AS2P59090 65 aa6.51□□□□□ -1.37
CDH3-206ENST00000567674 LINC00483Q53H64 154 aa6.51□□□□□ -1.37
CDH3-206ENST00000567674 LINC01545Q5VT33 79 aa6.51□□□□□ -1.37
CDH3-206ENST00000567674 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
CDH3-206ENST00000567674 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
CDH3-206ENST00000567674 A0A0J9YXY3 114 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 B5MCH6 92 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 NCR3O14931 201 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 TSPAN13O95857 204 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 HINT1P49773 126 aaPredicted RBP6.49□□□□□ -1.37
CDH3-206ENST00000567674 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 S100A7L2Q5SY68 101 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms