RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 RNF151Q2KHN1 245 aa7.16□□□□□ -1.26
VPS9D1-206ENST00000567379 CASC10Q5T4H9 136 aa7.16□□□□□ -1.26
VPS9D1-206ENST00000567379 KRTAP1-5Q9BYS1 174 aa7.16□□□□□ -1.26
VPS9D1-206ENST00000567379 IGKV2-28A0A075B6P5 120 aa7.15□□□□□ -1.26
VPS9D1-206ENST00000567379 IGKV2D-28P01615 120 aa7.15□□□□□ -1.26
VPS9D1-206ENST00000567379 CARD19Q96LW7 228 aa7.15□□□□□ -1.26
VPS9D1-206ENST00000567379 TRIAP1O43715 76 aa7.14□□□□□ -1.27
VPS9D1-206ENST00000567379 LINC00337Q8N6G1 96 aa7.14□□□□□ -1.27
VPS9D1-206ENST00000567379 OR13C6PQ8NH95 151 aa7.14□□□□□ -1.27
VPS9D1-206ENST00000567379 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
VPS9D1-206ENST00000567379 C14orf177Q52M58 125 aa7.13□□□□□ -1.27
VPS9D1-206ENST00000567379 LYSTQ99698 3801 aa7.13□□□□□ -1.27
VPS9D1-206ENST00000567379 LECT2O14960 151 aa7.12□□□□□ -1.27
VPS9D1-206ENST00000567379 TCL1BO95988 128 aa7.12□□□□□ -1.27
VPS9D1-206ENST00000567379 ATXN8Q156A1 80 aa7.12□□□□□ -1.27
VPS9D1-206ENST00000567379 H3BMG7 143 aa7.11□□□□□ -1.27
VPS9D1-206ENST00000567379 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 NCR3O14931 201 aa7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 TLX1NBP0CAT3 122 aa7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 RPL28P46779 137 aaKnown RBP7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 GAGE2EQ4V326 116 aa7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 XAGE1AQ9HD64 81 aa7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 GAGE2DQ9UEU5 116 aa7.1□□□□□ -1.27
VPS9D1-206ENST00000567379 F8W1H4 67 aa7.09□□□□□ -1.27
VPS9D1-206ENST00000567379 SLPIP03973 132 aa7.09□□□□□ -1.27
VPS9D1-206ENST00000567379 PRR3P79522 188 aaKnown RBP7.09□□□□□ -1.27
VPS9D1-206ENST00000567379 RPL18AQ02543 176 aaKnown RBP7.09□□□□□ -1.27
VPS9D1-206ENST00000567379 S100A7L2Q5SY68 101 aa7.09□□□□□ -1.27
VPS9D1-206ENST00000567379 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
VPS9D1-206ENST00000567379 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
VPS9D1-206ENST00000567379 LOC107984640A0A0U1RRK4 108 aa7.08□□□□□ -1.28
VPS9D1-206ENST00000567379 M0R2N4 97 aa7.08□□□□□ -1.28
VPS9D1-206ENST00000567379 Q6ZRP5 223 aa7.08□□□□□ -1.28
VPS9D1-206ENST00000567379 WFDC2Q14508 124 aa7.07□□□□□ -1.28
VPS9D1-206ENST00000567379 Q8NDZ9 215 aa7.07□□□□□ -1.28
VPS9D1-206ENST00000567379 CLEC2BQ92478 149 aa7.07□□□□□ -1.28
VPS9D1-206ENST00000567379 H0YGX0 51 aa7.06□□□□□ -1.28
VPS9D1-206ENST00000567379 M0R378 163 aa7.06□□□□□ -1.28
VPS9D1-206ENST00000567379 LST1O00453 97 aa7.06□□□□□ -1.28
VPS9D1-206ENST00000567379 VPREB1P12018 145 aa7.06□□□□□ -1.28
VPS9D1-206ENST00000567379 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
VPS9D1-206ENST00000567379 LINC01620Q4KN68 170 aa7.06□□□□□ -1.28
VPS9D1-206ENST00000567379 C9JAW5 83 aa7.05□□□□□ -1.28
VPS9D1-206ENST00000567379 Q6ZRN7 208 aaPredicted RBP7.05□□□□□ -1.28
VPS9D1-206ENST00000567379 PRO0461Q9UI25 63 aa7.05□□□□□ -1.28
VPS9D1-206ENST00000567379 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
VPS9D1-206ENST00000567379 CBY1Q9Y3M2 126 aa7.05□□□□□ -1.28
VPS9D1-206ENST00000567379 LRCOL1A6NCL2 159 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 LY6G6CO95867 125 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 IGLV6-57P01721 117 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 GAGE2BQ13066 116 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 C9orf129Q5T035 196 aaKnown RBP7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 Q6ZR54 194 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 MTURNQ8N3F0 131 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
VPS9D1-206ENST00000567379 TRACP01848 142 aa7.03□□□□□ -1.28
VPS9D1-206ENST00000567379 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.02□□□□□ -1.29
VPS9D1-206ENST00000567379 TRBV10-3A0A0K0K1G6 114 aa7.02□□□□□ -1.29
VPS9D1-206ENST00000567379 M0QXV9 152 aa7.02□□□□□ -1.29
VPS9D1-206ENST00000567379 SLC25A20O43772 301 aa7.02□□□□□ -1.29
VPS9D1-206ENST00000567379 LINC00476Q8WZB0 136 aa7.02□□□□□ -1.29
VPS9D1-206ENST00000567379 STARD9Q9P2P6 4700 aa7.02□□□□□ -1.29
VPS9D1-206ENST00000567379 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
VPS9D1-206ENST00000567379 SNCGO76070 127 aa7.01□□□□□ -1.29
VPS9D1-206ENST00000567379 SMCPP49901 116 aaPredicted RBP7.01□□□□□ -1.29
VPS9D1-206ENST00000567379 C1orf134Q5TEV5 83 aa7.01□□□□□ -1.29
VPS9D1-206ENST00000567379 CSMD3Q7Z407 3707 aa7.01□□□□□ -1.29
VPS9D1-206ENST00000567379 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
VPS9D1-206ENST00000567379 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
VPS9D1-206ENST00000567379 TRAV23DV6A0A075B6W5 121 aa7□□□□□ -1.29
VPS9D1-206ENST00000567379 H3BT86 120 aa7□□□□□ -1.29
VPS9D1-206ENST00000567379 C6orf99Q4VX62 202 aa7□□□□□ -1.29
VPS9D1-206ENST00000567379 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
VPS9D1-206ENST00000567379 FAM218AQ96MZ4 157 aa7□□□□□ -1.29
VPS9D1-206ENST00000567379 A0A087WTM6 91 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 A0A1B0GX51 115 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 C16orf90A8MZG2 172 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 DNAL4O96015 105 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 ETDBQ3ZM63 59 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 SERTAD4-AS1Q5TG53 156 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 Q8N814 137 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 DIRC1Q969H9 104 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 LINC01600Q96MT4 127 aa6.99□□□□□ -1.29
VPS9D1-206ENST00000567379 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
VPS9D1-206ENST00000567379 C9orf163Q8N9P6 203 aa6.98□□□□□ -1.29
VPS9D1-206ENST00000567379 C7orf33Q8WU49 177 aa6.98□□□□□ -1.29
VPS9D1-206ENST00000567379 A0A087WYN8 130 aa6.97□□□□□ -1.29
VPS9D1-206ENST00000567379 A0A096LNI7 61 aa6.97□□□□□ -1.29
VPS9D1-206ENST00000567379 TRBV7-6A0A0J9YX20 115 aa6.97□□□□□ -1.29
VPS9D1-206ENST00000567379 ZNF73O43830 326 aaPredicted RBP6.97□□□□□ -1.29
VPS9D1-206ENST00000567379 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
VPS9D1-206ENST00000567379 TEN1Q86WV5 123 aa6.97□□□□□ -1.29
VPS9D1-206ENST00000567379 FRAS1Q86XX4 4008 aa6.96□□□□□ -1.29
VPS9D1-206ENST00000567379 IGKV2-24A0A0C4DH68 120 aa6.96□□□□□ -1.3
VPS9D1-206ENST00000567379 FAM168BA1KXE4 195 aa6.96□□□□□ -1.3
VPS9D1-206ENST00000567379 K7ERU9 68 aa6.96□□□□□ -1.3
VPS9D1-206ENST00000567379 BAALC-AS2P0C853 105 aa6.96□□□□□ -1.3
VPS9D1-206ENST00000567379 FAM19A5Q7Z5A7 132 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms