RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CXCL5P42830 114 aa5.03□□□□□ -1.6
CAPN3-213ENST00000565173 RPL28P46779 137 aaKnown RBP5.03□□□□□ -1.6
CAPN3-213ENST00000565173 KRTAP13-1Q8IUC0 172 aa5.03□□□□□ -1.6
CAPN3-213ENST00000565173 ANAPC11Q9NYG5 84 aa5.03□□□□□ -1.6
CAPN3-213ENST00000565173 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 C11orf86A6NJI1 115 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 SPINK8P0C7L1 97 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 CRYGAP11844 174 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 ZNF22P17026 224 aaPredicted RBP5.02□□□□□ -1.61
CAPN3-213ENST00000565173 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 COA6Q5JTJ3 125 aaKnown RBP5.02□□□□□ -1.61
CAPN3-213ENST00000565173 TMEM170BQ5T4T1 132 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 TYMSOSQ8TAI1 123 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 COX7B2Q8TF08 81 aa5.02□□□□□ -1.61
CAPN3-213ENST00000565173 GAGE10A6NGK3 116 aa5.01□□□□□ -1.61
CAPN3-213ENST00000565173 MAP1LC3CQ9BXW4 147 aa5.01□□□□□ -1.61
CAPN3-213ENST00000565173 FAT4Q6V0I7 4981 aa5.01□□□□□ -1.61
CAPN3-213ENST00000565173 S100A6P06703 90 aa5□□□□□ -1.61
CAPN3-213ENST00000565173 PMCHL2Q9BQD1 86 aa5□□□□□ -1.61
CAPN3-213ENST00000565173 LCE2AQ5TA79 106 aaPredicted RBP4.99□□□□□ -1.61
CAPN3-213ENST00000565173 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
CAPN3-213ENST00000565173 SYS1-DBNDD2H3BUS1 97 aa4.98□□□□□ -1.61
CAPN3-213ENST00000565173 DPM2O94777 84 aa4.98□□□□□ -1.61
CAPN3-213ENST00000565173 PLNP26678 52 aa4.98□□□□□ -1.61
CAPN3-213ENST00000565173 KRTDAPP60985 99 aa4.98□□□□□ -1.61
CAPN3-213ENST00000565173 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
CAPN3-213ENST00000565173 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 TMEM223A0PJW6 202 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 IGKCP01834 107 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 C3orf79P0CE67 100 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 S100A2P29034 98 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 UBE2AP49459 152 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 PET117Q6UWS5 81 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 HIST3H2BBQ8N257 126 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 RETNLBQ9BQ08 111 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
CAPN3-213ENST00000565173 A0A0U1RQV1 116 aa4.96□□□□□ -1.62
CAPN3-213ENST00000565173 VPREB1P12018 145 aa4.96□□□□□ -1.62
CAPN3-213ENST00000565173 PFN2P35080 140 aa4.96□□□□□ -1.62
CAPN3-213ENST00000565173 LINC00304Q8N9R0 145 aa4.96□□□□□ -1.62
CAPN3-213ENST00000565173 NKAPP1Q8N9T2 125 aa4.96□□□□□ -1.62
CAPN3-213ENST00000565173 Q8NDZ9 215 aa4.96□□□□□ -1.62
CAPN3-213ENST00000565173 SND1-IT1Q9HBX3 110 aa4.96□□□□□ -1.62
CAPN3-213ENST00000565173 TMEM238C9JI98 176 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 M0R378 163 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 HERVK_113P61574 105 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 SNRPEP62304 92 aaKnown RBP4.95□□□□□ -1.62
CAPN3-213ENST00000565173 PRLHP81277 87 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 LINC01545Q5VT33 79 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 PLEKHB2Q96CS7 222 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 HIST1H2BLQ99880 126 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
CAPN3-213ENST00000565173 C20orf202A1L168 122 aa4.94□□□□□ -1.62
CAPN3-213ENST00000565173 CTAG1AP78358 180 aa4.94□□□□□ -1.62
CAPN3-213ENST00000565173 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
CAPN3-213ENST00000565173 ZNF625Q96I27 306 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-213ENST00000565173 ERG28Q9UKR5 140 aa4.94□□□□□ -1.62
CAPN3-213ENST00000565173 IGKV2D-26A0A0A0MRZ7 120 aa4.93□□□□□ -1.62
CAPN3-213ENST00000565173 LEPROTO15243 131 aa4.93□□□□□ -1.62
CAPN3-213ENST00000565173 COX17Q14061 63 aa4.93□□□□□ -1.62
CAPN3-213ENST00000565173 SFTA2Q6UW10 78 aa4.93□□□□□ -1.62
CAPN3-213ENST00000565173 FAM19A1Q7Z5A9 133 aa4.93□□□□□ -1.62
CAPN3-213ENST00000565173 C3orf22Q8N5N4 141 aa4.93□□□□□ -1.62
CAPN3-213ENST00000565173 IGLV7-46A0A075B6I9 117 aa4.92□□□□□ -1.62
CAPN3-213ENST00000565173 C5orf52A6NGY3 159 aa4.92□□□□□ -1.62
CAPN3-213ENST00000565173 LGALS3P17931 250 aaKnown RBP4.92□□□□□ -1.62
CAPN3-213ENST00000565173 TSPEAR-AS2P59090 65 aa4.92□□□□□ -1.62
CAPN3-213ENST00000565173 RPL24P83731 157 aaKnown RBP4.92□□□□□ -1.62
CAPN3-213ENST00000565173 NDUFA12Q9UI09 145 aa4.92□□□□□ -1.62
CAPN3-213ENST00000565173 TMA7Q9Y2S6 64 aaKnown RBP4.92□□□□□ -1.62
CAPN3-213ENST00000565173 A0A0U1RRA0 63 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 MYMXA0A1B0GTQ4 84 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 E9PLD3 99 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 J3QQQ9 107 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 HERV-K104P63124 156 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 MEIG1Q5JSS6 88 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 ATOH7Q8N100 152 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 CDIP1Q9H305 208 aa4.91□□□□□ -1.62
CAPN3-213ENST00000565173 AKR1D1P51857 326 aa4.9□□□□□ -1.63
CAPN3-213ENST00000565173 LINC00158P58513 81 aa4.9□□□□□ -1.63
CAPN3-213ENST00000565173 PPDPFQ9H3Y8 114 aa4.9□□□□□ -1.63
CAPN3-213ENST00000565173 SMIM13P0DJ93 91 aa4.89□□□□□ -1.63
CAPN3-213ENST00000565173 NMUP48645 174 aa4.89□□□□□ -1.63
CAPN3-213ENST00000565173 SPRR4Q96PI1 79 aa4.89□□□□□ -1.63
CAPN3-213ENST00000565173 LINC00587B1AMM8 73 aa4.88□□□□□ -1.63
CAPN3-213ENST00000565173 SCGB1D1O95968 90 aa4.88□□□□□ -1.63
CAPN3-213ENST00000565173 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
CAPN3-213ENST00000565173 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
CAPN3-213ENST00000565173 ANKRD39Q53RE8 183 aa4.87□□□□□ -1.63
CAPN3-213ENST00000565173 MIR7-3HGQ8N6C7 128 aa4.87□□□□□ -1.63
CAPN3-213ENST00000565173 TTTY13Q9BZ97 58 aa4.87□□□□□ -1.63
CAPN3-213ENST00000565173 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
CAPN3-213ENST00000565173 ZNF815PA8K554 130 aa4.86□□□□□ -1.63
CAPN3-213ENST00000565173 HSBP1L1C9JCN9 74 aa4.86□□□□□ -1.63
CAPN3-213ENST00000565173 KRTAP4-16G5E9R7 235 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-213ENST00000565173 SPRR1AP35321 89 aa4.86□□□□□ -1.63
CAPN3-213ENST00000565173 KCNQ1DNQ9H478 68 aa4.86□□□□□ -1.63
CAPN3-213ENST00000565173 KRTAP13-3Q3SY46 172 aa4.85□□□□□ -1.63
CAPN3-213ENST00000565173 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms