RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 LINC00526Q96FQ7 95 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 BAALCQ8WXS3 180 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 CR1P17927 2039 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 MRPS12O15235 138 aaKnown RBP2.43□□□□□ -2.02
CHD9-213ENST00000564845 GYPEP15421 78 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 HTN3P15516 51 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 KRTAP1-3Q8IUG1 177 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 DNAH1Q9P2D7 4330 aa2.43□□□□□ -2.02
CHD9-213ENST00000564845 BAALC-AS2P0C853 105 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 LINC00269Q8N2A0 174 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 BPY2O14599 106 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 RETNQ9HD89 108 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 LST1O00453 97 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 C12orf74Q32Q52 190 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 MAP6D1Q9H9H5 199 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.42□□□□□ -2.02
CHD9-213ENST00000564845 IGKV2-29A2NJV5 120 aaPredicted RBP2.42□□□□□ -2.02
CHD9-213ENST00000564845 Q8N6K4 173 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 NDUFS5O43920 106 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 IGLV1-51P01701 117 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 GVQW2A0A096LPI5 108 aaPredicted RBP2.42□□□□□ -2.02
CHD9-213ENST00000564845 TEX49A0A1B0GTD5 131 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 RPS28P62857 69 aaKnown RBP2.42□□□□□ -2.02
CHD9-213ENST00000564845 A6NDX4 124 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 ZNF702PQ9H963 129 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 IGLV10-54A0A075B6I4 117 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 A0A0J9YY99 117 aa2.42□□□□□ -2.02
CHD9-213ENST00000564845 A0A096LNJ9 63 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 COL6A5A8TX70 2615 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 C2CD3Q4AC94 2353 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 CRYGDP07320 174 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 C9orf85Q96MD7 179 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 AMELXQ99217 191 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 C8orf87E5RJ46 101 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 CLEC2BQ92478 149 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 C14orf132Q9NPU4 83 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 LOC101927531A0A1B0GV80 90 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 LY6G6CO95867 125 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 RBX1P62877 108 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 DCANP1Q8TF63 244 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 C3orf84H3BNL1 204 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 NOP10Q9NPE3 64 aaKnown RBP2.41□□□□□ -2.02
CHD9-213ENST00000564845 CFAP126Q5VTH2 177 aa2.41□□□□□ -2.02
CHD9-213ENST00000564845 DEFB131BA0A096LNP1 70 aa2.4□□□□□ -2.02
CHD9-213ENST00000564845 WFDC9Q8NEX5 89 aa2.4□□□□□ -2.02
CHD9-213ENST00000564845 RYR1P21817 5038 aa2.4□□□□□ -2.02
CHD9-213ENST00000564845 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 MAPKAPK5-AS1Q8N8E1 139 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 U3KQE9 123 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 RNASE3P12724 160 aaKnown RBP2.4□□□□□ -2.03
CHD9-213ENST00000564845 CD164Q04900 197 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 Q6ZRP5 223 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 LINC00308Q8TCZ7 52 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 TGP01266 2768 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 M0QY20 66 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 C6orf99Q4VX62 202 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 MUC4Q99102 2169 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 FAM236AA0A1B0GUQ0 79 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 CYP4F30PQ9H0H9 118 aa2.4□□□□□ -2.03
CHD9-213ENST00000564845 A0A096LNT2 108 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 BEAN1Q3B7T3 259 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 C3orf22Q8N5N4 141 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 LINC01006Q8NI28 216 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 RYR3Q15413 4870 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 IGHV4-28A0A0C4DH34 117 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 CCKP06307 115 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 IGHV3-30-3P0DP02 117 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 LINC01556Q5JQF7 62 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 TRAV7A0A075B6U4 112 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 MGAM2Q2M2H8 2515 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 NDUFV3P56181 108 aaKnown RBP2.39□□□□□ -2.03
CHD9-213ENST00000564845 ELOF1P60002 83 aaKnown RBP2.39□□□□□ -2.03
CHD9-213ENST00000564845 Q6ZTI0 123 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 POM121L12Q8N7R1 296 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 FAM236DA0A1B0GTK5 79 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 FAM229AH3BQW9 127 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 IGHV3-30P01768 117 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 IGHV3-30-5P0DP03 117 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 FAM236CP0DP71 79 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 COX7CP15954 63 aa2.39□□□□□ -2.03
CHD9-213ENST00000564845 PLA2G1BP04054 148 aaKnown RBP2.39□□□□□ -2.03
CHD9-213ENST00000564845 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
CHD9-213ENST00000564845 DEFB135Q30KP9 77 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 SYCNQ0VAF6 134 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 IGLV5-45A0A087WSX0 123 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 TRBV7-7A0A0K0K1E9 115 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 LOC110117498A0A087WWA1 95 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 KRTAP1-1Q07627 177 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 LINC00694P0DN24 101 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 CELA1Q9UNI1 258 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 ACYP2P14621 99 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 C9orf163Q8N9P6 203 aa2.38□□□□□ -2.03
CHD9-213ENST00000564845 EPPK1P58107 5090 aaKnown RBP2.37□□□□□ -2.03
CHD9-213ENST00000564845 K7EQZ3 153 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms