RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TRIAP1O43715 76 aa11.17□□□□□ -0.62
RAB40C-210ENST00000566290 Q1RN00 199 aa11.17□□□□□ -0.62
RAB40C-210ENST00000566290 RMI2Q96E14 147 aa11.17□□□□□ -0.62
RAB40C-210ENST00000566290 DNAH17Q9UFH2 4485 aa11.16□□□□□ -0.62
RAB40C-210ENST00000566290 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
RAB40C-210ENST00000566290 H3BMG7 143 aa11.16□□□□□ -0.62
RAB40C-210ENST00000566290 PSMB2P49721 201 aa11.16□□□□□ -0.62
RAB40C-210ENST00000566290 TCL1BO95988 128 aa11.15□□□□□ -0.62
RAB40C-210ENST00000566290 PFN2P35080 140 aa11.15□□□□□ -0.62
RAB40C-210ENST00000566290 DNAH6Q9C0G6 4158 aa11.15□□□□□ -0.63
RAB40C-210ENST00000566290 HERC1Q15751 4861 aa11.14□□□□□ -0.63
RAB40C-210ENST00000566290 IGKV2-28A0A075B6P5 120 aa11.14□□□□□ -0.63
RAB40C-210ENST00000566290 IGKV2D-28P01615 120 aa11.14□□□□□ -0.63
RAB40C-210ENST00000566290 RPL28P46779 137 aaKnown RBP11.14□□□□□ -0.63
RAB40C-210ENST00000566290 ATXN8Q156A1 80 aa11.14□□□□□ -0.63
RAB40C-210ENST00000566290 C15orf56Q8N910 161 aa11.14□□□□□ -0.63
RAB40C-210ENST00000566290 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
RAB40C-210ENST00000566290 ZNF561-AS1K7EIQ3 104 aa11.12□□□□□ -0.63
RAB40C-210ENST00000566290 LINC00337Q8N6G1 96 aa11.12□□□□□ -0.63
RAB40C-210ENST00000566290 LST1O00453 97 aa11.11□□□□□ -0.63
RAB40C-210ENST00000566290 RNF151Q2KHN1 245 aa11.11□□□□□ -0.63
RAB40C-210ENST00000566290 UNQ6190/PRO20217Q6UXQ8 127 aa11.11□□□□□ -0.63
RAB40C-210ENST00000566290 IGKV2D-24A0A075B6R9 120 aa11.09□□□□□ -0.63
RAB40C-210ENST00000566290 TRBV10-2A0A0K0K1G8 114 aa11.09□□□□□ -0.63
RAB40C-210ENST00000566290 H7C2G1 150 aa11.09□□□□□ -0.63
RAB40C-210ENST00000566290 C10orf25Q5T742 122 aa11.09□□□□□ -0.63
RAB40C-210ENST00000566290 CARD19Q96LW7 228 aa11.09□□□□□ -0.63
RAB40C-210ENST00000566290 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
RAB40C-210ENST00000566290 HSPG2P98160 4391 aa11.08□□□□□ -0.64
RAB40C-210ENST00000566290 A0A1B0GVY2 172 aa11.08□□□□□ -0.64
RAB40C-210ENST00000566290 K7ERU9 68 aa11.08□□□□□ -0.64
RAB40C-210ENST00000566290 LINC01620Q4KN68 170 aa11.08□□□□□ -0.64
RAB40C-210ENST00000566290 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
RAB40C-210ENST00000566290 C6orf223Q8N319 242 aa11.08□□□□□ -0.64
RAB40C-210ENST00000566290 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
RAB40C-210ENST00000566290 PKD1P98161 4303 aa11.06□□□□□ -0.64
RAB40C-210ENST00000566290 H3BT86 120 aa11.06□□□□□ -0.64
RAB40C-210ENST00000566290 TRACP01848 142 aa11.06□□□□□ -0.64
RAB40C-210ENST00000566290 H0YGX0 51 aa11.05□□□□□ -0.64
RAB40C-210ENST00000566290 TLX1NBP0CAT3 122 aa11.05□□□□□ -0.64
RAB40C-210ENST00000566290 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
RAB40C-210ENST00000566290 TMEM126AQ9H061 195 aa11.05□□□□□ -0.64
RAB40C-210ENST00000566290 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
RAB40C-210ENST00000566290 WFDC2Q14508 124 aa11.04□□□□□ -0.64
RAB40C-210ENST00000566290 SLC25A20O43772 301 aa11.03□□□□□ -0.64
RAB40C-210ENST00000566290 C9orf116Q5BN46 136 aaPredicted RBP11.03□□□□□ -0.64
RAB40C-210ENST00000566290 SYCNQ0VAF6 134 aa11.02□□□□□ -0.65
RAB40C-210ENST00000566290 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.65
RAB40C-210ENST00000566290 TTC32Q5I0X7 151 aa11.02□□□□□ -0.65
RAB40C-210ENST00000566290 Q6ZRU5 148 aa11.02□□□□□ -0.65
RAB40C-210ENST00000566290 TEN1Q86WV5 123 aa11.02□□□□□ -0.65
RAB40C-210ENST00000566290 SMIM11BQ8TCY0 68 aa11.02□□□□□ -0.65
RAB40C-210ENST00000566290 A0A1B0GX51 115 aa11.01□□□□□ -0.65
RAB40C-210ENST00000566290 Q9HAA7 133 aa11.01□□□□□ -0.65
RAB40C-210ENST00000566290 C9JAW5 83 aa11□□□□□ -0.65
RAB40C-210ENST00000566290 J3QR89 54 aa11□□□□□ -0.65
RAB40C-210ENST00000566290 M0R2N4 97 aa11□□□□□ -0.65
RAB40C-210ENST00000566290 ANKRD29Q8N6D5 301 aa11□□□□□ -0.65
RAB40C-210ENST00000566290 LINC00526Q96FQ7 95 aa11□□□□□ -0.65
RAB40C-210ENST00000566290 ETDBQ3ZM63 59 aa10.99□□□□□ -0.65
RAB40C-210ENST00000566290 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
RAB40C-210ENST00000566290 UBE2DNLQ8IWF7 75 aa10.99□□□□□ -0.65
RAB40C-210ENST00000566290 CBY1Q9Y3M2 126 aa10.99□□□□□ -0.65
RAB40C-210ENST00000566290 USP17L23D6RBM5 183 aa10.98□□□□□ -0.65
RAB40C-210ENST00000566290 CLEC2BQ92478 149 aa10.98□□□□□ -0.65
RAB40C-210ENST00000566290 IGLV6-57P01721 117 aa10.97□□□□□ -0.65
RAB40C-210ENST00000566290 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
RAB40C-210ENST00000566290 PPDPFLQ8WWR9 84 aa10.96□□□□□ -0.65
RAB40C-210ENST00000566290 VPREB1P12018 145 aa10.95□□□□□ -0.66
RAB40C-210ENST00000566290 Q8NDZ9 215 aa10.95□□□□□ -0.66
RAB40C-210ENST00000566290 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
RAB40C-210ENST00000566290 C14orf177Q52M58 125 aa10.94□□□□□ -0.66
RAB40C-210ENST00000566290 Q6ZR54 194 aa10.94□□□□□ -0.66
RAB40C-210ENST00000566290 KRTAP1-5Q9BYS1 174 aa10.94□□□□□ -0.66
RAB40C-210ENST00000566290 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
RAB40C-210ENST00000566290 MTURNQ8N3F0 131 aa10.93□□□□□ -0.66
RAB40C-210ENST00000566290 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
RAB40C-210ENST00000566290 TRBV7-6A0A0J9YX20 115 aa10.92□□□□□ -0.66
RAB40C-210ENST00000566290 RTL8CO15255 209 aa10.92□□□□□ -0.66
RAB40C-210ENST00000566290 S100A7L2Q5SY68 101 aa10.92□□□□□ -0.66
RAB40C-210ENST00000566290 LINC00167Q96N53 147 aa10.92□□□□□ -0.66
RAB40C-210ENST00000566290 M0R378 163 aa10.91□□□□□ -0.66
RAB40C-210ENST00000566290 Q6ZRP5 223 aa10.91□□□□□ -0.66
RAB40C-210ENST00000566290 FAM218AQ96MZ4 157 aa10.91□□□□□ -0.66
RAB40C-210ENST00000566290 NBDYA0A0U1RRE5 68 aa10.9□□□□□ -0.66
RAB40C-210ENST00000566290 NCR3O14931 201 aa10.9□□□□□ -0.66
RAB40C-210ENST00000566290 PKIGQ9Y2B9 76 aa10.9□□□□□ -0.66
RAB40C-210ENST00000566290 SLPIP03973 132 aa10.89□□□□□ -0.67
RAB40C-210ENST00000566290 XAGE1AQ9HD64 81 aa10.89□□□□□ -0.67
RAB40C-210ENST00000566290 LRP1BQ9NZR2 4599 aa10.89□□□□□ -0.67
RAB40C-210ENST00000566290 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
RAB40C-210ENST00000566290 RPL18AQ02543 176 aaKnown RBP10.88□□□□□ -0.67
RAB40C-210ENST00000566290 APOBP04114 4563 aaKnown RBP10.87□□□□□ -0.67
RAB40C-210ENST00000566290 LOC107984640A0A0U1RRK4 108 aa10.87□□□□□ -0.67
RAB40C-210ENST00000566290 SNCGO76070 127 aa10.87□□□□□ -0.67
RAB40C-210ENST00000566290 DNAL4O96015 105 aa10.87□□□□□ -0.67
RAB40C-210ENST00000566290 C9orf129Q5T035 196 aaKnown RBP10.86□□□□□ -0.67
RAB40C-210ENST00000566290 TRAV23DV6A0A075B6W5 121 aa10.85□□□□□ -0.67
RAB40C-210ENST00000566290 H3BQ85 93 aa10.85□□□□□ -0.67
RAB40C-210ENST00000566290 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms